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sample_name:"P_tRNA" AND current_status:"REL" AND xref_links:"interpro" AND author_name:"J"
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Collided ribosome in a disome unit from S. cerevisiae

Release date: Feb. 22, 2023
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7zux
Q-score: 0.516

Best K, Ikeuchi K, Kater L, Best D, Musial J, Matsuo Y, Berninghausen O, Becker T, Inada T, Beckmann R

Nat Commun (2023) 14 pp. 921-921 [ DOI: doi:10.1038/s41467-023-36230-8 Pubmed: 36801861 ]

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Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Release date: Jan. 25, 2023
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8b7y
Q-score: 0.556

Koller TO, Scheid U, Kosel T, Herrmann J, Krug D, Boshoff HIM, Beckert B, Evans JC, Schlemmer J, Sloan B, Weiner DM, Via LE, Moosa A, Ioerger TR, Graf M, Zinshteyn B, Abdelshahid M, Nguyen F, Arenz S, Gille F, Siebke M, Seedorf T, Plettenburg O, Green R, Warnke AL, Ullrich J, Warrass R, Barry 3rd CE, Warner DF, Mizrahi V, Kirschning A, Wilson DN, Muller R

J Am Chem Soc (2023) 145 pp. 851-863 [ DOI: doi:10.1021/jacs.2c08816 Pubmed: 36603206 ]

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Human mitochondrial ribosome at 2.2 A resolution

Release date: July 13, 2022
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 7qi4
Q-score: 0.658

Singh V, Itoh Y, Del'Olio S, Hassan A, Naschberger A, Flygaard RK, Nobe Y, Izumikawa K, Aibara S, Andrell J, Whitford PC, Barrientos A, Taoka M, Amunts A

Nat Commun (2024) 15 pp. 4272-4272 [ Pubmed: 38769321 DOI: doi:10.1038/s41467-024-48163-x ]

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Drosophila melanogaster Testis polysome ribosome

Release date: July 28, 2021
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 6xu7
Q-score: 0.308

Hopes T, Norris K, Agapiou M, McCarthy CGP, Lewis PA, O'Connell MJ, Fontana J, Aspden JL

Nucleic Acids Res (2022) 50 pp. 2240-2257 [ Pubmed: 34283226 DOI: doi:10.1093/nar/gkab606 ]

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VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus

Release date: May 5, 2021
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7nhl
Q-score: 0.476

Crowe-McAuliffe C, Murina V, Turnbull KJ, Kasari M, Mohamad M, Polte C, Takada H, Vaitkevicius K, Johansson J, Ignatova Z, Atkinson GC, O'Neill AJ, Hauryliuk V, Wilson DN

Nat Commun (2021) 12 pp. 3577-3577 [ DOI: doi:10.1038/s41467-021-23753-1 Pubmed: 34117249 ]

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VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Release date: May 5, 2021
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7nhn
Q-score: 0.534

Crowe-McAuliffe C, Murina V, Turnbull KJ, Kasari M, Mohamad M, Polte C, Takada H, Vaitkevicius K, Johansson J, Ignatova Z, Atkinson GC, O'Neill AJ, Hauryliuk V, Wilson DN

Nat Commun (2021) 12 pp. 3577-3577 [ DOI: doi:10.1038/s41467-021-23753-1 Pubmed: 34117249 ]

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Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Release date: June 24, 2020
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6wnw
Q-score: 0.43

Huang S, Aleksashin NA, Loveland AB, Klepacki D, Reier K, Kefi A, Szal T, Remme J, Jaeger L, Vazquez-Laslop N, Korostelev AA, Mankin AS

Nat Commun (2020) 11 pp. 2900-2900 [ DOI: doi:10.1038/s41467-020-16694-8 Pubmed: 32518240 ]

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Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Release date: July 10, 2019
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6r5q
Q-score: 0.486

Shanmuganathan V, Schiller N, Magoulopoulou A, Cheng J, Braunger K, Cymer F, Berninghausen O, Beatrix B, Kohno K, Heijne GV, Beckmann R

eLife (2019) 8 [ DOI: doi:10.7554/eLife.46267 Pubmed: 31246176 ]

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Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Release date: July 10, 2019
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6r6g
Q-score: 0.358

Shanmuganathan V, Schiller N, Magoulopoulou A, Cheng J, Braunger K, Cymer F, Berninghausen O, Beatrix B, Kohno K, Heijne GV, Beckmann R

eLife (2019) 8 [ DOI: doi:10.7554/eLife.46267 Pubmed: 31246176 ]

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Structure of XBP1u-paused ribosome nascent chain complex (rotated state)

Release date: July 10, 2019
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6r6p
Q-score: 0.429

Shanmuganathan V, Schiller N, Magoulopoulou A, Cheng J, Braunger K, Cymer F, Berninghausen O, Beatrix B, Kohno K, Heijne GV, Beckmann R

eLife (2019) 8 [ DOI: doi:10.7554/eLife.46267 Pubmed: 31246176 ]

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