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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

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offer vital services to scientists in the member states

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scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"Ribosomal protein L27" AND author_name:"Wilson DN" AND software_ft:"FREALIGN"

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EMD-3730

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Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosome

Release date: July 26, 2017
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 5o2r
Q-score: 0.476

Florin T, Maracci C, Graf M, Karki P, Klepacki D, Berninghausen O, Beckmann R, Vazquez-Laslop N, Wilson DN, Rodnina MV, Mankin AS

Nat Struct Mol Biol (2017) 24 pp. 752-757 [ Pubmed: 28741611 DOI: doi:10.1038/nsmb.3439 ]

Sample:

50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli (strain K12))
Escherichia coli 70s ribosome (Complex)
50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli (strain K12))
Peptide chain release factor rf1 (26 kDa, Protein from Escherichia coli (strain K12))
Escherichia coli 70s ribosome (Complex from Escherichia coli (strain K12))
Apidaecin (Complex from Apis mellifera)
50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l15 (14 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli (strain K12))
Apidaecin (1 kDa, Protein from Apis mellifera)
50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s21 (7 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli (strain K12))
P-site ile-trna (24 kDa, RNA from Escherichia coli K-12)
30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli (strain K12))
Mrna (Complex from Staphylococcus aureus)
50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli (strain K12))
16s ribosomal rna (498 kDa, RNA from Escherichia coli K-12)
50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l33 (5 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s2 (24 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli (strain K12))
Mrna (2 kDa, RNA from Staphylococcus aureus)
50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s6 (11 kDa, Protein from Escherichia coli (strain K12))
5s ribosomal rna (38 kDa, RNA from Escherichia coli K-12)
50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l10 (14 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli (strain K12))
23s ribosomal rna (941 kDa, RNA from Escherichia coli K-12)
30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli (strain K12))
50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli (strain K12))
30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli (strain K12))

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EMD-3656

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Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.

Release date: June 14, 2017
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 5njt
Q-score: 0.381

Beckert B, Abdelshahid M, Schafer H, Steinchen W, Arenz S, Berninghausen O, Beckmann R, Bange G, Turgay K, Wilson DN

EMBO J (2017) 36 pp. 2061-2072 [ Pubmed: 28468753 DOI: doi:10.15252/embj.201696189 ]

Sample:

50s ribosomal protein l27 (8 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l19 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s4 (22 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s8 (14 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l15 (15 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l28 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l31 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s6 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
Structure of the bacillus subtilis hibernating 100s ribosome reveals the basis for 70s dimerization (Complex from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s16 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l5 (20 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
16s ribosomal rna (500 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l29 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s18 (8 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l33 1 (5 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s17 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l13 (16 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l6 (19 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s11 (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s3 (23 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l4 (22 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s15 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l10 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
Ribosome hibernation promotion factor (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l14 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
5s ribosomal rna (36 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l32 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l17 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l16 (15 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l24 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l36 (4 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s7 (17 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s14 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l20 (13 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l30 (6 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
23s ribosomal rna (947 kDa, RNA from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s5 (17 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s12 (15 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l35 (7 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s13 (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l18 (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s2 (25 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l22 (12 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s9 (14 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l34 (5 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s19 (9 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l23 (10 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s10 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l21 (11 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
30s ribosomal protein s20 (9 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l2 (30 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)
50s ribosomal protein l3 (22 kDa, Protein from Bacillus subtilis subsp. subtilis str. 168)

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EMD-3525

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Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions

Release date: Dec. 28, 2016
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 5mlc
Q-score: 0.39

Graf M, Arenz S, Huter P, Donhofer A, Novacek J, Wilson DN

Nucleic Acids Res (2017) 45 pp. 2887-2896 [ Pubmed: 27986857 DOI: doi:10.1093/nar/gkw1272 ]

Sample:

4.8s ribosomal rna, chloroplastic (33 kDa, RNA from Spinacia oleracea)
23s ribosomal rna, chloroplastic (911 kDa, RNA from Spinacia oleracea)
5s ribosomal rna, chloroplastic (39 kDa, RNA from Spinacia oleracea)
50s ribosomal protein l32, chloroplastic (6 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l34, chloroplastic (16 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l2, chloroplastic (29 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l5, chloroplastic (24 kDa, Protein from Spinacia oleracea)
Ribosome-recycling factor, chloroplastic (30 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l27, chloroplastic (21 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l22, chloroplastic (23 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l35, chloroplastic (17 kDa, Protein from Spinacia oleracea)
50s subunit of the spinach chloroplast ribosome (Complex from Spinacia oleracea)
50s ribosomal protein l17, chloroplastic (14 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l16, chloroplastic (15 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l15, chloroplastic (29 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l36, chloroplastic (4 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l18, chloroplastic (18 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l14, chloroplastic (13 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l29, chloroplastic (19 kDa, Protein from Spinacia oleracea)
Psrp6, chloroplastic (12 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l24, chloroplastic (21 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l20, chloroplastic (15 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l4, chloroplastic (32 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l21, chloroplastic (28 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l9, chloroplastic (22 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l28, chloroplastic (16 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l33, chloroplastic (7 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l6, chloroplastic (24 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l3, chloroplastic (33 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l19, chloroplastic (26 kDa, Protein from Spinacia oleracea)
Psrp5alpha, chloroplastic (15 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l23, chloroplastic (21 kDa, Protein from Spinacia oleracea)
50s ribosomal protein l13, chloroplastic (28 kDa, Protein from Spinacia oleracea)

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EMD-3508

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Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs

Release date: Dec. 14, 2016
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 5mgp
Q-score: 0.531

Huter P, Muller C, Beckert B, Arenz S, Berninghausen O, Beckmann R, Wilson DN

Nature (2017) 541 pp. 546-549 [ DOI: doi:10.1038/nature20821 Pubmed: 27906161 ]

Sample:

50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
Peptide chain release factor 2 (40 kDa, Protein from Escherichia coli)
50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli)
50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli)
50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli)
30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli)
30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli)
50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
30s ribosomal protein s2 (24 kDa, Protein from Escherichia coli)
50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
P-site trna (24 kDa, RNA from Escherichia coli)
16s ribosomal rna (498 kDa, RNA from Escherichia coli)
Mrna, trna, peptide chain release factor 2 (Complex from Escherichia coli)
30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli)
Mrna (1 kDa, RNA from Escherichia coli)
23s ribosomal rna (941 kDa, RNA from Escherichia coli)
30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
5s ribosomal rna (38 kDa, RNA from Escherichia coli)
30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli)
50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli)
30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli)
30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli)
30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli)
30s ribosomal protein s21 (7 kDa, Protein from Escherichia coli)
30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
Structural basis for arfa-rf2 mediated translation termination 1 on stop-codon lacking mrnas (2 MDa, Complex from Escherichia coli)
50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
Ribosome (Complex from Escherichia coli)
50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
50s ribosomal protein l33 (5 kDa, Protein from Escherichia coli)
50s ribosomal protein l15 (14 kDa, Protein from Escherichia coli)
30s ribosomal protein s6 (11 kDa, Protein from Escherichia coli)
30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
Alternative ribosome-rescue factor a (5 kDa, Protein from Escherichia coli)
30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)

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Sort by: Download

Showing 1 - 4 of 4. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [4]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

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Field: