The closed state of the ASFV apo-RNA polymerase
Resolution: 2.69 Å
EM Method: Single-particle
Fitted PDBs: 8q3b
Q-score: 0.54
Pilotto S, Sykora M, Cackett G, Dulson C, Werner F
Nat Commun (2024) 15 pp. 1606-1606 [ Pubmed: 38383525 DOI: doi:10.1038/s41467-024-45842-7 ]
- Dna-directed rna polymerase rpb10 homolog (9 kDa, Protein from African swine fever virus BA71V)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase rpb6 homolog (16 kDa, Protein from African swine fever virus BA71V)
- Uncharacterized protein c122r (11 kDa, Protein from African swine fever virus BA71V)
- Apo-form of the 8-subunit rna polymerase from african swine fever virus (450 kDa, Complex from African swine fever virus BA71V)
- Dna-directed rna polymerase rpb5 homolog (23 kDa, Protein from African swine fever virus BA71V)
- Zinc ion (65 Da, Ligand)
- Dna-directed rna polymerase rpb1 homolog (163 kDa, Protein from African swine fever virus BA71V)
- Dna-directed rna polymerase rpb2 homolog (140 kDa, Protein from African swine fever virus BA71V)
- Dna-directed rna polymerase rpb3-11 homolog (41 kDa, Protein from African swine fever virus BA71V)
- Dna-directed rna polymerase rpb7 homolog (38 kDa, Protein from African swine fever virus BA71V)
The open state of the ASFV apo-RNA polymerase
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 8q3k
Q-score: 0.531
Pilotto S, Sykora M, Cackett G, Dulson C, Werner F
Nat Commun (2024) 15 pp. 1606-1606 [ Pubmed: 38383525 DOI: doi:10.1038/s41467-024-45842-7 ]
- Dna-directed rna polymerase rpb10 homolog (9 kDa, Protein from African swine fever virus BA71V)
- Magnesium ion (24 Da, Ligand)
- Dna-directed rna polymerase rpb6 homolog (16 kDa, Protein from African swine fever virus BA71V)
- Uncharacterized protein c122r (11 kDa, Protein from African swine fever virus BA71V)
- Apo-form of the 8-subunit rna polymerase from african swine fever virus (450 kDa, Complex from African swine fever virus BA71V)
- Dna-directed rna polymerase rpb5 homolog (23 kDa, Protein from African swine fever virus BA71V)
- Zinc ion (65 Da, Ligand)
- Dna-directed rna polymerase rpb1 homolog (163 kDa, Protein from African swine fever virus BA71V)
- Dna-directed rna polymerase rpb2 homolog (140 kDa, Protein from African swine fever virus BA71V)
- Dna-directed rna polymerase rpb3-11 homolog (41 kDa, Protein from African swine fever virus BA71V)
- Dna-directed rna polymerase rpb7 homolog (38 kDa, Protein from African swine fever virus BA71V)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8dkc
Q-score: 0.32
Bu F, Wang X, Li M, Ma L, Wang C, Hu Y, Cao Z, Liu B
J Mol Biol (2024) 436 pp. 168568-168568 [ Pubmed: 38583515 DOI: doi:10.1016/j.jmb.2024.168568 ]
- Rna polymerase rpb6 (12 kDa, Protein from Porphyromonas gingivalis)
- Porphyromonas gingivalis rna polymerase (389 kDa, Complex from Porphyromonas gingivalis)
- Dna-directed rna polymerase subunit alpha (36 kDa, Protein from Porphyromonas gingivalis)
- Dna-directed rna polymerase subunit beta (142 kDa, Protein from Porphyromonas gingivalis)
- Dna-directed rna polymerase subunit beta' (161 kDa, Protein from Porphyromonas gingivalis)