Cholinephosphotransferase in complex with diacylglycerol in nanodisc
Roberts JR, Horibata Y, Kwarcinski FE, Lam V, Raczkowski AM, Hubbard A, White B, Sugimoto H, Tall GG, Ohi MD, Maeda S
Nat Commun (2025) 16 pp. 111-111 [ Pubmed: 39747155 DOI: doi:10.1038/s41467-024-55673-1 ]
- Saccharomyces cerevisiae cdp-choline phosphotransferase in complex with diacyl-glycerol (Complex from Saccharomyces cerevisiae)
- Ycpt1 (Complex from Saccharomyces cerevisiae)
- Nanobody24 (Complex from Lama glama)
- Cholinephosphotransferase 1 (Protein from Saccharomyces cerevisiae S288C)
Cholinephosphotransferase in complex with diacylglycerol
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8ul9
Q-score: 0.503
Roberts JR, Horibata Y, Kwarcinski FE, Lam V, Raczkowski AM, Hubbard A, White B, Sugimoto H, Tall GG, Ohi MD, Maeda S
Nat Commun (2025) 16 pp. 111-111 [ Pubmed: 39747155 DOI: doi:10.1038/s41467-024-55673-1 ]
- Magnesium ion (24 Da, Ligand)
- Cholinephosphotransferase 1 (44 kDa, Protein from Saccharomyces cerevisiae)
- Diacyl glycerol (625 Da, Ligand)
- Water (18 Da, Ligand)
- Ycpt1 (Complex from Saccharomyces cerevisiae)
- Nanobody24 (Complex from Lama glama)
- Saccharomyces cerevisiae cdp-choline phosphotransferase in complex with diacyl-glycerol (Complex from Saccharomyces cerevisiae)
- 1,2-dioleoyl-sn-glycero-3-phosphocholine (787 Da, Ligand)
S. enterica WbaP in a styrene maleic acid liponanoparticle
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 8t53
Q-score: 0.143
Dodge GJ, Anderson AJ, He Y, Liu W, Viner R, Imperiali B
eLife (2024) 12 [ DOI: doi:10.7554/eLife.91125 Pubmed: 38358918 ]
Structure of Xenopus cholinephosphotransferase1 in complex with CDP
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8ero
Q-score: 0.49
Nat Commun (2023) 14 pp. 2753-2753 [ Pubmed: 37179328 DOI: doi:10.1038/s41467-023-38003-9 ]
- 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (760 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Cholinephosphotransferase 1 (44 kDa, Protein from Xenopus laevis)
- Cytidine-5'-diphosphate (403 Da, Ligand)
- Homodimer of choline phosphotransferase 1 (Complex from Xenopus laevis)
Structure of Xenopus cholinephosphotransferase1 in complex with CDP-choline
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8erp
Q-score: 0.466
Nat Commun (2023) 14 pp. 2753-2753 [ Pubmed: 37179328 DOI: doi:10.1038/s41467-023-38003-9 ]
- Magnesium ion (24 Da, Ligand)
- Cholinephosphotransferase 1 (44 kDa, Protein from Xenopus laevis)
- Homodimer of choline phosphotransferase 1 (Complex from Xenopus laevis)
- [2-cytidylate-o'-phosphonyloxyl]-ethyl-trimethyl-ammonium (488 Da, Ligand)
- 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (760 Da, Ligand)
Cryo-EM map of human GlcNAc-1-phosphotransferase A2B2 subcomplex
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7s05
Q-score: 0.503
Li H, Lee WS, Feng X, Bai L, Jennings BC, Liu L, Doray B, Canfield WM, Kornfeld S, Li H
Nat Struct Mol Biol (2022) 29 pp. 348-356 [ Pubmed: 35332324 DOI: doi:10.1038/s41594-022-00748-0 ]
- Glcnac-1-phosphotransferase (Complex from Homo sapiens)
- N-acetylglucosamine-1-phosphotransferase subunits alpha/beta (134 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
Cryo-EM structure of human GlcNAc-1-phosphotransferase A2B2 subcomplex
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7s06
Q-score: 0.425
Li H, Lee WS, Feng X, Bai L, Jennings BC, Liu L, Doray B, Canfield WM, Kornfeld S, Li H
Nat Struct Mol Biol (2022) 29 pp. 348-356 [ Pubmed: 35332324 DOI: doi:10.1038/s41594-022-00748-0 ]
Cryo-EM structure of Plasmodium vivax hexokinase (Open state)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6vyf
Q-score: 0.531
Srivastava SS, Darling JE, Suryadi J, Morris JC, Drew ME, Subramaniam S
IUCrJ (2020) 7 pp. 453-461 [ DOI: doi:10.1107/S2052252520002456 ]
- Phosphotransferase (56 kDa, Protein from Plasmodium vivax)
- Plasmodium vivax hexokinase (Complex from Plasmodium vivax)
Cryo-EM structure of Plasmodium vivax hexokinase (Closed state)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6vyg
Q-score: 0.502
Srivastava SS, Darling JE, Suryadi J, Morris JC, Drew ME, Subramaniam S
IUCrJ (2020) 7 pp. 453-461 [ DOI: doi:10.1107/S2052252520002456 ]
- Phosphotransferase (56 kDa, Protein from Plasmodium vivax)
- Plasmodium vivax hexokinase (Complex from Plasmodium vivax)