Cryo-EM structure of the full-length Pseudomonas aeruginosa bacteriophytochrome in its Pr state
Bodizs S, Meszaros P, Grunewald L, Takala H, Westenhoff S
Structure (2024) 32 pp. 1952-1962.e3 [ Pubmed: 39216473 DOI: doi:10.1016/j.str.2024.08.008 ]
- Bacteriophytochrome (82 kDa, Protein from Pseudomonas aeruginosa)
- Homodimeric complex of the protein bacteriophytochrome containing its cofactor biliverdin (160 kDa, Complex from Pseudomonas aeruginosa)
- 3-[2-[(z)-[3-(2-carboxyethyl)-5-[(z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(z)-[(3e)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1h-pyrrol-3- yl]propanoic acid (585 Da, Ligand)
Cryo-EM structure of the full-length Pseudomonas aeruginosa bacteriophytochrome in its Pfr state
Bodizs S, Meszaros P, Grunewald L, Takala H, Westenhoff S
Structure (2024) 32 pp. 1952-1962.e3 [ Pubmed: 39216473 DOI: doi:10.1016/j.str.2024.08.008 ]
- Bacteriophytochrome (82 kDa, Protein from Pseudomonas aeruginosa)
- Homodimeric complex of the protein bacteriophytochrome containing its cofactor biliverdin (160 kDa, Complex from Pseudomonas aeruginosa)
- 3-[2-[(z)-[3-(2-carboxyethyl)-5-[(z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(z)-[(3e)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1h-pyrrol-3- yl]propanoic acid (585 Da, Ligand)
Cryo-EM structure of DrBphP photosensory module in Pr state
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8avv
Q-score: 0.496
Wahlgren WY, Claesson E, Tuure I, Trillo-Muyo S, Bodizs S, Ihalainen JA, Takala H, Westenhoff S
Nat Commun (2022) 13 pp. 7673-7673 [ DOI: doi:10.1038/s41467-022-34893-3 Pubmed: 36509762 ]
- Full-length bacteriophytochrome fused to its response regulator from deinococcus radiodurans. (101 kDa, Complex from Deinococcus radiodurans R1)
- Bacteriophytochrome,response regulator (101 kDa, Protein from Deinococcus radiodurans R1)
- 3-[2-[(z)-[3-(2-carboxyethyl)-5-[(z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(z)-[(3e)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1h-pyrrol-3- yl]propanoic acid (585 Da, Ligand)
Cryo-EM structure of DrBphP in Pr state
Resolution: 3.62 Å
EM Method: Single-particle
Fitted PDBs: 8avw
Q-score: 0.406
Wahlgren WY, Claesson E, Tuure I, Trillo-Muyo S, Bodizs S, Ihalainen JA, Takala H, Westenhoff S
Nat Commun (2022) 13 pp. 7673-7673 [ DOI: doi:10.1038/s41467-022-34893-3 Pubmed: 36509762 ]
- Full-length bacteriophytochrome fused to its response regulator from deinococcus radiodurans. (101 kDa, Complex from Deinococcus radiodurans R1)
- Bacteriophytochrome,response regulator (101 kDa, Protein from Deinococcus radiodurans R1)
- 3-[2-[(z)-[3-(2-carboxyethyl)-5-[(z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(z)-[(3e)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1h-pyrrol-3- yl]propanoic acid (585 Da, Ligand)