Structure of Pol II-TC-NER-STK19 complex, consensus map
Ramadhin AR, Lee SH, Zhou D, Salmazo A, Gonzalo-Hansen C, van Sluis M, Blom CMA, Janssens RC, Raams A, Dekkers D, Bezstarosti K, Slade D, Vermeulen W, Pines A, Demmers JAA, Bernecky C, Sixma TK, Marteijn JA
Mol Cell (2024) 84 pp. 4740-4757.e12 [ Pubmed: 39547223 DOI: doi:10.1016/j.molcel.2024.10.030 ]
- Dna excision repair protein ercc-6 (Protein from Homo sapiens)
- Dna excision repair protein ercc-8 (Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb3 (Protein from Sus scrofa domesticus)
- Rna (RNA from Homo sapiens)
- Uv-stimulated scaffold protein a (Protein from Homo sapiens)
- Dna damage-binding protein 1 (Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb1 (Protein from Sus scrofa domesticus)
- Det1- and ddb1-associated protein 1 (Protein from Homo sapiens)
- Template strand dna (DNA from Homo sapiens)
- E3 ubiquitin-protein ligase rbx1 (Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb2 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc4 (Protein from Sus scrofa domesticus)
- Ternary complex of pol ii-tc-ner-stk19, consensus map (1 MDa, Complex from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb11-a (Protein from Sus scrofa domesticus)
- Transcription elongation factor 1 homolog (Protein from Homo sapiens)
- Nedd8 (Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb4 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerase ii subunit e (Protein from Sus scrofa domesticus)
- Non-template strand dna (DNA from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerase subunit rpb7 (Protein from Sus scrofa domesticus)
- Cullin-4a (Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb9 (Protein from Sus scrofa domesticus)
- Inactive serine/threonine-protein kinase 19 (Protein from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc2 (Protein from Sus scrofa domesticus)
Structure of Pol II-TC-NER-STK19 complex, focused on Pol II-ELOF1
Ramadhin AR, Lee SH, Zhou D, Salmazo A, Gonzalo-Hansen C, van Sluis M, Blom CMA, Janssens RC, Raams A, Dekkers D, Bezstarosti K, Slade D, Vermeulen W, Pines A, Demmers JAA, Bernecky C, Sixma TK, Marteijn JA
Mol Cell (2024) 84 pp. 4740-4757.e12 [ Pubmed: 39547223 DOI: doi:10.1016/j.molcel.2024.10.030 ]
- Dna-directed rna polymerases i, ii, and iii subunit rpabc5 (Protein from Sus scrofa domesticus)
- Template strand dna (DNA from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb9 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerase ii subunit rpb11-a (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerase ii subunit rpb2 (Protein from Sus scrofa domesticus)
- Transcription elongation factor 1 homolog (Protein from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb3 (Protein from Sus scrofa domesticus)
- Rna (RNA from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb4 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc4 (Protein from Sus scrofa domesticus)
