PSI-AcpPCI supercomplex from Amphidinium carterae
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8jw0
Q-score: 0.51
Li X, Li Z, Wang F, Zhao S, Xu C, Mao Z, Duan J, Feng Y, Yang Y, Shen L, Wang G, Yang Y, Yu LJ, Sang M, Han G, Wang X, Kuang T, Shen JR, Wang W
PNAS (2024) 121 pp. e2315476121-e2315476121 [ DOI: doi:10.1073/pnas.2315476121 Pubmed: 38319970 ]
- Psi-acppci supercomplex from amphidinium carterae (Complex from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-17, acppci-17 (17 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-12, acppci-12 (17 kDa, Protein from Amphidinium carterae)
- Phylloquinone (450 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-13, acppci-13 (17 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-4, acppci-4 (18 kDa, Protein from Amphidinium carterae)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-11, acppci-11 (19 kDa, Protein from Amphidinium carterae)
- Beta-carotene (536 Da, Ligand)
- Chlorophyll c1 (610 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-7, acppci-7 (21 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-1, acppci-1 (15 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-14, acppci-14 (17 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-2, acppci-2 (19 kDa, Protein from Amphidinium carterae)
- Photosystem i psaj (7 kDa, Protein from Amphidinium carterae)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-5, acppci-5 (20 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-3, acppci-3 (18 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-10, acppci-10 (19 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-9, acppci-9 (17 kDa, Protein from Amphidinium carterae)
- Photosystem i psai (14 kDa, Protein from Amphidinium carterae)
- Peridinin (630 Da, Ligand)
- [(1~{s},5~{r})-3,3,5-trimethyl-5-oxidanyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-[(1~{s},4~{s},6~{r})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]cyclohexyl] ethanoate (642 Da, Ligand)
- (3s,3'r,5r,6s,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol (582 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Photosystem i psab (67 kDa, Protein from Amphidinium carterae)
- Photosystem i psac (9 kDa, Protein from Amphidinium carterae)
- Photosystem i psae (8 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-15, acppci-15 (17 kDa, Protein from Amphidinium carterae)
- Photosystem i psal (27 kDa, Protein from Amphidinium carterae)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Photosystem i psaa (70 kDa, Protein from Amphidinium carterae)
- Photosystem i psad (28 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-16, acppci-16 (17 kDa, Protein from Amphidinium carterae)
- Photosystem i psar (14 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-8, acppci-8 (23 kDa, Protein from Amphidinium carterae)
- Iron/sulfur cluster (351 Da, Ligand)
- Photosystem i psam (9 kDa, Protein from Amphidinium carterae)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-6, acppci-6 (19 kDa, Protein from Amphidinium carterae)
- Photosystem i psaf (20 kDa, Protein from Amphidinium carterae)
PSI-AcpPCI supercomplex from Symbiodinium
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 8jze
Q-score: 0.518
Li X, Li Z, Wang F, Zhao S, Xu C, Mao Z, Duan J, Feng Y, Yang Y, Shen L, Wang G, Yang Y, Yu LJ, Sang M, Han G, Wang X, Kuang T, Shen JR, Wang W
PNAS (2024) 121 pp. e2315476121-e2315476121 [ DOI: doi:10.1073/pnas.2315476121 Pubmed: 38319970 ]
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-3, acppci-3 (22 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-6, acppci-6 (19 kDa, Protein from Symbiodinium)
- Phylloquinone (450 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-5, acppci-5 (20 kDa, Protein from Symbiodinium)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-11, acppci-11 (21 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-15, acppci-15 (17 kDa, Protein from Symbiodinium)
- Beta-carotene (536 Da, Ligand)
- Photosystem i psad (24 kDa, Protein from Symbiodinium)
- Chlorophyll c1 (610 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-2, acppci-2 (19 kDa, Protein from Symbiodinium)
- Photosystem i psac (9 kDa, Protein from Symbiodinium)
- Photosystem i psae (8 kDa, Protein from Symbiodinium)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem i psab (74 kDa, Protein from Symbiodinium)
- Photosystem i psaj (11 kDa, Protein from Symbiodinium)
- Peridinin (630 Da, Ligand)
- [(1~{s},5~{r})-3,3,5-trimethyl-5-oxidanyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-[(1~{s},4~{s},6~{r})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]cyclohexyl] ethanoate (642 Da, Ligand)
- Photosystem i psai (13 kDa, Protein from Symbiodinium)
- (3s,3'r,5r,6s,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol (582 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-12, acppci-12 (17 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-4, acppci-4 (19 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-8, acppci-8 (24 kDa, Protein from Symbiodinium)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Photosystem i unk (6 kDa, Protein from Symbiodinium)
- Photosystem i psar (15 kDa, Protein from Symbiodinium)
- Photosystem i psaa (75 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-7, acppci-7 (21 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-14, acppci-14 (17 kDa, Protein from Symbiodinium)
- Photosystem i psal (27 kDa, Protein from Symbiodinium)
- Psi-acppci supercomplex from symbiodinium (Complex from Symbiodinium)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Photosystem i psaf (20 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-10, acppci-10 (20 kDa, Protein from Symbiodinium)
- Photosystem i unk (11 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-9, acppci-9 (17 kDa, Protein from Symbiodinium)
- Iron/sulfur cluster (351 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-13, acppci-13 (17 kDa, Protein from Symbiodinium)
- Photosystem i psam (8 kDa, Protein from Symbiodinium)
PSI-AcpPCI supercomplex from Symbiodinium
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8jzf
Q-score: 0.537
Li X, Li Z, Wang F, Zhao S, Xu C, Mao Z, Duan J, Feng Y, Yang Y, Shen L, Wang G, Yang Y, Yu LJ, Sang M, Han G, Wang X, Kuang T, Shen JR, Wang W
PNAS (2024) 121 pp. e2315476121-e2315476121 [ DOI: doi:10.1073/pnas.2315476121 Pubmed: 38319970 ]
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-3, acppci-3 (22 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-6, acppci-6 (19 kDa, Protein from Symbiodinium)
- Phylloquinone (450 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-5, acppci-5 (20 kDa, Protein from Symbiodinium)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-11, acppci-11 (21 kDa, Protein from Symbiodinium)
- Beta-carotene (536 Da, Ligand)
- Photosystem i psad (24 kDa, Protein from Symbiodinium)
- Chlorophyll c1 (610 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-2, acppci-2 (19 kDa, Protein from Symbiodinium)
- Photosystem i psac (9 kDa, Protein from Symbiodinium)
- Photosystem i psae (8 kDa, Protein from Symbiodinium)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem i psab (74 kDa, Protein from Symbiodinium)
- Photosystem i psaj (11 kDa, Protein from Symbiodinium)
- Peridinin (630 Da, Ligand)
- [(1~{s},5~{r})-3,3,5-trimethyl-5-oxidanyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-[(1~{s},4~{s},6~{r})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]cyclohexyl] ethanoate (642 Da, Ligand)
- Photosystem i psai (13 kDa, Protein from Symbiodinium)
- (3s,3'r,5r,6s,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol (582 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-12, acppci-12 (17 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-4, acppci-4 (19 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-8, acppci-8 (24 kDa, Protein from Symbiodinium)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Photosystem i unk (6 kDa, Protein from Symbiodinium)
- Photosystem i psar (15 kDa, Protein from Symbiodinium)
- Photosystem i psaa (75 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-7, acppci-7 (21 kDa, Protein from Symbiodinium)
- Photosystem i psal (27 kDa, Protein from Symbiodinium)
- Psi-acppci supercomplex from symbiodinium (Complex from Symbiodinium)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Photosystem i psaf (20 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-10, acppci-10 (20 kDa, Protein from Symbiodinium)
- Photosystem i unk (11 kDa, Protein from Symbiodinium)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-9, acppci-9 (17 kDa, Protein from Symbiodinium)
- Iron/sulfur cluster (351 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Chlorophyll a-chlorophyll c-peridinin-protein-complex i-13, acppci-13 (17 kDa, Protein from Symbiodinium)
- Photosystem i psam (8 kDa, Protein from Symbiodinium)
PSI-LHCI-LHCII-Lhcb9 supercomplex of Physcomitrella patens
Resolution: 2.68 Å
EM Method: Single-particle
Fitted PDBs: 7xqp
Q-score: 0.536
Zhang S, Tang K, Yan Q, Li X, Shen L, Wang W, He YK, Kuang T, Han G, Shen JR, Zhang X
Nat Plants (2023) 9 pp. 832-846 [ Pubmed: 37095225 DOI: doi:10.1038/s41477-023-01401-4 ]
- Phylloquinone (450 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Psak (8 kDa, Protein from Physcomitrium patens)
- Chlorophyll a-b binding protein, chloroplastic (20 kDa, Protein from Physcomitrium patens)
- Chlorophyll a-b binding protein, chloroplastic (24 kDa, Protein from Physcomitrium patens)
- Beta-carotene (536 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Physcomitrium patens)
- Psao (9 kDa, Protein from Physcomitrium patens)
- (1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol (600 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Physcomitrium patens)
- Chlorophyll a-b binding protein, chloroplastic (24 kDa, Protein from Physcomitrium patens)
- Predicted protein psad (15 kDa, Protein from Physcomitrium patens)
- Chlorophyll b (907 Da, Ligand)
- Psi-f (17 kDa, Protein from Physcomitrium patens)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Physcomitrium patens)
- Photosystem i p700 chlorophyll a apoprotein a1 (82 kDa, Protein from Physcomitrium patens)
- Psi-g (10 kDa, Protein from Physcomitrium patens)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Physcomitrium patens)
