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sample_name:"P_tRNA" AND current_status:"REL" AND xref_links:"pdb" AND author_name:"S"
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Damaged 70S ribosome with PrfH bound

Release date: Feb. 5, 2025
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 9mor
Q-score: 0.367

Tian Y, Li Q, Fatma S, Jiang J, Jin H, Zeng F, Huang RH

bioRxiv (2025) [ Pubmed: 39829893 DOI: doi:10.1101/2025.01.09.632186 ]

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Damaged 70S ribosome with PrfH bound

Release date: Feb. 5, 2025
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 9mq4
Q-score: 0.462

Tian Y, Li Q, Fatma S, Jiang J, Jin H, Zeng F, Huang RH

bioRxiv (2025) [ Pubmed: 39829893 DOI: doi:10.1101/2025.01.09.632186 ]

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Translating S. pombe ribosome

Release date: Oct. 16, 2024
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 9axv
Q-score: 0.473

Gemin O, Gluc M, Rosa H, Purdy M, Niemann M, Peskova Y, Mattei S, Jomaa A

Nat Commun (2024) 15 pp. 8666-8666 [ DOI: doi:10.1038/s41467-024-52911-4 Pubmed: 39379376 ]

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YlmH bound to PtRNA-50S

Release date: June 12, 2024
Resolution: 1.96 Å
EM Method: Single-particle
Fitted PDBs: 8s1p
Q-score: 0.688

Takada H, Paternoga H, Fujiwara K, Nakamoto JA, Park EN, Dimitrova-Paternoga L, Beckert B, Saarma M, Tenson T, Buskirk AR, Atkinson GC, Chiba S, Wilson DN, Hauryliuk V

Nucleic Acids Res (2024) 52 pp. 8483-8499 [ Pubmed: 38811035 DOI: doi:10.1093/nar/gkae399 ]

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YlmH bound to stalled 50S subunits with RqcH and PtRNA

Release date: June 12, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8s1u
Q-score: 0.448

Takada H, Paternoga H, Fujiwara K, Nakamoto JA, Park EN, Dimitrova-Paternoga L, Beckert B, Saarma M, Tenson T, Buskirk AR, Atkinson GC, Chiba S, Wilson DN, Hauryliuk V

Nucleic Acids Res (2024) 52 pp. 8483-8499 [ Pubmed: 38811035 DOI: doi:10.1093/nar/gkae399 ]

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Terminating ribosome with SRI-41315

Release date: Dec. 27, 2023
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8scb
Q-score: 0.589

Coelho JPL, Yip MCJ, Oltion K, Taunton J, Shao S

Nat Chem Biol (2024) 20 pp. 877-884 [ DOI: doi:10.1038/s41589-023-01521-0 Pubmed: 38172604 ]

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Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution

Release date: July 5, 2023
Resolution: 2.63 Å
EM Method: Single-particle
Fitted PDBs: 7qi5
Q-score: 0.594

Singh V, Itoh Y, Del'Olio S, Hassan A, Naschberger A, Flygaard RK, Nobe Y, Izumikawa K, Aibara S, Andrell J, Whitford PC, Barrientos A, Taoka M, Amunts A

Nat Commun (2024) 15 pp. 4272-4272 [ Pubmed: 38769321 DOI: doi:10.1038/s41467-024-48163-x ]

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Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

Release date: May 17, 2023
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 7qi6
Q-score: 0.539

Singh V, Itoh Y, Del'Olio S, Hassan A, Naschberger A, Flygaard RK, Nobe Y, Izumikawa K, Aibara S, Andrell J, Whitford PC, Barrientos A, Taoka M, Amunts A

Nat Commun (2024) 15 pp. 4272-4272 [ Pubmed: 38769321 DOI: doi:10.1038/s41467-024-48163-x ]

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Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Release date: Jan. 25, 2023
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8b7y
Q-score: 0.556

Koller TO, Scheid U, Kosel T, Herrmann J, Krug D, Boshoff HIM, Beckert B, Evans JC, Schlemmer J, Sloan B, Weiner DM, Via LE, Moosa A, Ioerger TR, Graf M, Zinshteyn B, Abdelshahid M, Nguyen F, Arenz S, Gille F, Siebke M, Seedorf T, Plettenburg O, Green R, Warnke AL, Ullrich J, Warrass R, Barry 3rd CE, Warner DF, Mizrahi V, Kirschning A, Wilson DN, Muller R

J Am Chem Soc (2023) 145 pp. 851-863 [ DOI: doi:10.1021/jacs.2c08816 Pubmed: 36603206 ]

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Structure of Escherischia coli heat shock protein Hsp15 in complexwith ribosomal 50S subunits bearing peptidyl-tRNA.

Release date: Nov. 16, 2022
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8ap4
Q-score: 0.493

Safdari HA, Kasvandik S, Polte C, Ignatova Z, Tenson T, Wilson DN

Nucleic Acids Res (2022) 50 pp. 12515-12526 [ DOI: doi:10.1093/nar/gkac1035 Pubmed: 36370110 ]

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