EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Edit your search query here and hit Return to execute it:

sample_name:"NADH:ubiquinone oxidoreductase subunit A9" AND author_orcid:"0000-0002-5371-6497"

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

EMD-32263

Download Map 3D View

Deactive state CI from Rotenone-NADH dataset, Subclass 1

Release date: Jan. 25, 2023
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7w2k
Q-score: 0.583

Gu J, Liu T, Guo R, Zhang L, Yang M

Nat Struct Mol Biol (2022) 29 pp. 172-182 [ DOI: doi:10.1038/s41594-022-00722-w Pubmed: 35145322 ]

Sample:

Complex i-b14.5a (12 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 (15 kDa, Protein from pig)
Nadh-ubiquinone oxidoreductase chain 4l (10 kDa, Protein from pig)
Complex i-sgdh (16 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (17 kDa, Protein from pig)
Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Complex i-b17 (15 kDa, Protein from pig)
Respiratory complex i (Complex from Sus scrofa)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (17 kDa, Protein from pig)
Complex i-aggg (8 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 (8 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial (18 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 subunit c2 (14 kDa, Protein from pig)
Complex i subunit b13 (12 kDa, Protein from pig)
Nadh-ubiquinone oxidoreductase 75 kda subunit, mitochondrial (75 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 (6 kDa, Protein from pig)
Adenosine-5'-diphosphate (427 Da, Ligand)
Complex i-30kd (24 kDa, Protein from pig)
Nadh-ubiquinone oxidoreductase chain 2 (39 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (12 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 (9 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 (14 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (20 kDa, Protein from pig)
(9r,11s)-9-({[(1s)-1-hydroxyhexadecyl]oxy}methyl)-2,2-dimethyl-5,7,10-trioxa-2lambda~5~-aza-6lambda~5~-phosphaoctacosane-6,6,11-triol (767 Da, Ligand)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (10 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (14 kDa, Protein from pig)
Coenzyme q10, (2z,6e,10z,14e,18e,22e,26z)-isomer (863 Da, Ligand)
Nadh-ubiquinone oxidoreductase chain 5 (68 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (36 kDa, Protein from pig)
Complex i-b16.6 (16 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (19 kDa, Protein from pig)
Magnesium ion (24 Da, Ligand)
Nadh dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (23 kDa, Protein from pig)
Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
Nadh-ubiquinone oxidoreductase chain 1 (35 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (21 kDa, Protein from pig)
Acyl carrier protein (10 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (9 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (47 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (20 kDa, Protein from pig)
Zinc ion (65 Da, Ligand)
S-[2-({n-[(2r)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate (540 Da, Ligand)
Complex i-9kd (5 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (13 kDa, Protein from pig)
Nadh-ubiquinone oxidoreductase chain 3 (12 kDa, Protein from pig)
Flavin mononucleotide (456 Da, Ligand)
Complex i-b12 (9 kDa, Protein from pig)
1,4-dihydronicotinamide adenine dinucleotide (665 Da, Ligand)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 5 (12 kDa, Protein from pig)
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
Nadh-ubiquinone oxidoreductase chain 6 (19 kDa, Protein from pig)
Nadh-ubiquinone oxidoreductase chain 4 (51 kDa, Protein from pig)
Nadh:ubiquinone oxidoreductase subunit a9 (38 kDa, Protein from pig)
Complex i-kfyi (4 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 (14 kDa, Protein from pig)
Iron/sulfur cluster (351 Da, Ligand)
Cardiolipin (1 kDa, Ligand)
Complex i-49kd (49 kDa, Protein from pig)

[Show more]

EMD-32218

Download Map 3D View

Matrix arm of deactive state CI from Q1-NADH dataset

Release date: Dec. 28, 2022
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7vz1
Q-score: 0.665

Gu J, Liu T, Guo R, Zhang L, Yang M

Nat Struct Mol Biol (2022) 29 pp. 172-182 [ DOI: doi:10.1038/s41594-022-00722-w Pubmed: 35145322 ]

Sample:

Nadh dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (17 kDa, Protein from pig)
Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Respiratory complex i (Complex from Sus scrofa)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 (17 kDa, Protein from pig)
Nadh-ubiquinone oxidoreductase 75 kda subunit, mitochondrial (75 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 (12 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial (44 kDa, Protein from pig)
Water (18 Da, Ligand)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial (24 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (20 kDa, Protein from pig)
(9r,11s)-9-({[(1s)-1-hydroxyhexadecyl]oxy}methyl)-2,2-dimethyl-5,7,10-trioxa-2lambda~5~-aza-6lambda~5~-phosphaoctacosane-6,6,11-triol (767 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (3 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (10 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (14 kDa, Protein from pig)
Magnesium ion (24 Da, Ligand)
Nadh dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial (23 kDa, Protein from pig)
Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate (745 Da, Ligand)
Nadh dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial (5 kDa, Protein from pig)
Acyl carrier protein (10 kDa, Protein from pig)
Nadh:ubiquinone oxidoreductase subunit a9 (38 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (47 kDa, Protein from pig)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 (9 kDa, Protein from pig)
Zinc ion (65 Da, Ligand)
S-[2-({n-[(2r)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate (540 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (13 kDa, Protein from pig)
Flavin mononucleotide (456 Da, Ligand)
1,4-dihydronicotinamide adenine dinucleotide (665 Da, Ligand)
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (744 Da, Ligand)
Nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 (12 kDa, Protein from pig)
Iron/sulfur cluster (351 Da, Ligand)
Cardiolipin (1 kDa, Ligand)

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: