Cryo-EM structure of lipoprotein-bound LolCDE in nanodiscs
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9grc
Q-score: 0.005
Qiao W, Shen C, Chen Y, Chang S, Wang X, Yang L, Pang J, Luo Q, Zhang Z, Xiang Y, Zhao C, Lu G, Ding BS, Ying B, Tang X, Dong H
Signal Transduct Target Ther (2024) 9 pp. 354-354 [ Pubmed: 39725716 DOI: doi:10.1038/s41392-024-02067-w ]
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli K-12)
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli K-12)
- Complex of endogenous atp-bound lolcde in nanodiscs (Complex from Escherichia coli K-12)
- Lipoprotein-releasing system transmembrane protein lolc (43 kDa, Protein from Escherichia coli K-12)
- Lipoprotein(lpp) (1 kDa, Protein from Escherichia coli K-12)
LolCDE in complex with lipoprotein
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7arh
Q-score: 0.379
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ DOI: doi:10.1038/s41594-021-00573-x Pubmed: 33782615 ]
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
- Lolcde in complex with a lipoprotein (Complex from Escherichia coli)
- Lpp (1 kDa, Protein from Escherichia coli K-12)
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
LolCDE in complex with lipoprotein and AMPPNP complex undimerized form
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7arj
Q-score: 0.394
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ DOI: doi:10.1038/s41594-021-00573-x Pubmed: 33782615 ]
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Lolcde in complex with lipoprotein and amppnp complex undimerized form (Complex from Escherichia coli)
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
- Lpp (1 kDa, Protein from Escherichia coli K-12)
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
LolCDE in complex with lipoprotein and ADP
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7arl
Q-score: 0.408
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ DOI: doi:10.1038/s41594-021-00573-x Pubmed: 33782615 ]
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Palmitic acid (256 Da, Ligand)
- Lpp (Complex from Escherichia coli K-12)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lolcde in complex with lipoprotein and adp (Complex)
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
- Lpp (1 kDa, Protein from Escherichia coli K-12)
- Lipoprotein-releasing complex (Complex from Escherichia coli K-12)
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))
LolCDE in complex with lipoprotein and LolA
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7arm
Q-score: 0.339
Tang X, Chang S, Zhang K, Luo Q, Zhang Z, Wang T, Qiao W, Wang C, Shen C, Zhang Z, Zhu X, Wei X, Dong C, Zhang X, Dong H
Nat Struct Mol Biol (2021) 28 pp. 347-355 [ DOI: doi:10.1038/s41594-021-00573-x Pubmed: 33782615 ]
- (2s)-3-hydroxypropane-1,2-diyl dihexadecanoate (568 Da, Ligand)
- Lpp (Complex from Escherichia coli BL21(DE3))
- Palmitic acid (256 Da, Ligand)
- Lipoprotein-releasing system (Complex from Escherichia coli (strain K12))
- Outer-membrane lipoprotein carrier protein (20 kDa, Protein from Escherichia coli (strain K12))
- Lipoprotein-releasing system transmembrane protein lole (45 kDa, Protein from Escherichia coli (strain K12))
- Lpp (1 kDa, Protein from Escherichia coli BL21(DE3))
- Lipoprotein-releasing system atp-binding protein lold (26 kDa, Protein from Escherichia coli (strain K12))
- Lolcde in complex with lipoprotein and lola (Complex)
- Lipoprotein-releasing abc transporter permease subunit lolc (43 kDa, Protein from Escherichia coli (strain K12))