Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7deg
Q-score: 0.534
Zhu G, Zeng H, Zhang S, Juli J, Tai L, Zhang D, Pang X, Zhang Y, Lam SM, Zhu Y, Peng G, Michel H, Sun F
Angew Chem Int Ed Engl (2021) 60 pp. 13323-13330 [ DOI: doi:10.1002/anie.202016785 Pubmed: 33665933 ]
- Heme-as (920 Da, Ligand)
- 2-[(2~{e},6~{e},10~{z},14~{z},18~{z},23~{r})-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18-pentaenyl]naphthalene-1,4-dione (639 Da, Ligand)
- Cytochrome oxidase subunit iia (3 kDa, Protein from Aquifex aeolicus)
- Copper (ii) ion (63 Da, Ligand)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Cytochrome oxidase subunit ii (16 kDa, Protein from Aquifex aeolicus)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Dinuclear copper ion (127 Da, Ligand)
- Cytochrome c oxidase (respiratory complex iv) (Complex from Aquifex aeolicus VF5)
- Cytochrome c oxidase subunit i (65 kDa, Protein from Aquifex aeolicus (strain VF5))
Hyperthermophilic respiratory Complex III
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6kls
Q-score: 0.515
Zhu G, Zeng H, Zhang S, Juli J, Pang X, Hoffmann J, Zhang Y, Morgner N, Zhu Y, Peng G, Michel H, Sun F
Angew Chem Int Ed Engl (2020) 59 pp. 343-351 [ DOI: doi:10.1002/anie.201911554 Pubmed: 31778296 ]
- Cytochrome c (27 kDa, Protein from Aquifex aeolicus (strain VF5))
- The cytochrome bc1 complex (respiratory complex iii) (Complex from Aquifex aeolicus)
- 2-[(2~{e},6~{e},10~{z},14~{z},18~{z},23~{r})-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18-pentaenyl]naphthalene-1,4-dione (639 Da, Ligand)
- Cytochrome b subunit (47 kDa, Protein from Aquifex aeolicus)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Rieske-i iron sulfur protein (19 kDa, Protein from Aquifex aeolicus (strain VF5))
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Heme c (618 Da, Ligand)
Hyperthermophilic respiratory Complex III
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6klv
Q-score: -0.007
Zhu G, Zeng H, Zhang S, Juli J, Pang X, Hoffmann J, Zhang Y, Morgner N, Zhu Y, Peng G, Michel H, Sun F
Angew Chem Int Ed Engl (2020) 59 pp. 343-351 [ DOI: doi:10.1002/anie.201911554 Pubmed: 31778296 ]
- Cytochrome c (27 kDa, Protein from Aquifex aeolicus (strain VF5))
- The cytochrome bc1 complex (respiratory complex iii) (Complex from Aquifex aeolicus)
- 2-[(2~{e},6~{e},10~{z},14~{z},18~{z},23~{r})-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18-pentaenyl]naphthalene-1,4-dione (639 Da, Ligand)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Rieske-i iron sulfur protein (19 kDa, Protein from Aquifex aeolicus (strain VF5))
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Antimycin (534 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Heme c (618 Da, Ligand)
- Cytochrome b (47 kDa, Protein from Aquifex aeolicus)