Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (Protein from Sus scrofa)
- Transcription elongation factor spt4 (Protein from Homo sapiens)
- Rna polymerase ii subunit f (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb3 (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb9 (Protein from Sus scrofa)
- Rna polymerase ii subunit d (Protein from Sus scrofa)
- Ell-associated factor 1 (Protein from Homo sapiens)
- Rna polymerase ii subunit g (Protein from Sus scrofa)
- Rna polymerase ii subunit k (Protein from Sus scrofa)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif, ell2 and eaf1 (Complex)
- Rna polymerase ii subunit e (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb1 (Protein from Sus scrofa)
- Transcription elongation factor (Complex from Homo sapiens)
- Transcription elongation factor spt5 (Protein from Homo sapiens)
- Dna and rna (Complex from HIV whole-genome vector AA1305#18)
- Elongation and assocation factor (Complex from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb11-a (Protein from Sus scrofa)
- Rna polymerase (Complex from Sus scrofa)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (Protein from Sus scrofa)
- Rna (RNA from HIV whole-genome vector AA1305#18)
- Non-template dna (DNA from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase subunit beta (Protein from Sus scrofa)
- Template dna (DNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii elongation factor ell2 (Protein from Homo sapiens)
Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Transcription elongation factor spt4 (Protein from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (Protein from pig)
- Dna-directed rna polymerase ii subunit rpb3 (Protein from pig)
- Rna polymerase ii subunit e (Protein from pig)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (Protein from pig)
- Ell-associated factor 1 (Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb9 (Protein from pig)
- Dna-directed rna polymerase ii subunit rpb1 (Protein from pig)
- Elongation and association factor (Complex from Homo sapiens)
- Dna-directed rna polymerase subunit beta (Protein from pig)
- Dna-directed rna polymerase ii subunit rpb11-a (Protein from pig)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif, ell2 and eaf1 (Complex)
- Rna polymerase ii subunit d (Protein from pig)
- Transcription elongation factor spt5 (Protein from Homo sapiens)
- Dna and rna (Complex from HIV whole-genome vector AA1305#18)
- Rna (RNA from HIV whole-genome vector AA1305#18)
- Rna polymerase (Complex from Sus scrofa)
- Non-template dna (DNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii subunit k (Protein from pig)
- Rna polymerase ii subunit f (Protein from pig)
- Rna polymerase ii subunit g (Protein from pig)
- Template dna (DNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii elongation factor ell2 (Protein from Homo sapiens)
- Transcription elongation factor (Complex from Homo sapiens)
Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (Protein from Sus scrofa)
- Transcription elongation factor spt4 (Protein from Homo sapiens)
- Rna polymerase ii subunit f (Protein from Sus scrofa)
- Rna (Complex from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase ii subunit rpb3 (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb9 (Protein from Sus scrofa)
- Rna polymerase ii subunit d (Protein from Sus scrofa)
- Ell-associated factor 1 (Protein from Homo sapiens)
- Rna polymerase ii subunit g (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit beta (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb11 (Protein from Sus scrofa)
- Rna polymerase ii subunit k (Protein from Sus scrofa)
- Dna-directed rna polymerase (Complex from Sus scrofa)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif, ell2 and eaf1 (Complex)
- Rna polymerase ii subunit e (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb1 (Protein from Sus scrofa)
- Transcription elongation factor spt5 (Protein from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (Protein from Sus scrofa)
- Rna (RNA from HIV whole-genome vector AA1305#18)
- Non-template dna (DNA from HIV whole-genome vector AA1305#18)
- Template dna (DNA from HIV whole-genome vector AA1305#18)
- Elongation factors (Complex from Homo sapiens)
- Rna polymerase ii elongation factor ell2 (Protein from Homo sapiens)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7okx
Q-score: 0.571
Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Dna-directed rna polymerase subunit beta (142 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit f (14 kDa, Protein from Sus scrofa)
- Transcription elongation factor spt5 (Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Elongation and association factors (Complex from Homo sapiens)
- Rna_pol_l_2 domain-containing protein (13 kDa, Protein from Sus scrofa)
- Rna (15 kDa, RNA from HIV whole-genome vector AA1305#18)
- Transcription elongation factor spt5 (121 kDa, Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb3 (31 kDa, Protein from Sus scrofa)
- Dna and rna (Complex from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase ii subunit rpb7 (19 kDa, Protein from Sus scrofa)
- Rna polymerase ii subunit d (20 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb1 (217 kDa, Protein from Sus scrofa)
- Rna polymerase (Complex from Sus scrofa)
- Template dna (14 kDa, DNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii elongation factor ell2 (72 kDa, Protein from Homo sapiens)
- Non-template dna (14 kDa, DNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii subunit k (7 kDa, Protein from Sus scrofa)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif(spt5-kow5)and ell2-eaf1 (Complex)
- Dna-directed rna polymerase ii subunit e (24 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (17 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb9 (14 kDa, Protein from Sus scrofa)
- Ell-associated factor 1 (29 kDa, Protein from Homo sapiens)
Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (Protein from Sus scrofa)
- Transcription elongation factor spt4 (Protein from Homo sapiens)
- Rna polymerase ii subunit f (Protein from Sus scrofa)
- Rna (Complex from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase ii subunit rpb3 (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb9 (Protein from Sus scrofa)
- Rna polymerase ii subunit d (Protein from Sus scrofa)
- Ell-associated factor 1 (Protein from Homo sapiens)
- Rna polymerase ii subunit g (Protein from Sus scrofa)
- Dna-directed rna polymerase (Complex from Sus scrofa)
- Rna polymerases i, ii, and iii subunit rpabc3 (Protein from Sus scrofa)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif, ell2 and eaf1 (Complex)
- Rna polymerase ii subunit e (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb1 (Protein from Sus scrofa)
- Transcription elongation factor spt5 (Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb11-a (Protein from Sus scrofa)
- Rna (RNA from HIV whole-genome vector AA1305#18)
- Non-template dna (DNA from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase subunit beta (Protein from Sus scrofa)
- Template dna (DNA from HIV whole-genome vector AA1305#18)
- Elongation factors (Complex from Homo sapiens)
- Rna polymerase ii elongation factor ell2 (Protein from Homo sapiens)
- Pig rna polymerase ii subunit k (Protein from Sus scrofa)
Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Template dna (DNA from HIV whole-genome vector AA1305#18)
- Rna (Complex from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase ii subunit rpb9 (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb3 (Protein from Sus scrofa)
- Rna polymerase ii subunit k (Protein from Sus scrofa)
- Rna polymerase ii subunit f (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit beta (Protein from Sus scrofa)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (Protein from Sus scrofa)
- Rna polymerase ii subunit e (Protein from Sus scrofa)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif, ell2 and eaf1 (Complex)
- Dna-directed rna polymerase ii subunit rpb11-a (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb1 (Protein from Sus scrofa)
- Transcription elongation factor spt5 (Protein from Homo sapiens)
- Ell-associated factor 1 (Protein from Homo sapiens)
- Transcription elongation factor spt4 (Protein from Homo sapiens)
- Rna polymerase ii subunit d (Protein from Sus scrofa)
- Dna-directed rna polymerase (Complex from Sus scrofa)
- Non-template dna (DNA from HIV whole-genome vector AA1305#18)
- Rna (RNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii subunit g (Protein from Sus scrofa)
- Elongation factors (Complex from Homo sapiens)
- Rna polymerase ii elongation factor ell2 (Protein from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (Protein from Sus scrofa)
Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Rna polymerases i, ii, and iii subunit rpabc3 (Protein from Sus scrofa)
- Template dna (DNA from HIV whole-genome vector AA1305#18)
