Structure of inactive Photosystem II associated with CAC antenna from Rhodomonas Salina
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8xlp
Q-score: 0.598
Nat Commun (2024) 15 pp. 6812-6812 [ DOI: doi:10.1038/s41467-024-51206-y Pubmed: 39122741 ]
- Photosystem ii reaction center protein h (7 kDa, Protein from Rhodomonas salina)
- Chlorophyll c2 (608 Da, Ligand)
- Cac1 (25 kDa, Protein from Rhodomonas salina)
- Cac6 (24 kDa, Protein from Rhodomonas salina)
- Cac5 (24 kDa, Protein from Rhodomonas salina)
- Photosystem ii reaction center protein l (4 kDa, Protein from Rhodomonas salina)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem ii protein w (7 kDa, Protein from Rhodomonas salina)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Ncp (30 kDa, Protein from Rhodomonas salina)
- Photosystem ii d2 protein (39 kDa, Protein from Rhodomonas salina)
- Photosystem ii protein m (4 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e})-3,7,12,16-tetramethyl-18-[(4~{r})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol (564 Da, Ligand)
- 1,3,3-trimethyl-2-[(1e,3e,5e,7e,9e,11e,13e,15e,17e)-3,7,12,16-tetramethyl-18-[(1r)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene (536 Da, Ligand)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Bicarbonate ion (61 Da, Ligand)
- Cytochrome b559 subunit alpha (9 kDa, Protein from Rhodomonas salina)
- Photosystem ii reaction center protein i (4 kDa, Protein from Rhodomonas salina)
- Pheophytin a (871 Da, Ligand)
- Photosystem ii reaction center x protein (4 kDa, Protein from Rhodomonas salina)
- Fe (ii) ion (55 Da, Ligand)
- Manganese (ii) ion (54 Da, Ligand)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol (550 Da, Ligand)
- Cac4 (23 kDa, Protein from Rhodomonas salina)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cac2 (23 kDa, Protein from Rhodomonas salina)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Photosystem ii cp43 reaction center protein (53 kDa, Protein from Rhodomonas salina)
- Chlorophyll a (893 Da, Ligand)
- Water (18 Da, Ligand)
- Photosystem ii protein d1 (36 kDa, Protein from Rhodomonas salina)
- Photosystem ii reaction center protein t (3 kDa, Protein from Rhodomonas salina)
- Photosystem ii reaction center protein z (6 kDa, Protein from Rhodomonas salina)
- Cac3 (23 kDa, Protein from Rhodomonas salina)
- Cytochrome b559 subunit beta (4 kDa, Protein from Rhodomonas salina)
- Photosystem ii reaction center protein psb30 (3 kDa, Protein from Rhodomonas salina)
- Photosystem ii reaction center protein k (5 kDa, Protein from Rhodomonas salina)
- Chloride ion (35 Da, Ligand)
- Photosystem ii cp47 reaction center protein (56 kDa, Protein from Rhodomonas salina)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Inactive photosystem ii associated with chlorophyll a/c binding protein (Complex from Rhodomonas salina)
The structure of PSI-CAC(L-14)of R.salina at 2.7 angstroms resolution
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8wm6
Q-score: 0.62
Zhang S, Si L, Su X, Zhao X, An X, Li M
Commun Biol (2024) 7 pp. 560-560 [ DOI: doi:10.1038/s42003-024-06268-5 Pubmed: 38734819 ]
- Chlorophyll c2 (608 Da, Ligand)
- Psao (15 kDa, Protein from Rhodomonas salina)
- Cac-a (23 kDa, Protein from Rhodomonas salina)
- Chain s (27 kDa, Protein from Rhodomonas salina)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Rhodomonas salina)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Psi-cac (800 kDa, Complex from Rhodomonas salina)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Cac-n (22 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e})-3,7,12,16-tetramethyl-18-[(4~{r})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol (564 Da, Ligand)
- 1,3,3-trimethyl-2-[(1e,3e,5e,7e,9e,11e,13e,15e,17e)-3,7,12,16-tetramethyl-18-[(1r)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene (536 Da, Ligand)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Cac-l (25 kDa, Protein from Rhodomonas salina)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Rhodomonas salina)
