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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

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perform basic research in molecular biology

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offer vital services to scientists in the member states

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scientists, students and visitors at all levels

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More about EMBL

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represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

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Structural biology

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Structural biology

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Hinxton

EMBL-EBI: European Bioinformatics Institute

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Epigenetics and neurobiology

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sample_name:"Nucleoporin NUP85"

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EMD-41285

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Double nuclear outer ring of Nup84-complexes from the yeast NPC

Release date: Oct. 11, 2023
Resolution: 8.1 Å
EM Method: Single-particle
Fitted PDBs: 8tie
Q-score: 0.08

Akey CW, Echeverria I, Ouch C, Nudelman I, Shi Y, Wang J, Chait BT, Sali A, Fernandez-Martinez J, Rout MP

Mol Cell (2023) 83 pp. 3283-3302.e5 [ DOI: doi:10.1016/j.molcel.2023.08.025 Pubmed: 37738963 ]

Sample:

Nucleoporin nup120 (120 kDa, Protein from Saccharomyces cerevisiae)
Nuclear pore complex (Complex from Saccharomyces cerevisiae)
Nucleoporin nup84 (83 kDa, Protein from Saccharomyces cerevisiae)
Nup133 isoform 1 (133 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin seh1 (34 kDa, Protein from Saccharomyces cerevisiae)
Double nup84 y-complex (Complex from Saccharomyces cerevisiae)
Nup145 isoform 1 (145 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup85 (84 kDa, Protein from Saccharomyces cerevisiae)
Protein transport protein sec13 (33 kDa, Protein from Saccharomyces cerevisiae)

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EMD-24231

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Double nuclear outer ring from the isolated yeast NPC

Release date: Jan. 26, 2022
Resolution: 11.6 Å
EM Method: Single-particle
Fitted PDBs: 7n84
Q-score: 0.063

Akey CW, Singh D, Ouch C, Echeverria I, Nudelman I, Varberg JM, Yu Z, Fang F, Shi Y, Wang J, Salzberg D, Song K, Xu C, Gumbart JC, Suslov S, Unruh J, Jaspersen SL, Chait BT, Sali A, Fernandez-Martinez J, Ludtke SJ, Villa E, Rout MP

Cell (2022) 185 pp. 361-378.e25 [ Pubmed: 34982960 DOI: doi:10.1016/j.cell.2021.12.015 ]

Sample:

Nucleoporin seh1 (39 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin 145c (81 kDa, Protein from Saccharomyces cerevisiae)
Yeast double outer ring (10 MDa, Complex from Saccharomyces cerevisiae)
Nucleoporin nup120 (120 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup84 (83 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup188 (188 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup133 (133 kDa, Protein from Saccharomyces cerevisiae)
Unknown (5 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup85 (84 kDa, Protein from Saccharomyces cerevisiae)
Protein transport protein sec13 (33 kDa, Protein from Saccharomyces cerevisiae)

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EMD-24258

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Structure of the in situ yeast NPC

Release date: Jan. 26, 2022
Resolution: 37.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7n9f
Q-score: 0.043

Akey CW, Singh D, Ouch C, Echeverria I, Nudelman I, Varberg JM, Yu Z, Fang F, Shi Y, Wang J, Salzberg D, Song K, Xu C, Gumbart JC, Suslov S, Unruh J, Jaspersen SL, Chait BT, Sali A, Fernandez-Martinez J, Ludtke SJ, Villa E, Rout MP

Cell (2022) 185 pp. 361-378.e25 [ Pubmed: 34982960 DOI: doi:10.1016/j.cell.2021.12.015 ]

Sample:

Nucleoporin asm4 (58 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin seh1 (39 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup49/nsp49 (49 kDa, Protein from Saccharomyces cerevisiae)
Orphans bound to nup192 ntd (3 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup188 (188 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup57 (57 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nsp1 (86 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup120 (120 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup84 (83 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup133 (133 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup85 (84 kDa, Protein from Saccharomyces cerevisiae)
Protein transport protein sec13 (33 kDa, Protein from Saccharomyces cerevisiae)
Dynein light chain 1, cytoplasmic (10 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup192 (191 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup82 (82 kDa, Protein from Saccharomyces cerevisiae)
Yeast npc (52 MDa, Cellular component from Saccharomyces cerevisiae)
Nucleoporin nup170 (169 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup157 (156 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nic96 (96 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup53 (52 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin nup159 (159 kDa, Protein from Saccharomyces cerevisiae)
Nucleoporin 145c (81 kDa, Protein from Saccharomyces cerevisiae)

[Show more]

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

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Select database:

EMDB [3]

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