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sample_name:"RNA POLYMERASE II" AND xref_links:"pdbekb" AND microscope_name:"FEI TECNAI ARCTICA"
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CryoEM structure of TR-TRAP

Release date: July 3, 2024
Resolution: 4.66 Å
EM Method: Single-particle
Fitted PDBs: 8t9d
Q-score: 0.215

Zhao H, Li J, Xiang Y, Malik S, Vartak SV, Veronezi GMB, Young N, Riney M, Kalchschmidt J, Conte A, Jung SK, Ramachandran S, Roeder RG, Shi Y, Casellas R, Asturias FJ

Mol Cell (2024) 84 pp. 2648-2664.e10 [ DOI: doi:10.1016/j.molcel.2024.06.006 Pubmed: 38955181 ]

Sample: [Show more]

RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-5) of the nucleosome

Release date: Feb. 20, 2019
Resolution: 7.9 Å
EM Method: Single-particle
Fitted PDBs: 6j4w
Q-score: 0.123

Ehara H, Kujirai T, Fujino Y, Shirouzu M, Kurumizaka H, Sekine SI

Science (2019) 363 pp. 744-747 [ Pubmed: 30733384 DOI: doi:10.1126/science.aav8912 ]

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RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome (+1A)

Release date: Feb. 20, 2019
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6j4x
Q-score: 0.233

Ehara H, Kujirai T, Fujino Y, Shirouzu M, Kurumizaka H, Sekine SI

Science (2019) 363 pp. 744-747 [ Pubmed: 30733384 DOI: doi:10.1126/science.aav8912 ]

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RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome (+1B)

Release date: Feb. 20, 2019
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6j4y
Q-score: 0.235

Ehara H, Kujirai T, Fujino Y, Shirouzu M, Kurumizaka H, Sekine SI

Science (2019) 363 pp. 744-747 [ Pubmed: 30733384 DOI: doi:10.1126/science.aav8912 ]

Sample: [Show more]

RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome

Release date: Feb. 20, 2019
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 6j4z
Q-score: 0.244

Ehara H, Kujirai T, Fujino Y, Shirouzu M, Kurumizaka H, Sekine SI

Science (2019) 363 pp. 744-747 [ Pubmed: 30733384 DOI: doi:10.1126/science.aav8912 ]

Sample: [Show more]

RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome (tilted conformation)

Release date: Feb. 20, 2019
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 6j50
Q-score: 0.195

Ehara H, Kujirai T, Fujino Y, Shirouzu M, Kurumizaka H, Sekine SI

Science (2019) 363 pp. 744-747 [ Pubmed: 30733384 DOI: doi:10.1126/science.aav8912 ]

Sample: [Show more]

RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome, weak Elf1 (+1 position)

Release date: Feb. 20, 2019
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6j51
Q-score: 0.23

Ehara H, Kujirai T, Fujino Y, Shirouzu M, Kurumizaka H, Sekine SI

Science (2019) 363 pp. 744-747 [ Pubmed: 30733384 DOI: doi:10.1126/science.aav8912 ]

Sample: [Show more]

RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome

Release date: Feb. 20, 2019
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6ir9
Q-score: 0.264

Ehara H, Kujirai T, Fujino Y, Shirouzu M, Kurumizaka H, Sekine SI

Science (2019) 363 pp. 744-747 [ Pubmed: 30733384 DOI: doi:10.1126/science.aav8912 ]

Sample: [Show more]

RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA

Release date: Oct. 3, 2018
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 6a5l
Q-score: 0.182

Kujirai T, Ehara H, Fujino Y, Shirouzu M, Sekine SI, Kurumizaka H

Science (2018) 362 pp. 595-598 [ Pubmed: 30287617 DOI: doi:10.1126/science.aau9904 ]

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RNA polymerase II elongation complex stalled at SHL(-6) of the nucleosome

Release date: Oct. 3, 2018
Resolution: 9.9 Å
EM Method: Single-particle
Fitted PDBs: 6a5o
Q-score: 0.083

Kujirai T, Ehara H, Fujino Y, Shirouzu M, Sekine SI, Kurumizaka H

Science (2018) 362 pp. 595-598 [ Pubmed: 30287617 DOI: doi:10.1126/science.aau9904 ]

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