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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"Nuclear pore complex protein Nup96"

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EMD-14321

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Human nuclear pore complex (dilated)

Release date: Sept. 21, 2022
Resolution: 50.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7r5j

Mosalaganti S, Obarska-Kosinska A, Siggel M, Taniguchi R, Turonova B, Zimmerli CE, Buczak K, Schmidt FH, Margiotta E, Mackmull MT, Hagen WJH, Hummer G, Kosinski J, Beck M

Science (2022) 376 pp. eabm9506-eabm9506 [ Pubmed: 35679397 DOI: doi:10.1126/science.abm9506 ]

Sample:

Nuclear pore complex protein nup96 (106 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup98 (91 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup85 (75 kDa, Protein from Homo sapiens)
Nucleoporin seh1 (39 kDa, Protein from Homo sapiens)
Nucleoporin nup35 (34 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup160 (162 kDa, Protein from Homo sapiens)
Protein elys (252 kDa, Protein from Homo sapiens)
Nuclear pore membrane glycoprotein 210 (205 kDa, Protein from Homo sapiens)
Nucleoporin nup188 homolog (196 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup107 (106 kDa, Protein from Homo sapiens)
Nucleoporin nup37 (36 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup155 (155 kDa, Protein from Homo sapiens)
Nucleoporin ndc1 (76 kDa, Protein from Homo sapiens)
Nucleoporin p54 (55 kDa, Protein from Homo sapiens)
Protein sec13 homolog (35 kDa, Protein from Homo sapiens)
Human nuclear pore complex from hek cells (Cellular component from Homo sapiens)
E3 sumo-protein ligase ranbp2 (358 kDa, Protein from Homo sapiens)
Nucleoporin nup43 (42 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup88 (83 kDa, Protein from Homo sapiens)
Nuclear pore glycoprotein p62 (53 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup133 (129 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup205 (228 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup93 (93 kDa, Protein from Homo sapiens)
Aladin (59 kDa, Protein from Homo sapiens)
Nucleoporin p58/p45 (60 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup214 (213 kDa, Protein from Homo sapiens)

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EMD-14322

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Human nuclear pore complex (constricted)

Release date: June 22, 2022
Resolution: 12.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7r5k
Q-score: 0.034

Mosalaganti S, Obarska-Kosinska A, Siggel M, Taniguchi R, Turonova B, Zimmerli CE, Buczak K, Schmidt FH, Margiotta E, Mackmull MT, Hagen WJH, Hummer G, Kosinski J, Beck M

Science (2022) 376 pp. eabm9506-eabm9506 [ Pubmed: 35679397 DOI: doi:10.1126/science.abm9506 ]

Sample:

Nuclear pore complex protein nup96 (106 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup98 (91 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup85 (75 kDa, Protein from Homo sapiens)
Nucleoporin seh1 (39 kDa, Protein from Homo sapiens)
Nucleoporin nup35 (34 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup160 (162 kDa, Protein from Homo sapiens)
Protein elys (252 kDa, Protein from Homo sapiens)
Nuclear pore membrane glycoprotein 210 (205 kDa, Protein from Homo sapiens)
Nucleoporin nup188 homolog (196 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup107 (106 kDa, Protein from Homo sapiens)
Nucleoporin nup37 (36 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup155 (155 kDa, Protein from Homo sapiens)
Nucleoporin ndc1 (76 kDa, Protein from Homo sapiens)
Nucleoporin p54 (55 kDa, Protein from Homo sapiens)
Protein sec13 homolog (35 kDa, Protein from Homo sapiens)
E3 sumo-protein ligase ranbp2 (358 kDa, Protein from Homo sapiens)
Nucleoporin nup43 (42 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup88 (83 kDa, Protein from Homo sapiens)
Nuclear pore complex (120 MDa, Cellular component from Homo sapiens)
Nuclear pore glycoprotein p62 (53 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup133 (129 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup205 (228 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup93 (93 kDa, Protein from Homo sapiens)
Aladin (59 kDa, Protein from Homo sapiens)
Nucleoporin p58/p45 (60 kDa, Protein from Homo sapiens)
Nuclear pore complex protein nup214 (213 kDa, Protein from Homo sapiens)

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EMD-32394

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Cryo-EM structure of the NR subunit from X. laevis NPC

Release date: March 2, 2022
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 7wb4
Q-score: 0.214

Huang G, Zhan X, Zeng C, Zhu X, Liang K, Zhao Y, Wang P, Wang Q, Zhou Q, Tao Q, Liu M, Lei J, Yan C, Shi Y

Cell Res (2022) 32 pp. 349-358 [ DOI: doi:10.1038/s41422-021-00610-w Pubmed: 35177819 ]

Sample:

Protein elys (268 kDa, Protein from Xenopus laevis)
Mgc83295 protein (227 kDa, Protein from Xenopus laevis)
Nucleoporin seh1-b (39 kDa, Protein from Xenopus laevis)
Nup155-prov protein (154 kDa, Protein from Xenopus laevis)
Mgc154553 protein (41 kDa, Protein from Xenopus laevis)
Mgc83926 protein (36 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup93 (93 kDa, Protein from Xenopus laevis)
Outer nup133 (127 kDa, Protein from Xenopus laevis)
The nr subunit (Complex from Xenopus laevis)
Outer nup160 (162 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup85 (75 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein (105 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup96 (105 kDa, Protein from Xenopus laevis)
Gator complex protein sec13 (35 kDa, Protein from Xenopus laevis)

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EMD-31891

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Structure of Xenopus laevis NPC nuclear ring asymmetric unit

Release date: Feb. 2, 2022
Resolution: 8.1 Å
EM Method: Single-particle
Fitted PDBs: 7vci
Q-score: 0.13

Tai L, Zhu Y, Ren H, Huang X, Zhang C, Sun F

Protein Cell (2022) 13 pp. 760-777 [ Pubmed: 35015240 DOI: doi:10.1007/s13238-021-00895-y ]

Sample:

Protein elys (268 kDa, Protein from Xenopus laevis)
Nuclear pore complex (Complex from Xenopus laevis)
Mgc83295 protein (227 kDa, Protein from Xenopus laevis)
Nucleoporin seh1-a (39 kDa, Protein from Xenopus laevis)
Mgc154553 protein (41 kDa, Protein from Xenopus laevis)
Mgc83926 protein (36 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup96 (104 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup93 (93 kDa, Protein from Xenopus laevis)
Outer nup133 (127 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup85 (75 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein (105 kDa, Protein from Xenopus laevis)
Nup160 (163 kDa, Protein from Xenopus laevis)
Gator complex protein sec13 (35 kDa, Protein from Xenopus laevis)

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EMD-32056

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Cryo-EM structure of Xenopus laevis nuclear pore complex cytoplasmic ring subunit

Release date: Feb. 2, 2022
Resolution: 8.7 Å
EM Method: Single-particle
Fitted PDBs: 7vop
Q-score: 0.086

Tai L, Zhu Y, Ren H, Huang X, Zhang C, Sun F

Protein Cell (2022) 13 pp. 760-777 [ Pubmed: 35015240 DOI: doi:10.1007/s13238-021-00895-y ]

Sample:

Nucleoporin seh1-a (39 kDa, Protein from Xenopus laevis)
Mgc154553 protein (41 kDa, Protein from Xenopus laevis)
Nup358 (325 kDa, Protein from Xenopus laevis)
Nuclear pore complex cytoplasmic ring (Complex from Xenopus laevis)
Nup88a protein (82 kDa, Protein from Xenopus laevis)
Mgc83926 protein (36 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup96 (104 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup93 (93 kDa, Protein from Xenopus laevis)
Outer nup133 (127 kDa, Protein from Xenopus laevis)
Nucleoporin can (209 kDa, Protein from Xenopus laevis)
Il4i1 protein (55 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup85 (75 kDa, Protein from Xenopus laevis)
Nucleoporin 160kda (160 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein (105 kDa, Protein from Xenopus laevis)
Mgc83295 protein (227 kDa, Protein from Xenopus laevis)
Gator complex protein sec13 (35 kDa, Protein from Xenopus laevis)

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EMD-0909

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core region reconstruction.

Release date: July 21, 2021
Resolution: 5.5 Å
EM Method: Single-particle
Fitted PDBs: 6lk8
Q-score: 0.089

Huang G, Zhang Y, Zhu X, Zeng C, Wang Q, Zhou Q, Tao Q, Liu M, Lei J, Yan C, Shi Y

Cell Res (2020) 30 pp. 520-531 [ Pubmed: 32376910 DOI: doi:10.1038/s41422-020-0319-4 ]

Sample:

Nup214 complex coiled coil region 2, helix 3 (2 kDa, Protein from Xenopus laevis)
Mgc154553 protein (41 kDa, Protein from Xenopus laevis)
Outer nup160 (162 kDa, Protein from Xenopus laevis)
Mgc83295 protein (227 kDa, Protein from Xenopus laevis)
Cytoplasmic ring subunit of xenopus laevis npc (Complex from Xenopus laevis)
Nup214 complex coiled coil region 2, helix 2 (2 kDa, Protein from Xenopus laevis)
Nup214 complex coiled coil region 1, helix 2 (6 kDa, Protein from Xenopus laevis)
Nup214 complex coiled-coil region 1, helix 1 (5 kDa, Protein from Xenopus laevis)
Mgc83926 protein (36 kDa, Protein from Xenopus laevis)
Nucleoporin seh1-a (36 kDa, Protein from Xenopus laevis)
Nup214 complex coiled coil region 1, helix 3 (6 kDa, Protein from Xenopus laevis)
Nup358 complex, clamps (322 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup85 (75 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein (105 kDa, Protein from Xenopus laevis)
Nuclear pore complex protein nup96 (105 kDa, Protein from Xenopus laevis)
Gator complex protein sec13 (35 kDa, Protein from Xenopus laevis)
Bridge domain (33 kDa, Protein from Xenopus laevis)
Nup214 complex coiled coil region 2, helix 1 (2 kDa, Protein from Xenopus laevis)
Outer nup133 (127 kDa, Protein from Xenopus laevis)

[Show more]

Sort by: Download

Showing 1 - 6 of 6. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [6]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: