MERS-CoV Nsp1 bound to the human 43S pre-initiation complex
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 8ppl
Q-score: 0.427
Schubert K, Karousis ED, Ban I, Lapointe CP, Leibundgut M, Baumlin E, Kummerant E, Scaiola A, Schonhut T, Ziegelmuller J, Puglisi JD, Muhlemann O, Ban N
Mol Cell (2023) 83 pp. 3546-3557.e8 [ DOI: doi:10.1016/j.molcel.2023.09.002 Pubmed: 37802027 ]
- 40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein es19 (16 kDa, Protein from Homo sapiens)
- Met-trnai(met) (24 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s16 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s28 (7 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l41 (3 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 2 (38 kDa, Protein from Homo sapiens)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 40s ribosomal protein s20 (13 kDa, Protein from Homo sapiens)
- Host translation inhibitor nsp1 (24 kDa, Protein from Middle East respiratory syndrome-related coronavirus)
- 40s ribosomal protein s2 (31 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Eukaryotic translation initiation factor 3 subunit f (37 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s26 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
- Ubiquitin-40s ribosomal protein s27a (18 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit k (25 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s12 (14 kDa, Protein from Homo sapiens)
- Ubiquitin-like fubi-ribosomal protein es30 fusion protein (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (17 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit l (66 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit g (35 kDa, Protein from Homo sapiens)
- 40s ribosomal protein sa (32 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s5 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit d (64 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit h (39 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 1 (36 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- 40s ribosomal protein s24 (15 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s10 (18 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit a (166 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit e (52 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3a (30 kDa, Protein from Homo sapiens)
- Methionine (149 Da, Ligand)
- 40s ribosomal protein s25 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s11 (18 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit c (105 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 1 (12 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s9 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s21 (9 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (26 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 1a, x-chromosomal (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (24 kDa, Protein from Homo sapiens)
- Unknown atom or ion (Ligand)
- 40s ribosomal protein s6 (28 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 3 (51 kDa, Protein from Homo sapiens)
- Mers-cov nsp1 - 43s pre-initiation complex (Complex from Homo sapiens)
- 40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
- Small ribosomal subunit protein us13 (17 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit m (42 kDa, Protein from Homo sapiens)
- 18s rrna (603 kDa, RNA from Homo sapiens)
Resolution: 2.77 Å
EM Method: Single-particle
Fitted PDBs: 7zag
Q-score: 0.56
Kazan R, Bourgeois G, Lazennec-Schurdevin C, Larquet E, Mechulam Y, Coureux PD, Schmitt E
Nucleic Acids Res (2022) 50 pp. 6532-6548 [ DOI: doi:10.1093/nar/gkac490 Pubmed: 35694843 ]
- 30s ribosomal protein s14 type z (6 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s9 (15 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s15 (18 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s19 (15 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s3ae (22 kDa, Protein from Pyrococcus abyssi GE5)
- Mrna (8 kDa, RNA from Pyrococcus abyssi GE5)
- 30s ribosomal protein s17 (13 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s10 (11 kDa, Protein from Pyrococcus abyssi GE5)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s12 (16 kDa, Protein from Pyrococcus abyssi GE5)
- Translation initiation factor 5b (69 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s7 (24 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s13 (16 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s3 (23 kDa, Protein from Pyrococcus abyssi GE5)
- 50s ribosomal protein l41e (4 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s17e (8 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s24e (11 kDa, Protein from Pyrococcus abyssi GE5)
- Complex of 30s ribosomal subunit with initiation factor aif1a, the c-terminal domain of aif5b, mrna and trna (Complex)
- Water (18 Da, Ligand)
- 30s ribosomal protein s4e (28 kDa, Protein from Pyrococcus abyssi GE5)
- Methionine (149 Da, Ligand)
- 30s ribosomal protein s19e (17 kDa, Protein from Pyrococcus abyssi GE5)
- Rrna (487 kDa, RNA from Pyrococcus abyssi GE5)
- 30s ribosomal protein s8 (14 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s27e (7 kDa, Protein from Pyrococcus abyssi GE5)
- 50s ribosomal protein l7ae (13 kDa, Protein from Pyrococcus abyssi GE5)
- Met-trnaimet, translation initiation factor 1a and translation initiation factor 5b (Complex from Pyrococcus abyssi GE5)
- 30s ribosomal protein s11 (14 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s27ae (5 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s2 (23 kDa, Protein from Pyrococcus abyssi GE5)
- Zn-ribbon rna-binding protein involved in translation (7 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s6e (14 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s5 (26 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s8e (14 kDa, Protein from Pyrococcus abyssi GE5)
- Translation initiation factor 1a (15 kDa, Protein from Pyrococcus abyssi GE5)
- Met-trnaimet (24 kDa, RNA from Pyrococcus abyssi GE5)
- Mrna (Complex from Pyrococcus abyssi GE5)
- 30s ribosomal protein s28e (8 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s4 (21 kDa, Protein from Pyrococcus abyssi GE5)
- Magnesium ion (24 Da, Ligand)
- 30s and 50s ribosomal proteins (Complex from Pyrococcus abyssi GE5)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7zki
Q-score: 0.418
Kazan R, Bourgeois G, Lazennec-Schurdevin C, Larquet E, Mechulam Y, Coureux PD, Schmitt E
Nucleic Acids Res (2022) 50 pp. 6532-6548 [ DOI: doi:10.1093/nar/gkac490 Pubmed: 35694843 ]
- Translation initiation factor 1a and probable translation initiation factor if-2 (Complex from Pyrococcus abyssi GE5)
- Trna-aif5b-aif1a moiety of a pyrococcus abyssi translation initiation complex with 30s ribosomal subunit,trna, mrna and initiation factors 1a and 5b. (Complex)
- Methionine (149 Da, Ligand)
- Translation initiation factor 1a (15 kDa, Protein from Pyrococcus abyssi GE5)
- Translation initiation factor 5b (69 kDa, Protein from Pyrococcus abyssi GE5)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Trna-met (Complex from Escherichia coli)
- Met-trnaimet (24 kDa, RNA from Escherichia coli)
Resolution: 2.25 Å
EM Method: Single-particle
Fitted PDBs: 7zhg
Q-score: 0.696
Kazan R, Bourgeois G, Lazennec-Schurdevin C, Larquet E, Mechulam Y, Coureux PD, Schmitt E
Nucleic Acids Res (2022) 50 pp. 6532-6548 [ DOI: doi:10.1093/nar/gkac490 Pubmed: 35694843 ]