- Uv-stimulated scaffold protein a (Protein from Homo sapiens)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc3 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerases i, ii, and iii subunit rpabc2 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerase subunit rpb7 (Protein from Sus scrofa domesticus)
- Dna-directed rna polymerase ii subunit e (Protein from Sus scrofa domesticus)
- Non-template strand dna (DNA from Homo sapiens)
- Dna-directed rna polymerase ii subunit rpb1 (Protein from Sus scrofa domesticus)
- Ternary complex of pol ii-tc-ner-stk19, focused on pol ii-elof1 (550 kDa, Complex from Homo sapiens)
human RNA polymerase II in complex with scAlu RNA
Kassube SA, Fang J, Grob P, Yakovchuk P, Goodrich JA, Nogales E
J Mol Biol (2013) 425 pp. 3639-3648 [ DOI: doi:10.1016/j.jmb.2012.08.024 Pubmed: 22954660 ]
- Rpb3 (30 kDa, Protein from Homo sapiens)
- Scalu (38 kDa, RNA from Homo sapiens)
- Rpb10 (10 kDa, Protein from Homo sapiens)
- Rpb4 (20 kDa, Protein from Homo sapiens)
- Human rna polymerase ii in complex with scalu rna (520 kDa, Sample)
- Rpb6 (10 kDa, Protein from Homo sapiens)
- Rpb9 (10 kDa, Protein from Homo sapiens)
- Rpb5 (20 kDa, Protein from Homo sapiens)
- Rpb8 (20 kDa, Protein from Homo sapiens)
- Rpb11 (10 kDa, Protein from Homo sapiens)
- Rpb2 (130 kDa, Protein from Homo sapiens)
- Rpb7 (20 kDa, Protein from Homo sapiens)
- Rpb1 (220 kDa, Protein from Homo sapiens)
- Rpb12 (10 kDa, Protein from Homo sapiens)
human RNA polymerase II in complex with Alu RNA
Kassube SA, Fang J, Grob P, Yakovchuk P, Goodrich JA, Nogales E
J Mol Biol (2013) 425 pp. 3639-3648 [ DOI: doi:10.1016/j.jmb.2012.08.024 Pubmed: 22954660 ]
- Rpb12 (10 kDa, Protein from Homo sapiens)
- Rpb8 (220 kDa, Protein from Homo sapiens)
- Rpb9 (10 kDa, Protein from Homo sapiens)
- Rpb5 (20 kDa, Protein from Homo sapiens)
- Rpb4 (20 kDa, Protein from Homo sapiens)
- Rpb7 (20 kDa, Protein from Homo sapiens)
- Rpb3 (30 kDa, Protein from Homo sapiens)
- Human rna polymerase ii in complex with alu rna (520 kDa, Sample)
- Rpb10 (10 kDa, Protein from Homo sapiens)
- Rpb11 (10 kDa, Protein from Homo sapiens)
- Rpb2 (220 kDa, Protein from Homo sapiens)
- Scalu (38 kDa, RNA from Homo sapiens)
- Rpb6 (10 kDa, Protein from Homo sapiens)
- Rpb1 (220 kDa, Protein from Homo sapiens)
human RNA polymerase II in complex with AluRA RNA
Kassube SA, Fang J, Grob P, Yakovchuk P, Goodrich JA, Nogales E
J Mol Biol (2013) 425 pp. 3639-3648 [ DOI: doi:10.1016/j.jmb.2012.08.024 Pubmed: 22954660 ]
- Rpb12 (10 kDa, Protein from Homo sapiens)
- Rpb5 (20 kDa, Protein from Homo sapiens)
- Rpb9 (10 kDa, Protein from Homo sapiens)
- Rpb3 (30 kDa, Protein from Homo sapiens)
- Rpb2 (130 kDa, Protein from Homo sapiens)
- Rpb4 (20 kDa, Protein from Homo sapiens)
- Rpb7 (20 kDa, Protein from Homo sapiens)
- Rpb10 (10 kDa, Protein from Homo sapiens)
- Rpb11 (10 kDa, Protein from Homo sapiens)
- Human rna polymerase ii in complex with alura rna (520 kDa, Sample)
- Rpb6 (10 kDa, Protein from Homo sapiens)
- Rpb1 (220 kDa, Protein from Homo sapiens)
- Alura (47 kDa, RNA from Homo sapiens)
- Rpb8 (20 kDa, Protein from Homo sapiens)
human RNA polymerase II in complex with B2 RNA
Kassube SA, Fang J, Grob P, Yakovchuk P, Goodrich JA, Nogales E
