nhTMEM16 R432A mutant in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 8tpo
Q-score: 0.467
Feng Z, Alvarenga OE, Accardi A
Nat Struct Mol Biol (2024) 31 pp. 1468-1481 [ Pubmed: 38684930 DOI: doi:10.1038/s41594-024-01284-9 ]
- Dimeric lipid scramblase nhtmem16 (Complex from Fusarium vanettenii)
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Lipid scramblase nhtmem16 (83 kDa, Protein from Fusarium vanettenii)
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8toi
Q-score: 0.534
Feng Z, Alvarenga OE, Accardi A
Nat Struct Mol Biol (2024) 31 pp. 1468-1481 [ Pubmed: 38684930 DOI: doi:10.1038/s41594-024-01284-9 ]
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Lipid scramblase nhtmem16 (83 kDa, Protein from Fusarium vanettenii 77-13-4)
- Calcium ion (40 Da, Ligand)
- Dimeric lipid scramblase nhtmem16 (Complex from Fusarium vanettenii 77-13-4)
Resolution: 2.85 Å
EM Method: Single-particle
Fitted PDBs: 8tol
Q-score: 0.521
Feng Z, Alvarenga OE, Accardi A
Nat Struct Mol Biol (2024) 31 pp. 1468-1481 [ Pubmed: 38684930 DOI: doi:10.1038/s41594-024-01284-9 ]
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Lipid scramblase nhtmem16 (83 kDa, Protein from Fusarium vanettenii 77-13-4)
- Calcium ion (40 Da, Ligand)
- Dimeric lipid scramblase nhtmem16 (Complex from Fusarium vanettenii 77-13-4)
nhTMEM16 lipid scramblase in lipid nanodiscs with MSP1E3 scaffold protein in the absence of Ca2+
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8tpm
Q-score: 0.499
Feng Z, Alvarenga OE, Accardi A
Nat Struct Mol Biol (2024) 31 pp. 1468-1481 [ Pubmed: 38684930 DOI: doi:10.1038/s41594-024-01284-9 ]
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 8tpq
Q-score: 0.495
Feng Z, Alvarenga OE, Accardi A
Nat Struct Mol Biol (2024) 31 pp. 1468-1481 [ Pubmed: 38684930 DOI: doi:10.1038/s41594-024-01284-9 ]
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Dimeric lipid scramblase nhtmem16 (Complex from Fusarium vanettenii 77-13-4)
- Lipid scramblase nhtmem16 (83 kDa, Protein from Fusarium vanettenii 77-13-4)
Resolution: 2.85 Å
EM Method: Single-particle
Fitted PDBs: 8tpr
Q-score: 0.537
Feng Z, Alvarenga OE, Accardi A
Nat Struct Mol Biol (2024) 31 pp. 1468-1481 [ Pubmed: 38684930 DOI: doi:10.1038/s41594-024-01284-9 ]
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Dimeric lipid scramblase nhtmem16 (Complex from Fusarium vanettenii 77-13-4)
- Lipid scramblase nhtmem16 (83 kDa, Protein from Fusarium vanettenii 77-13-4)
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 8tps
Q-score: 0.519
Feng Z, Alvarenga OE, Accardi A
Nat Struct Mol Biol (2024) 31 pp. 1468-1481 [ Pubmed: 38684930 DOI: doi:10.1038/s41594-024-01284-9 ]
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Dimeric lipid scramblase nhtmem16 (Complex from Fusarium vanettenii 77-13-4)
- Lipid scramblase nhtmem16 (83 kDa, Protein from Fusarium vanettenii 77-13-4)
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 8tpt
Q-score: 0.525
Feng Z, Alvarenga OE, Accardi A
Nat Struct Mol Biol (2024) 31 pp. 1468-1481 [ Pubmed: 38684930 DOI: doi:10.1038/s41594-024-01284-9 ]
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Dimeric lipid scramblase nhtmem16 (Complex from Fusarium vanettenii 77-13-4)
- Lipid scramblase nhtmem16 (83 kDa, Protein from Fusarium vanettenii 77-13-4)
afTMEM16 in C22 lipid nanodiscs with MSP2N2 scaffold protein in the presnece of Ca2+
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7rwj
Q-score: 0.484
Falzone ME, Feng Z, Alvarenga OE, Pan Y, Lee B, Cheng X, Fortea E, Scheuring S, Accardi A
Nat Commun (2022) 13 pp. 2604-2604 [ DOI: doi:10.1038/s41467-022-30300-z Pubmed: 35562175 ]
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Aftmem16 scramblase c22 lipid nanodiscs with msp2n2 scaffold in the presence of ca2+ (Complex from Aspergillus fumigatus)
- Calcium ion (40 Da, Ligand)
- Plasma membrane channel protein (aqy1), putative (84 kDa, Protein from Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100))
afTMEM16 in C22 lipid nanodiscs with MSP1E3 scaffold protein in the presnece of Ca2+
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7rx2
Q-score: 0.632
Falzone ME, Feng Z, Alvarenga OE, Pan Y, Lee B, Cheng X, Fortea E, Scheuring S, Accardi A
Nat Commun (2022) 13 pp. 2604-2604 [ DOI: doi:10.1038/s41467-022-30300-z Pubmed: 35562175 ]
- Aftmem16 lipid scramblase (84 kDa, Protein from Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163))
- Calcium ion (40 Da, Ligand)
- Aftmem16 scramblase c22 lipid nanodiscs with msp1e3 scaffold in the presence of ca2+ (Complex from Aspergillus fumigatus)
- (1r)-2-{[(s)-{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9z)-octadec-9-enoate (749 Da, Ligand)
- Water (18 Da, Ligand)