Giardia Ribosome in PRE-T Classical State (C)
Resolution: 6.49 Å
EM Method: Single-particle
Fitted PDBs: 8bsj
Q-score: 0.411
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ DOI: doi:10.1093/nar/gkad176 Pubmed: 36912103 ]
- Ribosomal protein l11 (19 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l7a (25 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s29a (6 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10a (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s11 (18 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l4 (35 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l7 (27 kDa, Protein from Giardia intestinalis)
- 5.8s rrna (45 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l26 (15 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l27 (15 kDa, Protein from Giardia intestinalis)
- Mrna (3 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l13 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l30 (11 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l18a (20 kDa, Protein from Giardia intestinalis)
- Large subunit rrna (874 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l21 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l35a (13 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l15 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia intestinalis)
- Ssu ribosomal protein s12p (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s19e (15 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis)
- Trna (23 kDa, RNA from Giardia intestinalis)
- 40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l44 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l27a (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l29 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23a (16 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l18 (20 kDa, Protein from Giardia intestinalis)
- Ribosomal l22e (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s15a (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l5 (33 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l14 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s5 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37a (10 kDa, Protein from Giardia intestinalis)
- Trna (24 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l2 (27 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l32 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10 (24 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l41 (3 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l34 (13 kDa, Protein from Giardia intestinalis)
- 5s rrna (38 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal l38e (8 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l17 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s7 (21 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l29 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s27 (9 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l3 (42 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l31b (12 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l39 (6 kDa, Protein from Giardia intestinalis)
- Small subunit rrna (471 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l24 (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l13a (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l6 (20 kDa, Protein from Giardia intestinalis)
- Giardia ribosome in pre-t classical state (c) (Complex from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l19 (23 kDa, Protein from Giardia intestinalis)
Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8bsi
Q-score: 0.521
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ DOI: doi:10.1093/nar/gkad176 Pubmed: 36912103 ]
- Ribosomal protein l11 (19 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l7a (25 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s29a (6 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10a (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s11 (18 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l4 (35 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l7 (27 kDa, Protein from Giardia intestinalis)
- 5.8s rrna (45 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l26 (15 kDa, Protein from Giardia intestinalis)
- Elongation factor 2 (99 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l27 (15 kDa, Protein from Giardia intestinalis)
- Mrna (3 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l13 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l30 (11 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l18a (20 kDa, Protein from Giardia intestinalis)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Large subunit rrna (874 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l21 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l35a (13 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l15 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s19e (15 kDa, Protein from Giardia intestinalis)
- E-site trna (24 kDa, RNA from Giardia intestinalis)
- 40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l44 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l27a (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l29 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23a (16 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l18 (20 kDa, Protein from Giardia intestinalis)
- Ribosomal l22e (14 kDa, Protein from Giardia intestinalis)
- Phosphate ion (94 Da, Ligand)
- Ribosomal protein s15a (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l5 (33 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l14 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s5 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37a (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l2 (27 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l32 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10 (24 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l41 (3 kDa, Protein from Giardia intestinalis)
- Giardia ribosome chimeric hybrid-like gdp+pi bound state (b1) (Complex from Giardia intestinalis)
- Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l34 (13 kDa, Protein from Giardia intestinalis)
- 5s rrna (38 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal l38e (8 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l17 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s7 (21 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l29 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s27 (9 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l3 (42 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l31b (12 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l39 (6 kDa, Protein from Giardia intestinalis)
- Small subunit rrna (471 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s23 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l24 (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l13a (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l6 (20 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l19 (23 kDa, Protein from Giardia intestinalis)