J Mol Biol (2013) 425 pp. 3639-3648 [ DOI: doi:10.1016/j.jmb.2012.08.024 Pubmed: 22954660 ]
- Human rna polymerase ii in complex with b2 rna (520 kDa, Sample)
- Rpb12 (10 kDa, Protein from Homo sapiens)
- Rpb9 (10 kDa, Protein from Homo sapiens)
- Rpb5 (20 kDa, Protein from Homo sapiens)
- Rpb4 (20 kDa, Protein from Homo sapiens)
- B2 rna (57 kDa, RNA from Mus musculus)
- Rpb7 (20 kDa, Protein from Homo sapiens)
- Rpb3 (30 kDa, Protein from Homo sapiens)
- Rpb2 (130 kDa, Protein from Homo sapiens)
- Rpb10 (10 kDa, Protein from Homo sapiens)
- Rpb11 (10 kDa, Protein from Homo sapiens)
- Rpb6 (10 kDa, Protein from Homo sapiens)
- Rpb1 (220 kDa, Protein from Homo sapiens)
- Rpb8 (20 kDa, Protein from Homo sapiens)
human RNA polymerase II in complex with B2 81-131 RNA
Kassube SA, Fang J, Grob P, Yakovchuk P, Goodrich JA, Nogales E
J Mol Biol (2013) 425 pp. 3639-3648 [ DOI: doi:10.1016/j.jmb.2012.08.024 Pubmed: 22954660 ]
- Rpb12 (10 kDa, Protein from Homo sapiens)
- Human rna polymerase ii in complex with b2 81-131 rna (520 kDa, Sample)
- Rpb9 (10 kDa, Protein from Homo sapiens)
- Rpb5 (20 kDa, Protein from Homo sapiens)
- Rpb4 (20 kDa, Protein from Homo sapiens)
- Rpb7 (20 kDa, Protein from Homo sapiens)
- Rpb3 (30 kDa, Protein from Homo sapiens)
- Rpb2 (130 kDa, Protein from Homo sapiens)
- Rpb10 (10 kDa, Protein from Homo sapiens)
- Rpb11 (10 kDa, Protein from Homo sapiens)
- Rpb6 (10 kDa, Protein from Homo sapiens)
- Rpb1 (220 kDa, Protein from Homo sapiens)
- B2 81-131 rna (16 kDa, RNA from Mus musculus)
- Rpb8 (20 kDa, Protein from Homo sapiens)
human RNA polymerase II in complex with B1 RNA
Kassube SA, Fang J, Grob P, Yakovchuk P, Goodrich JA, Nogales E
J Mol Biol (2013) 425 pp. 3639-3648 [ DOI: doi:10.1016/j.jmb.2012.08.024 Pubmed: 22954660 ]
- Rpb12 (10 kDa, Protein from Homo sapiens)
- Rpb9 (10 kDa, Protein from Homo sapiens)
- Rpb5 (20 kDa, Protein from Homo sapiens)
- Rpb4 (20 kDa, Protein from Homo sapiens)
- Rpb7 (20 kDa, Protein from Homo sapiens)
- Rpb3 (30 kDa, Protein from Homo sapiens)
- Rpb2 (130 kDa, Protein from Homo sapiens)
- Rpb10 (10 kDa, Protein from Homo sapiens)
- B1 rna (45 kDa, RNA from Mus musculus)
- Rpb11 (10 kDa, Protein from Homo sapiens)
- Rpb6 (10 kDa, Protein from Homo sapiens)
- Rpb1 (220 kDa, Protein from Homo sapiens)
- Rpb8 (20 kDa, Protein from Homo sapiens)
- Human rna polymerase ii in complex with b1 rna (520 kDa, Sample)
Kassube SA, Fang J, Grob P, Yakovchuk P, Goodrich JA, Nogales E
J Mol Biol (2013) 425 pp. 3639-3648 [ DOI: doi:10.1016/j.jmb.2012.08.024 Pubmed: 22954660 ]
- Rpb12 (10 kDa, Protein from Homo sapiens)
- Rpb9 (10 kDa, Protein from Homo sapiens)
- Rpb5 (20 kDa, Protein from Homo sapiens)
- Rpb4 (20 kDa, Protein from Homo sapiens)
- Rpb7 (20 kDa, Protein from Homo sapiens)
- Rpb3 (30 kDa, Protein from Homo sapiens)
- Rpb2 (130 kDa, Protein from Homo sapiens)
- Rpb10 (10 kDa, Protein from Homo sapiens)
- Rpb11 (10 kDa, Protein from Homo sapiens)
- Human pol ii (520 kDa, Sample)
- Rpb6 (10 kDa, Protein from Homo sapiens)
- Rpb1 (220 kDa, Protein from Homo sapiens)
- Rpb8 (20 kDa, Protein from Homo sapiens)