- Photosystem i iron-sulfur center (8 kDa, Protein from Rhodomonas salina)
- Cac-k (25 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit iv (7 kDa, Protein from Rhodomonas salina)
- Cac-i (23 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit ii (15 kDa, Protein from Rhodomonas salina)
- Cac-h (23 kDa, Protein from Rhodomonas salina)
- Cac-g (26 kDa, Protein from Rhodomonas salina)
- Dodecyl-alpha-d-maltoside (510 Da, Ligand)
- Cac-c (23 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol (550 Da, Ligand)
- Photosystem i reaction center subunit xi (16 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit psak (8 kDa, Protein from Rhodomonas salina)
- Phylloquinone (450 Da, Ligand)
- Photosystem i reaction center subunit iii (20 kDa, Protein from Rhodomonas salina)
- Psaq (23 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Rhodomonas salina)
- Chlorophyll a (893 Da, Ligand)
- Water (18 Da, Ligand)
- Cac-d (22 kDa, Protein from Rhodomonas salina)
- Cac-e (21 kDa, Protein from Rhodomonas salina)
- Iron/sulfur cluster (351 Da, Ligand)
- Psar (13 kDa, Protein from Rhodomonas salina)
- Cac-f (22 kDa, Protein from Rhodomonas salina)
- Cac-b (23 kDa, Protein from Rhodomonas salina)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Rhodomonas salina)
structure of PSI-11CAC complex at Logrithmic growth phase
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8wmj
Q-score: 0.553
Zhang S, Si L, Su X, Zhao X, An X, Li M
Commun Biol (2024) 7 pp. 560-560 [ DOI: doi:10.1038/s42003-024-06268-5 Pubmed: 38734819 ]
- Cac-a (23 kDa, Protein from Rhodomonas salina)
- Chlorophyll c2 (608 Da, Ligand)
- Cac-d (22 kDa, Protein from Rhodomonas salina)
- Chain s (27 kDa, Protein from Rhodomonas salina)
- Cac-l (25 kDa, Protein from Rhodomonas salina)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Rhodomonas salina)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Cac-b (23 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e})-3,7,12,16-tetramethyl-18-[(4~{r})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol (564 Da, Ligand)
- 1,3,3-trimethyl-2-[(1e,3e,5e,7e,9e,11e,13e,15e,17e)-3,7,12,16-tetramethyl-18-[(1r)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene (536 Da, Ligand)
- Cac-c (23 kDa, Protein from Rhodomonas salina)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Cac-i (23 kDa, Protein from Rhodomonas salina)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Rhodomonas salina)
- Photosystem i iron-sulfur center (8 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit iv (7 kDa, Protein from Rhodomonas salina)
- Dodecyl-alpha-d-maltoside (510 Da, Ligand)
- Photosystem i reaction center subunit ii (15 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol (550 Da, Ligand)
- Photosystem i reaction center subunit xi (16 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit psak (8 kDa, Protein from Rhodomonas salina)
- Phylloquinone (450 Da, Ligand)
- Cac-j (22 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit iii (20 kDa, Protein from Rhodomonas salina)
- Psaq (23 kDa, Protein from Rhodomonas salina)
- Psi-cac (Complex from Rhodomonas salina)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Rhodomonas salina)
- Chlorophyll a (893 Da, Ligand)
- Cac-k (25 kDa, Protein from Rhodomonas salina)
- Water (18 Da, Ligand)
- Cac-h (23 kDa, Protein from Rhodomonas salina)
- Iron/sulfur cluster (351 Da, Ligand)
- Psar (13 kDa, Protein from Rhodomonas salina)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Rhodomonas salina)
- Cac-n (22 kDa, Protein from Rhodomonas salina)
The structure of PSI-14CAC complex at stationary growth phase
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 8wmv
Q-score: 0.555
Zhang S, Si L, Su X, Zhao X, An X, Li M
Commun Biol (2024) 7 pp. 560-560 [ DOI: doi:10.1038/s42003-024-06268-5 Pubmed: 38734819 ]
- Cac-a (23 kDa, Protein from Rhodomonas salina)
- Chlorophyll c2 (608 Da, Ligand)
- Psao (15 kDa, Protein from Rhodomonas salina)
- Cac-d (22 kDa, Protein from Rhodomonas salina)
- Chain s (27 kDa, Protein from Rhodomonas salina)
- Cac-m, cac-f (22 kDa, Protein from Rhodomonas salina)
- Cac-l (25 kDa, Protein from Rhodomonas salina)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Rhodomonas salina)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Cac-b (23 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e})-3,7,12,16-tetramethyl-18-[(4~{r})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol (564 Da, Ligand)
- 1,3,3-trimethyl-2-[(1e,3e,5e,7e,9e,11e,13e,15e,17e)-3,7,12,16-tetramethyl-18-[(1r)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene (536 Da, Ligand)
- Cac-c (23 kDa, Protein from Rhodomonas salina)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Cac-i (23 kDa, Protein from Rhodomonas salina)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Rhodomonas salina)
- Photosystem i iron-sulfur center (8 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit iv (7 kDa, Protein from Rhodomonas salina)
- Dodecyl-alpha-d-maltoside (510 Da, Ligand)
- Photosystem i reaction center subunit ii (15 kDa, Protein from Rhodomonas salina)
- Cac-e (21 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol (550 Da, Ligand)
- Photosystem i reaction center subunit xi (16 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit psak (8 kDa, Protein from Rhodomonas salina)
- Cac-g (26 kDa, Protein from Rhodomonas salina)
- Phylloquinone (450 Da, Ligand)
- Photosystem i reaction center subunit iii (20 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Rhodomonas salina)
- Chlorophyll a (893 Da, Ligand)
- Cac-k (25 kDa, Protein from Rhodomonas salina)
- Water (18 Da, Ligand)
- Cac-h (23 kDa, Protein from Rhodomonas salina)
- Iron/sulfur cluster (351 Da, Ligand)
- Psar (13 kDa, Protein from Rhodomonas salina)
- Psi-14cac(l-phase) (Complex from Rhodomonas salina)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Rhodomonas salina)
- Cac-n (22 kDa, Protein from Rhodomonas salina)
The structure of PSI-11CAC at the stationary growth phase
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8wmw
Q-score: 0.526
Zhang S, Si L, Su X, Zhao X, An X, Li M
Commun Biol (2024) 7 pp. 560-560 [ DOI: doi:10.1038/s42003-024-06268-5 Pubmed: 38734819 ]
- Cac-a (23 kDa, Protein from Rhodomonas salina)
- Chlorophyll c2 (608 Da, Ligand)
- Psao (15 kDa, Protein from Rhodomonas salina)
- Cac-d (22 kDa, Protein from Rhodomonas salina)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Rhodomonas salina)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Cac-b (23 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e})-3,7,12,16-tetramethyl-18-[(4~{r})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol (564 Da, Ligand)
- 1,3,3-trimethyl-2-[(1e,3e,5e,7e,9e,11e,13e,15e,17e)-3,7,12,16-tetramethyl-18-[(1r)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene (536 Da, Ligand)
- Cac-c (23 kDa, Protein from Rhodomonas salina)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Pigment binding protein complex (Complex from Rhodomonas salina)
- Cac-i (23 kDa, Protein from Rhodomonas salina)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Rhodomonas salina)
- Photosystem i iron-sulfur center (8 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit iv (7 kDa, Protein from Rhodomonas salina)
- Dodecyl-alpha-d-maltoside (510 Da, Ligand)
- Photosystem i reaction center subunit ii (15 kDa, Protein from Rhodomonas salina)
- Cac-e (21 kDa, Protein from Rhodomonas salina)
- (1~{r})-3,5,5-trimethyl-4-[(3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol (550 Da, Ligand)
- Photosystem i reaction center subunit xi (16 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit psak (8 kDa, Protein from Rhodomonas salina)
- Cac-f (22 kDa, Protein from Rhodomonas salina)
- Cac-g (26 kDa, Protein from Rhodomonas salina)
- Phylloquinone (450 Da, Ligand)
- Photosystem i reaction center subunit iii (20 kDa, Protein from Rhodomonas salina)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Rhodomonas salina)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Rhodomonas salina)
- Chlorophyll a (893 Da, Ligand)
- Water (18 Da, Ligand)
- Cac-h (23 kDa, Protein from Rhodomonas salina)
- Iron/sulfur cluster (351 Da, Ligand)
- Psar (13 kDa, Protein from Rhodomonas salina)
- Cac-k (25 kDa, Protein from Rhodomonas salina)
Human KCNQ2-CaM in complex with CBD and PIP2
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8j01
Q-score: 0.421
Ma D, Zheng Y, Li X, Zhou X, Yang Z, Zhang Y, Wang L, Zhang W, Fang J, Zhao G, Hou P, Nan F, Yang W, Su N, Gao Z, Guo J
Nat Commun (2023) 14 pp. 6632-6632 [ Pubmed: 37857637 DOI: doi:10.1038/s41467-023-42416-x ]
- Human kcnq2-cam in complex with cbd and pip2 (Complex from Homo sapiens)
- Calmodulin-1 (19 kDa, Protein from Homo sapiens)
- Potassium voltage-gated channel subfamily kqt member 2 (73 kDa, Protein from Homo sapiens)
- Cannabidiol (314 Da, Ligand)
- [(2r)-2-octanoyloxy-3-[oxidanyl-[(1r,2r,3s,4r,5r,6s)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate (746 Da, Ligand)
Human KCNQ2(F104A)-CaM-PIP2-CBD complex in state II
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8j02
Q-score: 0.348
Ma D, Zheng Y, Li X, Zhou X, Yang Z, Zhang Y, Wang L, Zhang W, Fang J, Zhao G, Hou P, Nan F, Yang W, Su N, Gao Z, Guo J
Nat Commun (2023) 14 pp. 6632-6632 [ Pubmed: 37857637 DOI: doi:10.1038/s41467-023-42416-x ]
- Human kcnq2(f104a)-cam-pip2-cbd complex in state ii (Complex from Homo sapiens)
- Calmodulin-1 (19 kDa, Protein from Homo sapiens)
- Potassium voltage-gated channel subfamily kqt member 2 (73 kDa, Protein from Homo sapiens)
- Cannabidiol (314 Da, Ligand)
- [(2r)-2-octanoyloxy-3-[oxidanyl-[(1r,2r,3s,4r,5r,6s)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate (746 Da, Ligand)
human KCNQ2-CaM in complex with PIP2 and HN37
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8w4u
Q-score: 0.354
Ma D, Zheng Y, Li X, Zhou X, Yang Z, Zhang Y, Wang L, Zhang W, Fang J, Zhao G, Hou P, Nan F, Yang W, Su N, Gao Z, Guo J
Nat Commun (2023) 14 pp. 6632-6632 [ Pubmed: 37857637 DOI: doi:10.1038/s41467-023-42416-x ]
- Methyl n-[4-[(4-fluorophenyl)methyl-prop-2-ynyl-amino]-2,6-dimethyl-phenyl]carbamate (340 Da, Ligand)
- Human kcnq2-cam in complex with pip2 and hn37 (Cellular component from Homo sapiens)
- Potassium voltage-gated channel subfamily kqt member 2 (73 kDa, Protein from Homo sapiens)
- [(2r)-2-octanoyloxy-3-[oxidanyl-[(1r,2r,3s,4r,5r,6s)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate (746 Da, Ligand)
- Calmodulin-1 (16 kDa, Protein from Homo sapiens)
DmDcr-2/R2D2/LoqsPD with 50bp-dsRNA in Dimer state
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 8hf0
Q-score: 0.372
Deng T, Su S, Yuan X, He J, Huang Y, Ma J, Wang J
Nat Commun (2023) 14 pp. 5228-5228 [ DOI: doi:10.1038/s41467-023-40919-1 Pubmed: 37633971 ]
- Dmdcr-2/r2d2/loqspd with 50bp-dsrna in dimer state (300 kDa, Complex from Drosophila melanogaster)
- Rna (52-mer) (16 kDa, RNA from Drosophila melanogaster)
- Loquacious, isoform d (38 kDa, Protein from Drosophila melanogaster)
- Ld06392p (35 kDa, Protein from Drosophila melanogaster)
- Dicer-2, isoform a (198 kDa, Protein from Drosophila melanogaster)
DmDcr-2/R2D2/LoqsPD with 19bp-dsRNA in Trimer state
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8hf1
Q-score: 0.307
Deng T, Su S, Yuan X, He J, Huang Y, Ma J, Wang J
Nat Commun (2023) 14 pp. 5228-5228 [ DOI: doi:10.1038/s41467-023-40919-1 Pubmed: 37633971 ]
- Loquacious, isoform d (2 kDa, Protein from Drosophila melanogaster)
- Rna (5'-r(p*gp*ap*gp*ap*cp*up*up*gp*g)-3') (2 kDa, RNA from Drosophila melanogaster)
- Ld06392p (14 kDa, Protein from Drosophila melanogaster)
- Rna (5'-r(p*cp*cp*ap*ap*gp*up*cp*up*cp*up*u)-3') (3 kDa, RNA from Drosophila melanogaster)
- Dmdcr-2/r2d2/loqspd with 19bp-dsrna in trimer state (300 kDa, Complex from Drosophila melanogaster)
- Dicer-2, isoform a (197 kDa, Protein from Drosophila melanogaster)