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sample_name:"P_tRNA" AND xref_links:"drugbank" AND current_status:"REL" AND author_name:"B"
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YlmH bound to PtRNA-50S

Release date: June 12, 2024
Resolution: 1.96 Å
EM Method: Single-particle
Fitted PDBs: 8s1p
Q-score: 0.688

Takada H, Paternoga H, Fujiwara K, Nakamoto JA, Park EN, Dimitrova-Paternoga L, Beckert B, Saarma M, Tenson T, Buskirk AR, Atkinson GC, Chiba S, Wilson DN, Hauryliuk V

Nucleic Acids Res (2024) 52 pp. 8483-8499 [ Pubmed: 38811035 DOI: doi:10.1093/nar/gkae399 ]

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YlmH bound to stalled 50S subunits with RqcH and PtRNA

Release date: June 12, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8s1u
Q-score: 0.448

Takada H, Paternoga H, Fujiwara K, Nakamoto JA, Park EN, Dimitrova-Paternoga L, Beckert B, Saarma M, Tenson T, Buskirk AR, Atkinson GC, Chiba S, Wilson DN, Hauryliuk V

Nucleic Acids Res (2024) 52 pp. 8483-8499 [ Pubmed: 38811035 DOI: doi:10.1093/nar/gkae399 ]

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Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.

Release date: Jan. 25, 2023
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8b7y
Q-score: 0.556

Koller TO, Scheid U, Kosel T, Herrmann J, Krug D, Boshoff HIM, Beckert B, Evans JC, Schlemmer J, Sloan B, Weiner DM, Via LE, Moosa A, Ioerger TR, Graf M, Zinshteyn B, Abdelshahid M, Nguyen F, Arenz S, Gille F, Siebke M, Seedorf T, Plettenburg O, Green R, Warnke AL, Ullrich J, Warrass R, Barry 3rd CE, Warner DF, Mizrahi V, Kirschning A, Wilson DN, Muller R

J Am Chem Soc (2023) 145 pp. 851-863 [ DOI: doi:10.1021/jacs.2c08816 Pubmed: 36603206 ]

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Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Release date: Aug. 11, 2021
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7nsp
Q-score: 0.448

Beckert B, Leroy EC, Sothiselvam S, Bock LV, Svetlov MS, Graf M, Arenz S, Abdelshahid M, Seip B, Grubmuller H, Mankin AS, Innis CA, Vazquez-Laslop N, Wilson DN

Nat Commun (2021) 12 pp. 4466-4466 [ Pubmed: 34294725 DOI: doi:10.1038/s41467-021-24674-9 ]

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Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Release date: July 14, 2021
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7nso
Q-score: 0.551

Beckert B, Leroy EC, Sothiselvam S, Bock LV, Svetlov MS, Graf M, Arenz S, Abdelshahid M, Seip B, Grubmuller H, Mankin AS, Innis CA, Vazquez-Laslop N, Wilson DN

Nat Commun (2021) 12 pp. 4466-4466 [ Pubmed: 34294725 DOI: doi:10.1038/s41467-021-24674-9 ]

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Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Release date: July 14, 2021
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7nsq
Q-score: 0.52

Beckert B, Leroy EC, Sothiselvam S, Bock LV, Svetlov MS, Graf M, Arenz S, Abdelshahid M, Seip B, Grubmuller H, Mankin AS, Innis CA, Vazquez-Laslop N, Wilson DN

Nat Commun (2021) 12 pp. 4466-4466 [ Pubmed: 34294725 DOI: doi:10.1038/s41467-021-24674-9 ]

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Structure of XBP1u-paused ribosome nascent chain complex (post-state)

Release date: July 10, 2019
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6r5q
Q-score: 0.486

Shanmuganathan V, Schiller N, Magoulopoulou A, Cheng J, Braunger K, Cymer F, Berninghausen O, Beatrix B, Kohno K, Heijne GV, Beckmann R

eLife (2019) 8 [ DOI: doi:10.7554/eLife.46267 Pubmed: 31246176 ]

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Structure of XBP1u-paused ribosome nascent chain complex with SRP.

Release date: July 10, 2019
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6r6g
Q-score: 0.358

Shanmuganathan V, Schiller N, Magoulopoulou A, Cheng J, Braunger K, Cymer F, Berninghausen O, Beatrix B, Kohno K, Heijne GV, Beckmann R

eLife (2019) 8 [ DOI: doi:10.7554/eLife.46267 Pubmed: 31246176 ]

Sample: [Show more]

Structure of XBP1u-paused ribosome nascent chain complex (rotated state)

Release date: July 10, 2019
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6r6p
Q-score: 0.429

Shanmuganathan V, Schiller N, Magoulopoulou A, Cheng J, Braunger K, Cymer F, Berninghausen O, Beatrix B, Kohno K, Heijne GV, Beckmann R

eLife (2019) 8 [ DOI: doi:10.7554/eLife.46267 Pubmed: 31246176 ]

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Structure of XBP1u-paused ribosome nascent chain complex with Sec61.

Release date: July 10, 2019
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6r7q
Q-score: 0.34

Shanmuganathan V, Schiller N, Magoulopoulou A, Cheng J, Braunger K, Cymer F, Berninghausen O, Beatrix B, Kohno K, Heijne GV, Beckmann R

eLife (2019) 8 [ DOI: doi:10.7554/eLife.46267 Pubmed: 31246176 ]

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