Electron Microscopy Data Bank

EMD-19720

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RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state b (composite structure)

Release date: April 17, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8s54
Q-score: 0.368

Zhan Y, Grabbe F, Oberbeckmann E, Dienemann C, Cramer P

Mol Cell (2024) 84 pp. 1699-1710.e6 [ DOI: doi:10.1016/j.molcel.2024.03.016 Pubmed: 38604172 ]

Sample:

Dna-directed rna polymerase ii subunit rpb11-a (13 kDa, Protein from Sus scrofa)
Dna-directed rna polymerase ii subunit rpb9 (14 kDa, Protein from Sus scrofa)
General transcription factor iif subunit 1 (58 kDa, Protein from Homo sapiens)
Template dna (42 kDa, DNA from unidentified adenovirus)
Dna-directed rna polymerase ii subunit rpb7 (19 kDa, Protein from Sus scrofa)
Dna-directed rna polymerase ii subunit e (24 kDa, Protein from Sus scrofa)
Transcription factor iie subunit 1 and transcription factor iif (Complex from Homo sapiens)
Dna and rna (Complex from unidentified adenovirus)
General transcription factor iif subunit 2 (28 kDa, Protein from Homo sapiens)
General transcription factor iie subunit 1 (49 kDa, Protein from Homo sapiens)
Rna polymerase ii subunit d (20 kDa, Protein from Sus scrofa)
Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (17 kDa, Protein from Sus scrofa)
Dna-directed rna polymerase ii subunit rpb3 (31 kDa, Protein from Sus scrofa)
Dna-directed rna polymerases i, ii, and iii subunit rpabc2 (14 kDa, Protein from Sus scrofa)
Non-template dna (43 kDa, DNA from unidentified adenovirus)
Magnesium ion (24 Da, Ligand)
Dna-directed rna polymerase subunit (218 kDa, Protein from Sus scrofa)
Rna polymerase ii (Complex from Sus scrofa)
Zinc ion (65 Da, Ligand)
Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (7 kDa, Protein from Sus scrofa)
Rna (4 kDa, RNA from unidentified adenovirus)
Rna polymerase ii early elongation complex bound to tfiie and tfiif - state b (Complex)
Dna-directed rna polymerase subunit beta (147 kDa, Protein from Sus scrofa)
Rna polymerase ii subunit k (7 kDa, Protein from Sus scrofa)

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