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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"PSI-K" AND author_name:"K"

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EMD-62511

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PSI-LHCI supercomplex binding with 10 Lhcas from C. subellipsoidea

Release date: Feb. 26, 2025
Resolution: 1.92 Å
EM Method: Single-particle
Fitted PDBs: 9kqp
Q-score: 0.723

Tsai PC, Kato K, Shen JR, Akita F

Biochim Biophys Acta Bioenerg (2025) 1866 pp. 149543-149543 [ Pubmed: 39947506 DOI: doi:10.1016/j.bbabio.2025.149543 ]

Sample:

Photosystem i iron-sulfur center (8 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i reaction centre subunit vi (14 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i reaction center subunit ii, chloroplastic (20 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (24 kDa, Protein from Coccomyxa subellipsoidea C-169)
Dodecyl-beta-d-maltoside (510 Da, Ligand)
Chlorophyll a-b binding protein, chloroplastic (26 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i reaction centre subunit iv/psae (8 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i reaction center subunit xii (3 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (29 kDa, Protein from Coccomyxa subellipsoidea C-169)
(3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
Phylloquinone (450 Da, Ligand)
Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i psao (15 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (24 kDa, Protein from Coccomyxa subellipsoidea C-169)
1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
(3~{e},5~{e},7~{e})-6-methyl-8-[(6~{r})-2,2,6-trimethylcyclohexyl]octa-3,5,7-trien-2-one (260 Da, Ligand)
(3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
Photosystem i reaction center subunit ix (4 kDa, Protein from Coccomyxa subellipsoidea C-169)
Beta-carotene (536 Da, Ligand)
Chlorophyll a-b binding protein, chloroplastic (26 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i reaction center subunit viii (3 kDa, Protein from Coccomyxa subellipsoidea C-169)
Psi subunit v (21 kDa, Protein from Coccomyxa subellipsoidea C-169)
[2-((1-oxododecanoxy-(2-hydroxy-3-propanyl))-phosphonate-oxy)-ethyl]-trimethylammonium (440 Da, Ligand)
Astaxanthin (596 Da, Ligand)
Phosphatidylethanolamine (734 Da, Ligand)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Chlorophyll a-b binding protein, chloroplastic/lhca2 (29 kDa, Protein from Coccomyxa subellipsoidea C-169)
1,2-diacyl-glycerol-3-sn-phosphate (704 Da, Ligand)
Chlorophyll b (907 Da, Ligand)
Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
Photosystem i reaction center subunit iii (25 kDa, Protein from Coccomyxa subellipsoidea C-169)
Diacyl glycerol (625 Da, Ligand)
Photosystem i reaction center subunit v, chloroplastic (14 kDa, Protein from Coccomyxa subellipsoidea C-169)
Green alga photosystem i lhci supercomplex binding with 10 lhcas (Complex from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (29 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a (893 Da, Ligand)
Unknown ligand (254 Da, Ligand)
Chlorophyll a isomer (893 Da, Ligand)
Psi-k (13 kDa, Protein from Coccomyxa subellipsoidea C-169)
Water (18 Da, Ligand)
Photosystem i p700 chlorophyll a apoprotein a2 (81 kDa, Protein from Coccomyxa subellipsoidea C-169)
Iron/sulfur cluster (351 Da, Ligand)

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EMD-62512

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PSI-LHCI supercomplex binding with 8 Lhcas from C. subellipsoidea

Release date: Feb. 26, 2025
Resolution: 2.06 Å
EM Method: Single-particle
Fitted PDBs: 9kqq
Q-score: 0.668

Tsai PC, Kato K, Shen JR, Akita F

Biochim Biophys Acta Bioenerg (2025) 1866 pp. 149543-149543 [ Pubmed: 39947506 DOI: doi:10.1016/j.bbabio.2025.149543 ]

Sample:

Photosystem i iron-sulfur center (8 kDa, Protein from Coccomyxa subellipsoidea C-169)
1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
Photosystem i reaction center subunit ii, chloroplastic (20 kDa, Protein from Coccomyxa subellipsoidea C-169)
Dodecyl-beta-d-maltoside (510 Da, Ligand)
(3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
Chlorophyll a-b binding protein, chloroplastic (26 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i reaction centre subunit iv/psae (8 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i reaction center subunit xii (3 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (29 kDa, Protein from Coccomyxa subellipsoidea C-169)
Phylloquinone (450 Da, Ligand)
Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (24 kDa, Protein from Coccomyxa subellipsoidea C-169)
1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
(3s,5r,6s,3's,5'r,6's)-5,6,5',6'-diepoxy-5,6,5',6'- tetrahydro-beta,beta-carotene-3,3'-diol (600 Da, Ligand)
Photosystem i reaction center subunit ix (4 kDa, Protein from Coccomyxa subellipsoidea C-169)
Green alga photosystem i lhci supercomplex binding with 8 lhcas (Complex from Coccomyxa subellipsoidea C-169)
Beta-carotene (536 Da, Ligand)
Chlorophyll a-b binding protein, chloroplastic (26 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Coccomyxa subellipsoidea C-169)
Photosystem i reaction center subunit viii (3 kDa, Protein from Coccomyxa subellipsoidea C-169)
Psi subunit v (21 kDa, Protein from Coccomyxa subellipsoidea C-169)
Astaxanthin (596 Da, Ligand)
Phosphatidylethanolamine (734 Da, Ligand)
1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
Chlorophyll b (907 Da, Ligand)
Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
Photosystem i reaction center subunit iii (25 kDa, Protein from Coccomyxa subellipsoidea C-169)
Diacyl glycerol (625 Da, Ligand)
Photosystem i reaction center subunit v, chloroplastic (14 kDa, Protein from Coccomyxa subellipsoidea C-169)
Chlorophyll a-b binding protein, chloroplastic (29 kDa, Protein from Coccomyxa subellipsoidea C-169)
Unknown ligand (254 Da, Ligand)
Chlorophyll a isomer (893 Da, Ligand)
Psi-k (13 kDa, Protein from Coccomyxa subellipsoidea C-169)
Water (18 Da, Ligand)
Photosystem i p700 chlorophyll a apoprotein a2 (81 kDa, Protein from Coccomyxa subellipsoidea C-169)
Iron/sulfur cluster (351 Da, Ligand)

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: