Giardia Ribosome in PRE-T Classical State (C)
Resolution: 6.49 Å
EM Method: Single-particle
Fitted PDBs: 8bsj
Q-score: 0.411
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ DOI: doi:10.1093/nar/gkad176 Pubmed: 36912103 ]
- Ribosomal protein l11 (19 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l7a (25 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s29a (6 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10a (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s11 (18 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l4 (35 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l7 (27 kDa, Protein from Giardia intestinalis)
- 5.8s rrna (45 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l26 (15 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l27 (15 kDa, Protein from Giardia intestinalis)
- Mrna (3 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l13 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l30 (11 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l18a (20 kDa, Protein from Giardia intestinalis)
- Large subunit rrna (874 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l21 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l35a (13 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l15 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia intestinalis)
- Ssu ribosomal protein s12p (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s19e (15 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis)
- Trna (23 kDa, RNA from Giardia intestinalis)
- 40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l44 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l27a (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l29 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23a (16 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l18 (20 kDa, Protein from Giardia intestinalis)
- Ribosomal l22e (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s15a (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l5 (33 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l14 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s5 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37a (10 kDa, Protein from Giardia intestinalis)
- Trna (24 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l2 (27 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l32 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10 (24 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l41 (3 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l34 (13 kDa, Protein from Giardia intestinalis)
- 5s rrna (38 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal l38e (8 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l17 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s7 (21 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l29 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s27 (9 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l3 (42 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l31b (12 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l39 (6 kDa, Protein from Giardia intestinalis)
- Small subunit rrna (471 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l24 (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l13a (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l6 (20 kDa, Protein from Giardia intestinalis)
- Giardia ribosome in pre-t classical state (c) (Complex from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l19 (23 kDa, Protein from Giardia intestinalis)
Giardia Ribosome in PRE-T Hybrid State (D1)
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 8btd
Q-score: 0.366
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ DOI: doi:10.1093/nar/gkad176 Pubmed: 36912103 ]
- Ribosomal protein l24 (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15a (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s10b (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10a (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s11 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l15 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l4 (35 kDa, Protein from Giardia lamblia ATCC 50803)
- Large subunit rrna (874 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s23 (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s28 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s2 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s8 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l34 (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s20 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l31b (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l38e (8 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l7a (25 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s9 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s16 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s17 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37a (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l44 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s29a (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s27 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s14 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s24 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s6 (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l3 (42 kDa, Protein from Giardia lamblia ATCC 50803)
- Small subunit rrna (471 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l13 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l26 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s7 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15 (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l35a (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l5 (33 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s13 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Giardia ribosome in pre-t hybrid state (d1) (Complex from Giardia lamblia ATCC 50803)
- 5s rrna (38 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s5 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Mrna (3 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l32 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l6 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23a (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l7 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein sa (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l39 (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s25 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s26 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l2 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s18 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s30 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l11 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3a (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l41 (3 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s21 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18a (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l17 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l13a (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l19 (23 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l22e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l14 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s19e (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27a (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l30 (11 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l21 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s4 (30 kDa, Protein from Giardia lamblia ATCC 50803)
- 5.8s rrna (45 kDa, RNA from Giardia lamblia ATCC 50803)
Giardia ribosome in POST-T state (A1)
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 8br8
Q-score: 0.513
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ DOI: doi:10.1093/nar/gkad176 Pubmed: 36912103 ]
- 60s ribosomal protein l29 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l24 (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15a (14 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s25 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s10b (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s6 (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10a (24 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein sa (28 kDa, Protein from Giardia lamblia ATCC 50803)
- 60s ribosomal protein l13 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s11 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l15 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l4 (35 kDa, Protein from Giardia lamblia ATCC 50803)
- Large subunit rrna (874 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s28 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s2 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- E-site trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
- 60s ribosomal protein l18a (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- 60s ribosomal protein l7a (25 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s13 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l34 (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s20 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l31b (12 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s26 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s9 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s16 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s17 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37a (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal l38e (8 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l44 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s29a (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s27 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- 60s ribosomal protein l27 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s23 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s24 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s3a (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l3 (42 kDa, Protein from Giardia lamblia ATCC 50803)
- Small subunit rrna (471 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l26 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15 (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l35a (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l5 (33 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s14 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- 5s rrna (38 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s5 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l32 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l6 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s4 (30 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s7 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23a (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l7 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s30 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l39 (6 kDa, Protein from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s21 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l2 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Giardia ribosome in post-t state (a1) (Complex from Giardia lamblia ATCC 50803)
- 40s ribosomal protein s8 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s18 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- 60s ribosomal protein l41 (3 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l11 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal l22e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l17 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l13a (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l19 (23 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l14 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s19e (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27a (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l30 (11 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l21 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- 5.8s rrna (45 kDa, RNA from Giardia lamblia ATCC 50803)
Giardia ribosome in POST-T state, no E-site tRNA (A6)
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 8brm
Q-score: 0.462
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ DOI: doi:10.1093/nar/gkad176 Pubmed: 36912103 ]
- Ribosomal protein l13 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l26 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l38e (8 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s7 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l7a (25 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l11 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15 (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s30 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l35a (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l5 (33 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l24 (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3a (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s9 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s26 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15a (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l41 (3 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s10b (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s16 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s17 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18a (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s21 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10a (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37a (10 kDa, Protein from Giardia lamblia ATCC 50803)
- 5.8s rrna (46 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l17 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s14 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l44 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s29a (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l13a (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s27 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- 5s rrna (38 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l19 (23 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s11 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l15 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l4 (35 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s5 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Large subunit rrna (874 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l32 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l6 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s23 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s24 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l22e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s28 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s2 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l14 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s6 (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23a (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s19e (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27a (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l30 (11 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l7 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l21 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s8 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein sa (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l39 (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s4 (30 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s13 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s25 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l34 (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l3 (42 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s20 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l2 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Small subunit rrna (471 kDa, RNA from Giardia lamblia ATCC 50803)
- Giardia ribosome in post-t state, no e-site trna (a6) (Complex from Giardia lamblia ATCC 50803)
- Ribosomal protein l31b (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s18 (17 kDa, Protein from Giardia lamblia ATCC 50803)
Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8bsi
Q-score: 0.521
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ DOI: doi:10.1093/nar/gkad176 Pubmed: 36912103 ]
- Ribosomal protein l11 (19 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l7a (25 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s18 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s16 (17 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s4 (30 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s30 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s29a (6 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10a (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s2 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s11 (18 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l4 (35 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s9 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l7 (27 kDa, Protein from Giardia intestinalis)
- 5.8s rrna (45 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l26 (15 kDa, Protein from Giardia intestinalis)
- Elongation factor 2 (99 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l27 (15 kDa, Protein from Giardia intestinalis)
- Mrna (3 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s24 (14 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l13 (26 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l30 (11 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l18a (20 kDa, Protein from Giardia intestinalis)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Large subunit rrna (874 kDa, RNA from Giardia intestinalis)
- Ribosomal protein l21 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s6 (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l35a (13 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l15 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s19e (15 kDa, Protein from Giardia intestinalis)
- E-site trna (24 kDa, RNA from Giardia intestinalis)