- Rna (Complex from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase ii subunit rpb9 (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb3 (Protein from Sus scrofa)
- Rna polymerase ii subunit k (Protein from Sus scrofa)
- Rna polymerase ii subunit f (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit beta (Protein from Sus scrofa)
- Rna polymerase ii subunit e (Protein from Sus scrofa)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif, ell2 and eaf1 (Complex)
- Dna-directed rna polymerase ii subunit rpb11-a (Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb1 (Protein from Sus scrofa)
- Transcription elongation factor spt5 (Protein from Homo sapiens)
- Ell-associated factor 1 (Protein from Homo sapiens)
- Transcription elongation factor spt4 (Protein from Homo sapiens)
- Rna polymerase ii subunit d (Protein from Sus scrofa)
- Dna-directed rna polymerase (Complex from Sus scrofa)
- Rna (RNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii subunit g (Protein from Sus scrofa)
- Non-template dna (DNA from HIV whole-genome vector AA1305#18)
- Elongation factors (Complex from Homo sapiens)
- Rna polymerase ii elongation factor ell2 (Protein from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (Protein from Sus scrofa)
Structure of active transcription elongation complex Pol II-DSIF-ELL2-EAF1, composite map 2
Resolution: 4.14 Å
EM Method: Single-particle
Fitted PDBs: 7oky
Q-score: 0.387
Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Rna and dna (Complex from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase subunit beta (142 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit f (14 kDa, Protein from Sus scrofa)
- Zinc ion (65 Da, Ligand)
- Rna_pol_l_2 domain-containing protein (13 kDa, Protein from Sus scrofa)
- Rna (15 kDa, RNA from HIV whole-genome vector AA1305#18)
- Transcription elongation factor spt4 (13 kDa, Protein from Homo sapiens)
- Transcription elongation factor spt5 (121 kDa, Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb3 (31 kDa, Protein from Sus scrofa)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif and ell2, eaf1 (Complex)
- Dna-directed rna polymerase ii subunit rpb7 (19 kDa, Protein from Sus scrofa)
- Rna polymerase ii subunit d (20 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb1 (217 kDa, Protein from Sus scrofa)
- Rna polymerase (Complex from Sus scrofa)
- Template dna (14 kDa, DNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii elongation factor ell2 (72 kDa, Protein from Homo sapiens)
- Non-template dna (14 kDa, DNA from HIV whole-genome vector AA1305#18)
- Rna polymerase ii subunit k (7 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit e (24 kDa, Protein from Sus scrofa)
- Elongation and association factor (Complex from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (17 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb9 (14 kDa, Protein from Sus scrofa)
- Ell-associated factor 1 (29 kDa, Protein from Homo sapiens)
- Elongation factor (Complex from Homo sapiens)
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7ol0
Q-score: 0.558
Chen Y, Vos SM, Dienemann C, Ninov M, Urlaub H, Cramer P
Mol Cell (2021) 81 pp. 3386-3399.e10 [ Pubmed: 34265249 DOI: doi:10.1016/j.molcel.2021.06.019 ]
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (17 kDa, Protein from Sus scrofa)
- Transcription elongation complex of rna polymerase ii with elongation factors dsif (spt5-kow5) (Complex from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb9 (14 kDa, Protein from Sus scrofa)
- Non-template dna (14 kDa, DNA from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase subunit beta (142 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb3 (31 kDa, Protein from Sus scrofa)
- Rna polymerase ii subunit d (20 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit f (14 kDa, Protein from Sus scrofa)
- Template dna (14 kDa, DNA from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase ii subunit e (24 kDa, Protein from Sus scrofa)
- Rna (15 kDa, RNA from HIV whole-genome vector AA1305#18)
- Dna-directed rna polymerase ii subunit rpb7 (19 kDa, Protein from Sus scrofa)
- Dna-directed rna polymerase ii subunit rpb1 (217 kDa, Protein from Sus scrofa)
- Rna_pol_l_2 domain-containing protein (13 kDa, Protein from Sus scrofa)
- Transcription elongation factor spt5 (121 kDa, Protein from Homo sapiens)
- Rna polymerase ii subunit k (7 kDa, Protein from Sus scrofa)
- Zinc ion (65 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Sus scrofa)