- 30s ribosomal protein s14 type z (6 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s9 (15 kDa, Protein from Pyrococcus abyssi GE5)
- High resolution 30s ribosomal subunit with a fragment of mrna and trna (Complex)
- 30s ribosomal protein s15 (18 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s19 (15 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s3ae (22 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s17 (13 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s10 (11 kDa, Protein from Pyrococcus abyssi GE5)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s12 (16 kDa, Protein from Pyrococcus abyssi GE5)
- High resolution 30s ribosomal subunit with a fragment of mrna (Complex from Pyrococcus abyssi GE5)
- 30s ribosomal protein s7 (24 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s13 (16 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s3 (23 kDa, Protein from Pyrococcus abyssi GE5)
- 50s ribosomal protein l41e (4 kDa, Protein from Pyrococcus abyssi GE5)
- Rrna 16s (487 kDa, RNA from Pyrococcus abyssi GE5)
- Mrna (5 kDa, RNA from Pyrococcus abyssi GE5)
- 30s ribosomal protein s17e (8 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s24e (11 kDa, Protein from Pyrococcus abyssi GE5)
- Water (18 Da, Ligand)
- 30s ribosomal protein s4e (28 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s19e (17 kDa, Protein from Pyrococcus abyssi GE5)
- Met-trnaimet (24 kDa, RNA from Pyrococcus abyssi GE5)
- 30s ribosomal protein s8 (14 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s27e (7 kDa, Protein from Pyrococcus abyssi GE5)
- 50s ribosomal protein l7ae (13 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s11 (14 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s27ae (5 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s2 (23 kDa, Protein from Pyrococcus abyssi GE5)
- Zn-ribbon rna-binding protein involved in translation (7 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s6e (14 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s5 (26 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s8e (14 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s28e (8 kDa, Protein from Pyrococcus abyssi GE5)
- 30s ribosomal protein s4 (21 kDa, Protein from Pyrococcus abyssi GE5)
- Magnesium ion (24 Da, Ligand)
- Met-trnaimet (Complex from Pyrococcus abyssi GE5)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7tql
Q-score: 0.412
Lapointe CP, Grosely R, Sokabe M, Alvarado C, Wang J, Montabana E, Villa N, Shin BS, Dever TE, Fraser CS, Fernandez IS, Puglisi JD
Nature (2022) 607 pp. 185-190 [ Pubmed: 35732735 DOI: doi:10.1038/s41586-022-04858-z ]
- 40s ribosomal protein s19 (15 kDa, Protein from Homo sapiens)
- Receptor of activated protein c kinase 1 (34 kDa, Protein from Homo sapiens)
- Ribosomal protein es17 (15 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 5b (69 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s26 (11 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s10 (11 kDa, Protein from Homo sapiens)
- Translation initiation factor eif1a (10 kDa, Protein from Homo sapiens)
- Human met-trnaimet (24 kDa, RNA from Homo sapiens)
- Ribosomal protein us10 (11 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- Ribosomal protein us15 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s21 (8 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (21 kDa, Protein from Homo sapiens)
- Ribosomal protein us13 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (23 kDa, Protein from Homo sapiens)
- Ribosomal protein us14 (6 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27a (7 kDa, Protein from Homo sapiens)