- 40s ribosomal protein s21 (9 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s3a (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l44 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l27a (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l29 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s10b (15 kDa, Protein from Giardia intestinalis)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23a (16 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s20 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l18 (20 kDa, Protein from Giardia intestinalis)
- Ribosomal l22e (14 kDa, Protein from Giardia intestinalis)
- Phosphate ion (94 Da, Ligand)
- Ribosomal protein s15a (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s13 (17 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l5 (33 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l14 (14 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s15 (16 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein sa (28 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s5 (21 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l37a (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l2 (27 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l32 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l10 (24 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l41 (3 kDa, Protein from Giardia intestinalis)
- Giardia ribosome chimeric hybrid-like gdp+pi bound state (b1) (Complex from Giardia intestinalis)
- Ribosomal protein s14 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l34 (13 kDa, Protein from Giardia intestinalis)
- 5s rrna (38 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s28 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal l38e (8 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l17 (18 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s7 (21 kDa, Protein from Giardia intestinalis)
- 60s ribosomal protein l29 (7 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s27 (9 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l23 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s3 (24 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l3 (42 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s26 (12 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l31b (12 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s25 (10 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l39 (6 kDa, Protein from Giardia intestinalis)
- Small subunit rrna (471 kDa, RNA from Giardia intestinalis)
- Ribosomal protein s23 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l24 (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l13a (22 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l6 (20 kDa, Protein from Giardia intestinalis)
- 40s ribosomal protein s8 (19 kDa, Protein from Giardia intestinalis)
- Ribosomal protein s17 (15 kDa, Protein from Giardia intestinalis)
- Ribosomal protein l19 (23 kDa, Protein from Giardia intestinalis)
Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 7abz
Q-score: 0.359
Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R
Nat Commun (2021) 12 pp. 4909-4909 [ DOI: doi:10.1038/s41467-021-24881-4 Pubmed: 34389707 ]
- Ribosome (Complex from Escherichia coli (strain K12))
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l10 (13 kDa, Protein from Escherichia coli K-12)
- Zinc ion (65 Da, Ligand)
- 16s ribosomal rna (499 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli K-12)
- Trna-phe (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l33 (5 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli K-12)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- Transfer-messenger rna (tmrna) (Complex from Escherichia coli (strain K12))
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- Mrna (4 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
- Ssra-binding protein (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- Trna-phe and mrna (Complex from Escherichia coli (strain K12))
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
- Ssra-binding protein and elongation factor tu 2 (Complex from Escherichia coli (strain K12))
- Elongation factor tu 2 (43 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s2 (24 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s18 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- Transfer-messenger rna (tmrna) (117 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli K-12)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- Structure of pre-accomodated trans-translation complex on e. coli stalled ribosome. (Complex)
- 30s ribosomal protein s21 (6 kDa, Protein from Escherichia coli K-12)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- Kirromycin (796 Da, Ligand)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli K-12)
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 7ac7
Q-score: 0.478
Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R
Nat Commun (2021) 12 pp. 4909-4909 [ DOI: doi:10.1038/s41467-021-24881-4 Pubmed: 34389707 ]
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l13 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli K-12)
- Trna-phe (24 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- Mrna (4 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l10 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- Ribosome (Complex from Escherichia coli K-12)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 16s ribosomal rna (499 kDa, RNA from Escherichia coli K-12)
- Transfer-messenger rna (tmrna) (117 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- Ssra-binding protein (Complex from Escherichia coli K-12)
- 30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s2 (25 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- Tmrna (Complex from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli K-12)
- Magnesium ion (24 Da, Ligand)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli K-12)
- Structure of accomodated trans-translation complex on e. coli stalled ribosome. (Complex)
- 50s ribosomal protein l29 (6 kDa, Protein from Escherichia coli K-12)
- Ssra-binding protein (16 kDa, Protein from Escherichia coli K-12)
- Nascent peptide (236 Da, Protein from Escherichia coli K-12)
- Trna, mrna (Complex from Escherichia coli)
- 30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7acj
Q-score: 0.422
Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R
Nat Commun (2021) 12 pp. 4909-4909 [ DOI: doi:10.1038/s41467-021-24881-4 Pubmed: 34389707 ]
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- Smpb (Complex from Escherichia coli K-12)
- 50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- Zinc ion (65 Da, Ligand)
- Ribosome (Complex from Escherichia coli K-12)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli K-12)
- Ribosomal rna and nascent peptide (Complex from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 16s ribosomal rna (497 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- Structure of translocated trans-translation complex on e. coli stalled ribosome. (Complex)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- Ssra-binding protein (17 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s2 (25 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- Transfer-messanger rna (tmrna) (117 kDa, RNA from Escherichia coli BL21(DE3))
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- Rna (Complex from Escherichia coli BL21(DE3))
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- Magnesium ion (24 Da, Ligand)
- Nascent peptide (236 Da, Protein from Escherichia coli K-12)
- 30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
Structure of post-translocated trans-translation complex on E. coli stalled ribosome.
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 7acr
Q-score: 0.38
Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R
Nat Commun (2021) 12 pp. 4909-4909 [ DOI: doi:10.1038/s41467-021-24881-4 Pubmed: 34389707 ]
- Ribosome (Complex from Escherichia coli (strain K12))
- 16s ribosomal rna (497 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s3 (23 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l28 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l23 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- Transfer-messenger rna (tmrna) (117 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l27 (8 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s7 (16 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s11 (12 kDa, Protein from Escherichia coli K-12)
- Ssra-binding protein (17 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s2 (25 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- Tmrna (Complex from Escherichia coli)
- Ssra-binding protein (Complex from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- Structure of post-translocated trans-translation complex on e. coli stalled ribosome. (Complex)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- 5s ribosomal rna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- 23s ribosomal rna (941 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- Magnesium ion (24 Da, Ligand)
- Nascent peptide (236 Da, Protein from Escherichia coli K-12)
- 30s ribosomal protein s5 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s18 (7 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)