Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 8eay
Q-score: 0.403
Wen X, Suryadevara N, Kose N, Liu J, Zhan X, Handal LS, Williamson LE, Trivette A, Carnahan RH, Jardetzky TS, Crowe Jr JE
Cell Host Microbe (2023) 31 pp. 1288-1300.e6 [ Pubmed: 37516111 DOI: doi:10.1016/j.chom.2023.07.002 ]
- 4i3 light chain protein (11 kDa, Protein from Homo sapiens)
- 4i3 heavy chain protein (13 kDa, Protein from Homo sapiens)
- Fusion glycoprotein f0 (45 kDa, Protein from Human metapneumovirus A)
- Mpv fusion protein complex with 4i3 fab (Complex from Human metapneumovirus)
Human nuclear pre-60S ribosomal subunit (State I3) - Composite map
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8fl4
Q-score: 0.494
Science (2023) 381 pp. eadh3892-eadh3892 [ DOI: doi:10.1126/science.adh3892 Pubmed: 37410842 ]
- 60s ribosomal protein l15 (24 kDa, Protein from human)
- 60s ribosomal protein l7-like 1 (29 kDa, Protein from human)
- Wd repeat-containing protein 18 (47 kDa, Protein from human)
- Probable ribosome biogenesis protein rlp24 (19 kDa, Protein from human)
- 60s ribosomal protein l28 (15 kDa, Protein from human)
- Protein sda1 homolog (80 kDa, Protein from human)
- 60s ribosomal protein l8 (28 kDa, Protein from human)
- Potassium ion (39 Da, Ligand)
- 60s ribosomal protein l22 (14 kDa, Protein from human)
- 60s ribosomal protein l21 (18 kDa, Protein from human)
- Human nuclear pre-60s ribosomal subunit (state i3) (Complex from Homo sapiens)
- Ribosomal biogenesis protein las1l (83 kDa, Protein from human)
- 60s ribosomal protein l11 (20 kDa, Protein from human)
- 60s ribosomal protein l14 (23 kDa, Protein from human)
- 60s ribosomal protein l19 (23 kDa, Protein from human)
- 60s ribosomal protein l31 (14 kDa, Protein from human)
- 60s ribosomal protein l37 (11 kDa, Protein from human)
- Notchless protein homolog 1 (53 kDa, Protein from human)
- 60s ribosomal protein l26 (17 kDa, Protein from human)
- 60s ribosomal protein l27a (16 kDa, Protein from human)
- 60s ribosomal protein l4 (47 kDa, Protein from human)
- 60s ribosomal protein l35 (14 kDa, Protein from human)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 60s ribosomal protein l39 (6 kDa, Protein from human)
- 60s ribosomal protein l7 (29 kDa, Protein from human)
- 60s ribosomal protein l35a (12 kDa, Protein from human)
- Protein llp homolog (15 kDa, Protein from human)
- 60s ribosomal protein l7a (30 kDa, Protein from human)
- Mrna turnover protein 4 homolog (27 kDa, Protein from human)
- Ribosome biogenesis protein nsa2 homolog (30 kDa, Protein from human)
- 60s ribosomal protein l34 (13 kDa, Protein from human)
- Ribosome biogenesis protein nop53 (54 kDa, Protein from human)
- 60s ribosomal protein l23a (17 kDa, Protein from human)
- 60s ribosomal protein l32 (15 kDa, Protein from human)
- Pescadillo homolog (68 kDa, Protein from human)
- 60s ribosomal protein l36 (12 kDa, Protein from human)
- 60s ribosomal protein l13a (23 kDa, Protein from human)
- Guanine nucleotide-binding protein-like 3 (62 kDa, Protein from human)
- 60s ribosomal protein l13 (24 kDa, Protein from human)
- 60s ribosomal protein l37a (10 kDa, Protein from human)
- 60s ribosomal protein l12 (17 kDa, Protein from human)
- 60s ribosomal protein l38 (8 kDa, Protein from human)
- 5.8s rrna (50 kDa, RNA from human)
- Coiled-coil domain-containing protein 86 (40 kDa, Protein from human)
- 60s ribosomal protein l6 (32 kDa, Protein from human)
- 60s ribosomal protein l10a (24 kDa, Protein from human)
- Proline-, glutamic acid- and leucine-rich protein 1 (119 kDa, Protein from human)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l30 (12 kDa, Protein from human)
- 60s ribosomal protein l9 (21 kDa, Protein from human)
- 60s ribosomal protein l27 (15 kDa, Protein from human)
- 60s ribosomal protein l3 (46 kDa, Protein from human)
- Gtp-binding protein 4 (74 kDa, Protein from human)
- Testis-expressed protein 10 (105 kDa, Protein from human)
- Nucleolar gtp-binding protein 2 (83 kDa, Protein from human)
- Zinc finger protein 593 (15 kDa, Protein from human)
- 60s ribosomal protein l17 (21 kDa, Protein from human)
- 60s ribosomal protein l18a (20 kDa, Protein from human)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 60s ribosomal protein l23 (14 kDa, Protein from human)
- 60s ribosomal protein l5 (34 kDa, Protein from human)
- 5s rrna (38 kDa, RNA from human)
- 28s rrna (1 MDa, RNA from human)
- 60s ribosomal protein l18 (21 kDa, Protein from human)
- Eukaryotic translation initiation factor 6 (26 kDa, Protein from human)
CryoEM structure of DH270.I3-CH848.10.17
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 8sb1
Q-score: 0.404
Henderson R, Zhou Y, Stalls V, Wiehe K, Saunders KO, Wagh K, Anasti K, Barr M, Parks R, Alam SM, Korber B, Haynes BF, Bartesaghi A, Acharya P
Nat Commun (2023) 14 pp. 2782-2782 [ DOI: doi:10.1038/s41467-023-38108-1 Pubmed: 37188681 ]
- Ch848.10.17 gp120 (52 kDa, Protein from HIV-1 06TG.HT008)
- Dh270.i3 variable heavy chain (14 kDa, Protein from Homo sapiens)
- Ch848.10.17.sosip gp41 (14 kDa, Protein from HIV-1 06TG.HT008)
- Dh270.i3-ch848.10.17 (Complex from Homo sapiens)
- Dh270.i3 variable light chain (11 kDa, Protein from Homo sapiens)