Cryo-EM structure of the Clr6S (Clr6-HDAC) complex from S. pombe
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8ifg
Q-score: 0.441
Wang X, Wang Y, Liu S, Zhang Y, Xu K, Ji L, Kornberg RD, Zhang H
PNAS (2023) 120 pp. e2307598120- [ Pubmed: 37459529 DOI: doi:10.1073/pnas.2307598120 ]
- Cryo-em structure of the clr6-hdac (clr6s) complex from s. pombe (600 kDa, Complex from Schizosaccharomyces pombe)
- Histone deacetylase clr6 (45 kDa, Protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
- Water (18 Da, Ligand)
- Cph1 (45 kDa, Protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
- Paired amphipathic helix protein pst2 (125 kDa, Protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
- Chromatin modification-related protein eaf3 (39 kDa, Protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
- Rbap48-related wd40 repeat-containing protein prw1 (48 kDa, Protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
- Zinc ion (65 Da, Ligand)
- Cph2 (68 kDa, Protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
Cryo-EM structure of the SIN3S complex from S. pombe
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8i02
Q-score: 0.496
Wang C, Guo Z, Chu C, Lu Y, Zhang X, Zhan X
Cell Discov (2023) 9 pp. 42-42 [ DOI: doi:10.1038/s41421-023-00539-x Pubmed: 37076472 ]
- The sin3s complex (Complex from Schizosaccharomyces pombe)
- Cph1 (45 kDa, Protein from Schizosaccharomyces pombe)
- Chromatin modification-related protein eaf3 (39 kDa, Protein from Schizosaccharomyces pombe)
- Uncharacterized protein c2f7.07c (68 kDa, Protein from Schizosaccharomyces pombe)
- Paired amphipathic helix protein pst2 (125 kDa, Protein from Schizosaccharomyces pombe)
- Potassium ion (39 Da, Ligand)
- Histone deacetylase clr6 (46 kDa, Protein from Schizosaccharomyces pombe)
- Rbap48-related wd40 repeat-containing protein prw1 (48 kDa, Protein from Schizosaccharomyces pombe)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of the SIN3L complex from S. pombe
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8i03
Q-score: 0.444
Wang C, Guo Z, Chu C, Lu Y, Zhang X, Zhan X
Cell Discov (2023) 9 pp. 42-42 [ DOI: doi:10.1038/s41421-023-00539-x Pubmed: 37076472 ]
- Transcriptional regulatory protein rxt3 (39 kDa, Protein from Schizosaccharomyces pombe)
- The sin3s complex (Complex from Schizosaccharomyces pombe)
- Transcriptional regulatory protein rxt2 (27 kDa, Protein from Schizosaccharomyces pombe)
- Transcriptional regulatory protein dep1 (55 kDa, Protein from Schizosaccharomyces pombe)
- Potassium ion (39 Da, Ligand)
- Histone deacetylase clr6 (46 kDa, Protein from Schizosaccharomyces pombe)
- Transcriptional regulatory protein sds3 (30 kDa, Protein from Schizosaccharomyces pombe)
- Chromatin modification-related protein png2 (34 kDa, Protein from Schizosaccharomyces pombe)
- Rbap48-related wd40 repeat-containing protein prw1 (48 kDa, Protein from Schizosaccharomyces pombe)
- Zinc ion (65 Da, Ligand)
- Paired amphipathic helix protein pst1 (171 kDa, Protein from Schizosaccharomyces pombe)
- Paired amphipathic helix protein pst3 (133 kDa, Protein from Schizosaccharomyces pombe)