Cryo-EM map of the Chlamydomonas C* complex from Cdc5L-Flag dataset
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8xi2
Q-score: 0.381
EMBO J (2024) [ DOI: doi:10.1038/s44318-024-00274-3 Pubmed: 39415054 ]
- Cwf15/cwc15 cell cycle control protein (26 kDa, Protein from Chlamydomonas reinhardtii)
- U2 snrna (61 kDa, RNA from Chlamydomonas reinhardtii)
- Small nuclear ribonucleoprotein sm d1 (12 kDa, Protein from Chlamydomonas reinhardtii)
- Ski-interacting protein skip snw domain-containing protein (73 kDa, Protein from Chlamydomonas reinhardtii)
- U5-40k (39 kDa, Protein from Chlamydomonas reinhardtii)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Rbm22 (44 kDa, Protein from Chlamydomonas reinhardtii)
- Zinc ion (65 Da, Ligand)
- G10 protein (26 kDa, Protein from Chlamydomonas reinhardtii)
- Pre-mrna-splicing factor spf27 (32 kDa, Protein from Chlamydomonas reinhardtii)
- Cwf21 domain-containing protein (80 kDa, Protein from Chlamydomonas reinhardtii)
- Syf1 (104 kDa, Protein from Chlamydomonas reinhardtii)
- Elongation factor tu, chloroplastic (109 kDa, Protein from Chlamydomonas reinhardtii)
- Mi domain-containing protein (102 kDa, Protein from Chlamydomonas reinhardtii)
- Mpn domain-containing protein (278 kDa, Protein from Chlamydomonas reinhardtii)
- Prp17 (63 kDa, Protein from Chlamydomonas reinhardtii)
- Sm domain-containing protein (27 kDa, Protein from Chlamydomonas reinhardtii)
- Small nuclear ribonucleoprotein sm d3 (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ppiase cyclophilin-type domain-containing protein (61 kDa, Protein from Chlamydomonas reinhardtii)
- Rna (173-mer) (55 kDa, RNA from Chlamydomonas reinhardtii)
- U5 snrna (35 kDa, RNA from Chlamydomonas reinhardtii)
- Pre-mrna-processing factor 19 (54 kDa, Protein from Chlamydomonas reinhardtii)
- Crooked neck protein (96 kDa, Protein from Chlamydomonas reinhardtii)
- Intron-binding protein aquarius (201 kDa, Protein from Chlamydomonas reinhardtii)
- Sm protein f (9 kDa, Protein from Chlamydomonas reinhardtii)
- Small nuclear ribonucleoprotein sm d2 (12 kDa, Protein from Chlamydomonas reinhardtii)
- U6 snrna (32 kDa, RNA from Chlamydomonas reinhardtii)
- Small nuclear ribonucleoprotein e (10 kDa, Protein from Chlamydomonas reinhardtii)
- Small nuclear ribonucleoprotein g (8 kDa, Protein from Chlamydomonas reinhardtii)
- Plrg1 (56 kDa, Protein from Chlamydomonas reinhardtii)
- Rna (5'-r(p*cp*cp*gp*ap*ap*cp*g)-3') (2 kDa, RNA from Chlamydomonas reinhardtii)
- Cdc5l (91 kDa, Protein from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Peptidyl-prolyl cis-trans isomerase (17 kDa, Protein from Chlamydomonas reinhardtii)
- Chlamydomonas c* complex (Complex from Chlamydomonas reinhardtii)
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 7ase
Q-score: 0.314
Bochler A, Querido JB, Prilepskaja T, Soufari H, Simonetti A, Del Cistia ML, Kuhn L, Ribeiro AR, Valasek LS, Hashem Y
Cell Rep (2020) 33 pp. 108534-108534 [ Pubmed: 33357443 DOI: doi:10.1016/j.celrep.2020.108534 ]
- Putative eukaryotic translation initiation factor 1a (18 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s8 (25 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s18, putative (17 kDa, Protein from Trypanosoma cruzi)
- Elongation initiation factor 2 alpha subunit, putative (47 kDa, Protein from Trypanosoma cruzi)
- Ribosomal protein s20, putative (13 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s11, putative (20 kDa, Protein from Trypanosoma cruzi)
- Ribosomal protein s29, putative (6 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s33 (10 kDa, Protein from Trypanosoma cruzi)
- El41 (4 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s7 (24 kDa, Protein from Trypanosoma cruzi)
- Putative 40s ribosomal protein s9 (22 kDa, Protein from Trypanosoma cruzi)
- Putative 40s ribosomal protein s21 (27 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 3 subunit 7-like protein, putative (57 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s4 (30 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s15a, putative (16 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s6 (28 kDa, Protein from Trypanosoma cruzi)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein s19, putative (18 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s14, putative (15 kDa, Protein from Trypanosoma cruzi)
- Kddx60 (246 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s25 (12 kDa, Protein from Trypanosoma cruzi)
- Translation initiation factor, putative (38 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s3a-2 (29 kDa, Protein from Trypanosoma cruzi)
- Rna-binding protein, putative (27 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s16, putative (16 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s12 (15 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s3, putative (24 kDa, Protein from Trypanosoma cruzi)
- Eif3h (38 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s23, putative (15 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s13, putative (17 kDa, Protein from Trypanosoma cruzi)
- Guanine nucleotide-binding protein subunit beta-like protein (35 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 3 subunit e (46 kDa, Protein from Trypanosoma cruzi)
- Jab_mpn domain-containing protein (38 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 2 subunit, putative (52 kDa, Protein from Trypanosoma cruzi)
- Csn8_psd8_eif3k domain-containing protein (22 kDa, Protein from Trypanosoma cruzi)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- 40s ribosomal protein s26 (12 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s17, putative (16 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s30 (7 kDa, Protein from Trypanosoma cruzi)
- Initiator trna-met (24 kDa, RNA from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 5, putative (42 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s15, putative (17 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s27, putative (9 kDa, Protein from Trypanosoma cruzi)
- Protein translation factor sui1 homolog, putative (12 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s24 (15 kDa, Protein from Trypanosoma cruzi)
- Eif3a (87 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s2, putative (28 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein sa (27 kDa, Protein from Trypanosoma cruzi)
- Magnesium ion (24 Da, Ligand)
- Eukaryotic translation initiation factor 3 subunit 8, putative (82 kDa, Protein from Trypanosoma cruzi)
- 60s ribosomal protein l40 (16 kDa, Protein from Trypanosoma cruzi)
- Eukaryotic translation initiation factor 3 (eif-3) interacting protein, putative (56 kDa, Protein from Trypanosoma cruzi)
- 40s ribosomal protein s10, putative (18 kDa, Protein from Trypanosoma cruzi)
- 18s (746 kDa, RNA from Trypanosoma cruzi)
- 40s ribosomal protein s5, putative (21 kDa, Protein from Trypanosoma cruzi)
- 43s preinitiation complex from trypanosoma cruzi with the helicase kddx60 (Complex from Trypanosoma cruzi)