Cryo-EM structure of the yeast SPT-Orm1-Monomer complex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8c80
Q-score: 0.463
Schafer JH, Korner C, Esch BM, Limar S, Parey K, Walter S, Januliene D, Moeller A, Frohlich F
Nat Commun (2023) 14 pp. 6196-6196 [ DOI: doi:10.1038/s41467-023-41747-z Pubmed: 37794019 ]
- Serine palmitoyltransferase 1 (64 kDa, Protein from Saccharomyces cerevisiae)
- Serine palmitoyltransferase-regulating protein tsc3 (9 kDa, Protein from Saccharomyces cerevisiae)
- Pyridoxal-5'-phosphate (247 Da, Ligand)
- Protein orm1 (25 kDa, Protein from Saccharomyces cerevisiae)
- Heterotetrameric complex of orm1 with lcb1, lcb2 and tsc3 (160 kDa, Complex from Saccharomyces cerevisiae)
- Serine palmitoyltransferase 2 (63 kDa, Protein from Saccharomyces cerevisiae)
- N-[(2s,3s,4r)-1,3,4-trihydroxyoctadecan-2-yl]hexacosanamide (696 Da, Ligand)
- Ergosterol (396 Da, Ligand)
- 2-{[(4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25r)-spirost-5-en-3-yl]oxy}butyl 4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranoside (1 kDa, Ligand)
Cryo-EM structure of the yeast SPT-Orm1-Sac1 complex
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8c81
Q-score: 0.525
Schafer JH, Korner C, Esch BM, Limar S, Parey K, Walter S, Januliene D, Moeller A, Frohlich F
Nat Commun (2023) 14 pp. 6196-6196 [ DOI: doi:10.1038/s41467-023-41747-z Pubmed: 37794019 ]
- Serine palmitoyltransferase 1 (64 kDa, Protein from Saccharomyces cerevisiae)
- Serine palmitoyltransferase-regulating protein tsc3 (9 kDa, Protein from Saccharomyces cerevisiae)
- Pyridoxal-5'-phosphate (247 Da, Ligand)
- Heteropentameric complex of orm1 with lcb1, lcb2, tsc3 and sac1 (230 kDa, Complex from Saccharomyces cerevisiae)
- Protein orm1 (25 kDa, Protein from Saccharomyces cerevisiae)
- Serine palmitoyltransferase 2 (63 kDa, Protein from Saccharomyces cerevisiae)
- N-[(2s,3s,4r)-1,3,4-trihydroxyoctadecan-2-yl]hexacosanamide (696 Da, Ligand)
- Ergosterol (396 Da, Ligand)
- 2-{[(4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25r)-spirost-5-en-3-yl]oxy}butyl 4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranoside (1 kDa, Ligand)
- Phosphatidylinositol-3-phosphatase sac1 (71 kDa, Protein from Saccharomyces cerevisiae)
Cryo-EM structure of the yeast SPT-Orm1-Dimer complex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8c82
Q-score: 0.488
Schafer JH, Korner C, Esch BM, Limar S, Parey K, Walter S, Januliene D, Moeller A, Frohlich F
Nat Commun (2023) 14 pp. 6196-6196 [ DOI: doi:10.1038/s41467-023-41747-z Pubmed: 37794019 ]
- Serine palmitoyltransferase 1 (62 kDa, Protein from Saccharomyces cerevisiae)
- Complex of orm1 with lcb1, lcb2 and tsc3 (325 kDa, Complex from Saccharomyces cerevisiae)
- Serine palmitoyltransferase-regulating protein tsc3 (9 kDa, Protein from Saccharomyces cerevisiae)
- Protein orm1 (25 kDa, Protein from Saccharomyces cerevisiae)
- Serine palmitoyltransferase 2 (63 kDa, Protein from Saccharomyces cerevisiae)
- N-[(2s,3s,4r)-1,3,4-trihydroxyoctadecan-2-yl]hexacosanamide (696 Da, Ligand)
- Pyridoxal-5'-phosphate (247 Da, Ligand)
- 2-{[(4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25r)-spirost-5-en-3-yl]oxy}butyl 4-o-alpha-d-glucopyranosyl-alpha-d-glucopyranoside (1 kDa, Ligand)