- Chlorophyll a-b binding protein, chloroplastic (22 kDa, Protein from Physcomitrium patens)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Physcomitrium patens)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Physcomitrium patens)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Psi-lhci-lhcii-lhcb9 supercomplex of physcomitrella patens (Complex from Physcomitrium patens)
- Psi subunit v (17 kDa, Protein from Physcomitrium patens)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Photosystem i iron-sulfur center (8 kDa, Protein from Physcomitrium patens)
- Dodecyl-alpha-d-maltoside (510 Da, Ligand)
- Psah photosystem i reaction center subunit (10 kDa, Protein from Physcomitrium patens)
- Iron/sulfur cluster (351 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Psae (6 kDa, Protein from Physcomitrium patens)
Barley photosystem I-LHCI-Lhca6 supercomplex
Resolution: 3.88 Å
EM Method: Single-particle
Fitted PDBs: 7ewk
Q-score: 0.396
Shen L, Tang K, Wang W, Wang C, Wu H, Mao Z, An S, Chang S, Kuang T, Shen JR, Han G, Zhang X
Nature (2022) 601 pp. 649-654 [ DOI: doi:10.1038/s41586-021-04277-6 Pubmed: 34879391 ]
- Phylloquinone (450 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Psi-lhci-lhca6 supercomplex of barley (Complex from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein lhca3 (24 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i iron-sulfur center (8 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Beta-carotene (536 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a1 (82 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit d (15 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit h (6 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll b (907 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- Chlorophyll a isomer (893 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (21 kDa, Protein from Hordeum vulgare)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit k (8 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit f (17 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit e (7 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit l (15 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein lhca1 (21 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein lhca6 (23 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Iron/sulfur cluster (351 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
Barley photosystem I-LHCI-Lhca5 supercomplex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ew6
Q-score: 0.466
Shen L, Tang K, Wang W, Wang C, Wu H, Mao Z, An S, Chang S, Kuang T, Shen JR, Han G, Zhang X
Nature (2022) 601 pp. 649-654 [ DOI: doi:10.1038/s41586-021-04277-6 Pubmed: 34879391 ]
- Photosystem i reaction center subunit iii, chloroplastic (24 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Phylloquinone (450 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem i reaction center subunit vi, chloroplastic (14 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i iron-sulfur center (8 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Beta-carotene (536 Da, Ligand)
- Photosystem i reaction center subunit viii (4 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll b (907 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- Chlorophyll a isomer (893 Da, Ligand)
- Photosystem i reaction center subunit ii, chloroplastic (21 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit psak, chloroplastic (13 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein lhca1 (26 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Photosystem i reaction center subunit iv, chloroplastic (15 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein lhca5 (27 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein, chloroplastic (29 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit xi, chloroplastic (22 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Iron/sulfur cluster (351 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Psi-lhci-lhca5 supercomplex of barley (Complex from Hordeum vulgare subsp. spontaneum)
PSI-NDH supercomplex of Barley
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 7f9o
Q-score: 0.153
Shen L, Tang K, Wang W, Wang C, Wu H, Mao Z, An S, Chang S, Kuang T, Shen JR, Han G, Zhang X
Nature (2022) 601 pp. 649-654 [ DOI: doi:10.1038/s41586-021-04277-6 Pubmed: 34879391 ]
- Photosystem i reaction center subunit iii, chloroplastic (24 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit 1, chloroplastic (38 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit 3, chloroplastic (13 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Phylloquinone (450 Da, Ligand)
- Nad(p)h-quinone oxidoreductase subunit n, chloroplastic (25 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nadh-plastoquinone oxidoreductase subunit 5 (87 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Unidentified stromal protein (5 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex b4 (9 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit h, chloroplastic (44 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit vi, chloroplastic (14 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex b1 (51 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex l1 (17 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit 2, chloroplastic (53 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i iron-sulfur center (8 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Beta-carotene (536 Da, Ligand)
- Nad(p)h-quinone oxidoreductase subunit 6, chloroplastic (19 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex l4 (13 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit viii (4 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit i, chloroplastic (19 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll b (907 Da, Ligand)
- Photosynthetic ndh subunit of subcomplex l2 (23 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex l5 (25 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Nad(p)h-quinone oxidoreductase chain 4, chloroplastic (56 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit m, chloroplastic (24 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex b5 (18 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex b3 (13 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Psi-ndh supercomplex of barley (Complex from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit j, chloroplastic (18 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- Chlorophyll a isomer (893 Da, Ligand)
- Photosystem i reaction center subunit ii, chloroplastic (21 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Photosystem i reaction center subunit psak, chloroplastic (13 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit k, chloroplastic (27 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein lhca1 (26 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex l2 (24 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit 4l, chloroplastic (11 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Nad(p)h-quinone oxidoreductase subunit l, chloroplastic (22 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Photosystem i reaction center subunit iv, chloroplastic (15 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein lhca4 (21 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein lhca5 (27 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein, chloroplastic (29 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i reaction center subunit xi, chloroplastic (22 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Photosynthetic ndh subunit of subcomplex b2 (38 kDa, Protein from Hordeum vulgare subsp. spontaneum)
- Iron/sulfur cluster (351 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
Photosystem I-LHCI-LHCII of Chlamydomonas reinhardtii
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 7d0j
Q-score: 0.407
Huang Z, Shen L, Wang W, Mao Z, Yi X, Kuang T, Shen JR, Zhang X, Han G
Nat Commun (2021) 12 pp. 1100-1100 [ DOI: doi:10.1038/s41467-021-21362-6 Pubmed: 33597543 ]
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (20 kDa, Protein from Chlamydomonas reinhardtii)
- Phylloquinone (450 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit psak, chloroplastic (8 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit f, photosystem i reaction center subunit iii, chloroplastic (17 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i iron-sulfur center (8 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit v, chloroplastic (9 kDa, Protein from Chlamydomonas reinhardtii)
- Beta-carotene (536 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (19 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i subunit o (10 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (25 kDa, Protein from Chlamydomonas reinhardtii)
- (1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r,6r)-4-hydroxy-2,2,6-trimethyl-7-oxabicyclo[4.1.0]hept-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenylidene}-1,5,5-trimethylcyclohexane-1,3-diol (600 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (24 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll b (907 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a1 (81 kDa, Protein from Chlamydomonas reinhardtii)
- Lhcii (Complex)
- Photosystem i reaction center subunit vi, chloroplastic (11 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit ii, chloroplastic (16 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (22 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit iv, chloroplastic (7 kDa, Protein from Chlamydomonas reinhardtii)
- (3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Chlamydomonas reinhardtii)
- Psi subunit v (16 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (25 kDa, Protein from Chlamydomonas reinhardtii)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (22 kDa, Protein from Chlamydomonas reinhardtii)
- Iron/sulfur cluster (351 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Photosystem i-lhci-lhcii supercomplex of chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
- Lhci (Complex from Chlamydomonas reinhardtii)
- Photosystem i (Complex from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (21 kDa, Protein from Chlamydomonas reinhardtii)