- Ribosomal protein es12 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s16 (15 kDa, Protein from Homo sapiens)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- Ribosomal protein us11 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s9 (21 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s6 (26 kDa, Protein from Homo sapiens)
- Human 40s ribosomal subunit in complex with eif1a and eif5b (Cell from Homo sapiens)
- Isoform 3 of 40s ribosomal protein s24 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
- 18s ribosomal rna (534 kDa, RNA from Homo sapiens)
- Ribosomal protein es25 (8 kDa, Protein from Homo sapiens)
- Ribosomal protein us2 (47 kDa, Protein from Homo sapiens)
- Ribosomal protein es30 (5 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s5 (21 kDa, Protein from Homo sapiens)
- Ribosomal protein es28 (6 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s11 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s2 (24 kDa, Protein from Homo sapiens)
- Ribosomal protein el41 (2 kDa, Protein from Homo sapiens)
- Guanosine-5'-monophosphate (363 Da, Ligand)
CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6woo
Q-score: 0.487
Wang J, Wang J, Shin BS, Kim JR, Dever TE, Puglisi JD, Fernandez IS
Nat Commun (2020) 11 pp. 5003-5003 [ DOI: doi:10.1038/s41467-020-18829-3 Pubmed: 33024099 ]
- El8 (25 kDa, Protein from Saccharomyces cerevisiae)
- Es21 (9 kDa, Protein from Saccharomyces cerevisiae)
- Us7 (22 kDa, Protein from Saccharomyces cerevisiae)
- Es10 (11 kDa, Protein from Saccharomyces cerevisiae)
- Eif5b (67 kDa, Protein from Saccharomyces cerevisiae)
- Us5 (23 kDa, Protein from Saccharomyces cerevisiae)
- Us3 (24 kDa, Protein from Saccharomyces cerevisiae)
- El13 (22 kDa, Protein from Saccharomyces cerevisiae)
- Es7 (21 kDa, Protein from Saccharomyces cerevisiae)
- Ul3 (43 kDa, Protein from Saccharomyces cerevisiae)
- Es6 (25 kDa, Protein from Saccharomyces cerevisiae)
- Methionine (149 Da, Ligand)
- Us17 (16 kDa, Protein from Saccharomyces cerevisiae)
- El36 (10 kDa, Protein from Saccharomyces cerevisiae)
- El38 (8 kDa, Protein from Saccharomyces cerevisiae)
- Us14 (6 kDa, Protein from Saccharomyces cerevisiae)
- Us15 (16 kDa, Protein from Saccharomyces cerevisiae)
- 18s ribosomal rna (578 kDa, RNA from Saccharomyces cerevisiae)
- El33 (11 kDa, Protein from Saccharomyces cerevisiae)
- El39 (6 kDa, Protein from Saccharomyces cerevisiae)
- Ul5 (19 kDa, Protein from Saccharomyces cerevisiae)
- El27 (15 kDa, Protein from Saccharomyces cerevisiae)
- El22 (11 kDa, Protein from Saccharomyces cerevisiae)
- Ul18 (33 kDa, Protein from Saccharomyces cerevisiae)
- Es1 (24 kDa, Protein from Saccharomyces cerevisiae)
- Ul22 (20 kDa, Protein from Saccharomyces cerevisiae)
- Es8 (22 kDa, Protein from Saccharomyces cerevisiae)
- Es28 (7 kDa, Protein from Saccharomyces cerevisiae)
- Es30 (6 kDa, Protein from Saccharomyces cerevisiae)
- Us10 (12 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Us13 (15 kDa, Protein from Saccharomyces cerevisiae)
- Us4 (20 kDa, Protein from Saccharomyces cerevisiae)
- Es27 (8 kDa, Protein from Saccharomyces cerevisiae)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- El19 (21 kDa, Protein from Saccharomyces cerevisiae)
- Ul14 (14 kDa, Protein from Saccharomyces cerevisiae)
- N-carboxy-l-threonine (163 Da, Ligand)
- 25s ribosomal rna (1 MDa, RNA from Saccharomyces cerevisiae)
- Us2 (22 kDa, Protein from Saccharomyces cerevisiae)
- 5.8s ribosomal rrna (50 kDa, RNA from Saccharomyces cerevisiae)
- El20 (20 kDa, Protein from Saccharomyces cerevisiae)
- Ul29 (13 kDa, Protein from Saccharomyces cerevisiae)
- El6 (19 kDa, Protein from Saccharomyces cerevisiae)
- El31 (12 kDa, Protein from Saccharomyces cerevisiae)
- Met-trna-imet (24 kDa, RNA from Saccharomyces cerevisiae)
- Es12 (13 kDa, Protein from Saccharomyces cerevisiae)
- El42 (11 kDa, Protein from Saccharomyces cerevisiae)
- Rack1 (34 kDa, Protein from Saccharomyces cerevisiae)
- El21 (18 kDa, Protein from Saccharomyces cerevisiae)
- Us12 (15 kDa, Protein from Saccharomyces cerevisiae)
- Es24 (15 kDa, Protein from Saccharomyces cerevisiae)
- El40 (5 kDa, Protein from Saccharomyces cerevisiae)
- Ul10 (21 kDa, Protein from Saccharomyces cerevisiae)
- El18 (20 kDa, Protein from Saccharomyces cerevisiae)
- 80s ribosome with eif5b, met-trnaimet, mrna, and gdp (Complex from Saccharomyces cerevisiae)
- Us11 (13 kDa, Protein from Saccharomyces cerevisiae)
- Us19 (11 kDa, Protein from Saccharomyces cerevisiae)
- El15 (24 kDa, Protein from Saccharomyces cerevisiae)
- Es4 (29 kDa, Protein from Saccharomyces cerevisiae)
- El41 (3 kDa, Protein from Saccharomyces cerevisiae)
- L10 (12 kDa, Protein from Saccharomyces cerevisiae)
- Es17 (14 kDa, Protein from Saccharomyces cerevisiae)
- Ul23 (13 kDa, Protein from Saccharomyces cerevisiae)
- 5s ribosomal rna (38 kDa, RNA from Saccharomyces cerevisiae)
- El24 (7 kDa, Protein from Saccharomyces cerevisiae)
- Ul2 (26 kDa, Protein from Saccharomyces cerevisiae)
- Ul13 (22 kDa, Protein from Saccharomyces cerevisiae)
- El37 (9 kDa, Protein from Saccharomyces cerevisiae)
- El14 (14 kDa, Protein from Saccharomyces cerevisiae)
- Ul16 (24 kDa, Protein from Saccharomyces cerevisiae)
- Ul30 (25 kDa, Protein from Saccharomyces cerevisiae)
- Es26 (11 kDa, Protein from Saccharomyces cerevisiae)
- Ul1 (24 kDa, Protein from Saccharomyces cerevisiae)
- El43 (9 kDa, Protein from Saccharomyces cerevisiae)
- Ul6 (21 kDa, Protein from Saccharomyces cerevisiae)
- Ul15 (16 kDa, Protein from Saccharomyces cerevisiae)
- Es19 (15 kDa, Protein from Saccharomyces cerevisiae)
- El32 (14 kDa, Protein from Saccharomyces cerevisiae)
- Mrna (1 kDa, RNA from Saccharomyces cerevisiae)
- Es25 (8 kDa, Protein from Saccharomyces cerevisiae)
- Ul4 (38 kDa, Protein from Saccharomyces cerevisiae)
- Us19 (15 kDa, Protein from Saccharomyces cerevisiae)
- Us8 (14 kDa, Protein from Saccharomyces cerevisiae)
- El30 (10 kDa, Protein from Saccharomyces cerevisiae)
- Es31 (6 kDa, Protein from Saccharomyces cerevisiae)
- El29 (6 kDa, Protein from Saccharomyces cerevisiae)
- El34 (13 kDa, Protein from Saccharomyces cerevisiae)
- Ul24 (14 kDa, Protein from Saccharomyces cerevisiae)
Cryo-electron microscopy structure of ribosome-bound initiation factor 2
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 3jcn
Q-score: 0.241
Sprink T, Ramrath DJF, Yamamoto H, Yamamoto K, Loerke J, Ismer J, Hildebrand PW, Scheerer P, Buerger J, Mielke T, Spahn CMT
Sci Adv (2016)
- Initiation factor 2 (97 kDa, Protein from Escherichia coli)
- 70s ribosome (2 MDa, Complex from Escherichia coli)
- Fmet-trnaimet (RNA from Escherichia coli)
- Initiation factor 2 was stalled on escherichia coli 70s ribosomes by the non-hydrolysable gtp analogue gdpnp in the presence of fmet-trnaimet and mrna. (2 MDa, Sample)
Cryo-electron microscopy structure of ribosome-bound initiation factor 2 70S IC II state
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 3jcj
Q-score: 0.35
Sprink T, Ramrath DJF, Yamamoto H, Yamamoto K, Loerke J, Ismer J, Hildebrand PW, Scheerer P, Buerger J, Mielke T, Spahn CMT
Sci Adv (2016) 2 pp. e1501502-e1501502
- Initiation factor 2 (97 kDa, Protein from Escherichia coli)
- 70s ribosome (2 MDa, Complex from Escherichia coli)
- Fmet-trnaimet (RNA from Escherichia coli)
- Escherichia coli initiation factor 2 stalled on escherichia coli 70s ribosomes by the non-hydrolysable gtp analogue gdpnp in the presence of fmet-trnaimet and mrna (2 MDa, Sample)