EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Edit your search query here and hit Return to execute it:

sample_name:"Ribosomal protein L27" AND resolution:[4 TO 5} AND author_name:"Ag"

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

EMD-16228

Download Map 3D View

Giardia Ribosome in PRE-T Hybrid State (D1)

Release date: March 22, 2023
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 8btd
Q-score: 0.366

Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S

Nucleic Acids Res (2023) 51 pp. 3436-3451 [ Pubmed: 36912103 DOI: doi:10.1093/nar/gkad176 ]

Sample:

Ribosomal protein s26 (12 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s19e (15 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s8 (19 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s20 (14 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l18 (20 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s3a (28 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l23a (16 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l13 (26 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s2 (26 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l39 (6 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l30 (11 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s24 (14 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l19 (23 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l26 (15 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s17 (15 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l7a (25 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l34 (13 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s16 (17 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l37 (10 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein sa (28 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s21 (9 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l44 (12 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s5 (21 kDa, Protein from Giardia lamblia ATCC 50803)
Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l27a (17 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l10a (24 kDa, Protein from Giardia lamblia ATCC 50803)
Mrna (3 kDa, RNA from Giardia lamblia ATCC 50803)
Ribosomal protein l38e (8 kDa, Protein from Giardia lamblia ATCC 50803)
Trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
Ribosomal protein l13a (22 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l5 (33 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s27 (9 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l29 (14 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l14 (14 kDa, Protein from Giardia lamblia ATCC 50803)
Giardia ribosome in pre-t hybrid state (d1) (Complex from Giardia lamblia ATCC 50803)
Large subunit rrna (874 kDa, RNA from Giardia lamblia ATCC 50803)
Ribosomal protein s4 (30 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s14 (15 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s30 (7 kDa, Protein from Giardia lamblia ATCC 50803)
Trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
Ribosomal protein l4 (35 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l15 (24 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s11 (18 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l21 (18 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s28 (7 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l17 (18 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s7 (21 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l37a (10 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s23 (16 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l18a (20 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l29 (7 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l23 (15 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l7 (27 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s13 (17 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l6 (20 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l24 (22 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l32 (15 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s9 (21 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l22e (14 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s18 (17 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l10 (24 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s15 (16 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s15a (14 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l11 (19 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l35a (13 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l41 (3 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l36-1 (10 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l3 (42 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s25 (10 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s29a (6 kDa, Protein from Giardia lamblia ATCC 50803)
Small subunit rrna (471 kDa, RNA from Giardia lamblia ATCC 50803)
Ribosomal protein l31b (12 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s6 (28 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s10b (15 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein s3 (24 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l2 (27 kDa, Protein from Giardia lamblia ATCC 50803)
Ribosomal protein l27 (15 kDa, Protein from Giardia lamblia ATCC 50803)
5s rrna (38 kDa, RNA from Giardia lamblia ATCC 50803)
5.8s rrna (45 kDa, RNA from Giardia lamblia ATCC 50803)

[Show more]

EMD-8368

Download Map 3D View

Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex

Release date: Feb. 8, 2017
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 5t6r
Q-score: 0.325

Malyutin AG, Musalgaonkar S, Patchett S, Frank J, Johnson AW

EMBO J (2017) 36 pp. 854-868 [ DOI: doi:10.15252/embj.201696012 Pubmed: 28179369 ]

Sample:

60s in complex with nmd3 (Complex from Saccharomyces cerevisiae)
60s ribosomal protein l10 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l36-a (11 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l28 (16 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l24-a (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l20-a (20 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l19-a (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l3 (43 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l42-a (12 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l6-a (20 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l26-a (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l16-a (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l29 (6 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l33-a (12 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Maltose binding protein, 60s ribosomal export protein nmd3 fusion (103 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l4-a (39 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l39 (6 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l7-a (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l9-a (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l2-a (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l18-a (20 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Potassium ion (39 Da, Ligand)
60s ribosomal protein l30 (11 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l15-a (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l14-a (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l32 (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l25 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
25s ribosomal rna (1 MDa, RNA from Saccharomyces cerevisiae)
60s ribosomal protein l38 (8 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Water (18 Da, Ligand)
60s ribosomal protein l43-a (10 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l37-a (9 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l22-a (13 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l35-a (13 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l13-a (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Magnesium ion (24 Da, Ligand)
60s ribosomal protein l11-a (19 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ribosomal protein ul1 (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l8-a (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
5s ribosomal rna (38 kDa, RNA from Saccharomyces cerevisiae)
5.8s ribosomal rna (50 kDa, RNA from Saccharomyces cerevisiae)
60s ribosomal protein l17-a (20 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l34-a (13 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l27-a (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l21-a (18 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l23-a (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l5 (33 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l31-a (12 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: