Anton L, Cheng W, Haile M, Cobb DW, Zhu X, Han L, Li E, Nair A, Lee CL, Ho CM
To Be Published
- 60s ribosomal protein l30e, putative (11 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l7, putative (30 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s9, putative (22 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l22, putative (16 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s25 (11 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s7 (22 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l14, putative (19 kDa, Protein from Plasmodium falciparum 3D7)
- Plasmodium falciparum 80s ribosome consensus structure (Complex from Plasmodium falciparum 3D7)
- 60s ribosomal protein l38 (10 kDa, Protein from Plasmodium falciparum 3D7)
- 28s ribosomal rna (1 MDa, RNA from Plasmodium falciparum 3D7)
- 40s ribosomal protein s5, putative (21 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l6, putative (21 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s19 (16 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l32 (15 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l4 (46 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l19 (21 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s19 (19 kDa, Protein from Plasmodium falciparum 3D7)
- 18s ribosomal rna (669 kDa, RNA from Plasmodium falciparum 3D7)
- 60s ribosomal protein l13 (25 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s11, putative (18 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s17, putative (16 kDa, Protein from Plasmodium falciparum 3D7)
- Small ribosomal subunit protein es30 (4 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s3a (30 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l21 (18 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l26, putative (14 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l3 (44 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l39 (6 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s5 (30 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s20e, putative (13 kDa, Protein from Plasmodium falciparum 3D7)
- Large ribosomal subunit protein el42 (12 kDa, Protein from Plasmodium falciparum 3D7)
- 5.8s ribosomal rna (51 kDa, RNA from Plasmodium falciparum 3D7)
- 40s ribosomal protein sa (29 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l27 (16 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l41 (6 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l29 (8 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l6, putative (25 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l41 (5 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s29, putative (6 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l7a (32 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l5, putative (34 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l10, putative (25 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s11 (16 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s24 (15 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s15 (17 kDa, Protein from Plasmodium falciparum 3D7)
- Ribosomal protein l15 (23 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s12 (15 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l2 (28 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l18a (21 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l11a, putative (20 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l34 (17 kDa, Protein from Plasmodium falciparum 3D7)
- Large ribosomal subunit protein el43 (10 kDa, Protein from Plasmodium falciparum 3D7)
- Ribosomal protein l37 (10 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s4 (29 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l35, putative (14 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s18, putative (17 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l27a, putative (16 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l13, putative (23 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l28 (14 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s23, putative (16 kDa, Protein from Plasmodium falciparum 3D7)
- Receptor for activated c kinase (35 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s26 (12 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s16 (16 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s8 (25 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l31 (14 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l24, putative (19 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s27 (9 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l24, putative (23 kDa, RNA from Plasmodium falciparum 3D7)
- 40s ribosomal protein s15a, putative (14 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l36 (12 kDa, Protein from Plasmodium falciparum 3D7)
- 5s ribosomal rna (38 kDa, RNA from Plasmodium falciparum 3D7)
- 40s ribosomal protein s6 (35 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l23 (22 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l35ae, putative (16 kDa, Protein from Plasmodium falciparum 3D7)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s21 (9 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l23, putative (15 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s10, putative (16 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l17, putative (19 kDa, Protein from Plasmodium falciparum 3D7)
- 40s ribosomal protein s3 (24 kDa, Protein from Plasmodium falciparum 3D7)
- 60s ribosomal protein l18-2, putative (21 kDa, Protein from Plasmodium falciparum 3D7)
Giardia Ribosome in PRE-T Hybrid State (D1)
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 8btd
Q-score: 0.366
Majumdar S, Emmerich A, Krakovka S, Mandava CS, Svard SG, Sanyal S
Nucleic Acids Res (2023) 51 pp. 3436-3451 [ DOI: doi:10.1093/nar/gkad176 Pubmed: 36912103 ]
- Ribosomal protein l24 (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15a (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s10b (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10a (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s11 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l15 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l4 (35 kDa, Protein from Giardia lamblia ATCC 50803)
- Large subunit rrna (874 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s23 (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s28 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s2 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s8 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l34 (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s20 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l31b (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l38e (8 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l7a (25 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s9 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s16 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s17 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l37a (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l44 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s29a (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s27 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s14 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s24 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s6 (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l3 (42 kDa, Protein from Giardia lamblia ATCC 50803)
- Small subunit rrna (471 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l13 (26 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l26 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s7 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s15 (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Trna (24 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l35a (13 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l5 (33 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s13 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l36-1 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Giardia ribosome in pre-t hybrid state (d1) (Complex from Giardia lamblia ATCC 50803)
- 5s rrna (38 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein s5 (21 kDa, Protein from Giardia lamblia ATCC 50803)
- Mrna (3 kDa, RNA from Giardia lamblia ATCC 50803)
- Ribosomal protein l32 (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l6 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l23a (16 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l7 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Ubiquitin/ribosomal protein l40e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein sa (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l39 (6 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s25 (10 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s26 (12 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l2 (27 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s18 (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s30 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l11 (19 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s3a (28 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l41 (3 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s21 (9 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18a (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l17 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l13a (22 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l19 (23 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l22e (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l29 (7 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l14 (14 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s19e (15 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l27a (17 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l10 (24 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l30 (11 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l21 (18 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein l18 (20 kDa, Protein from Giardia lamblia ATCC 50803)
- Ribosomal protein s4 (30 kDa, Protein from Giardia lamblia ATCC 50803)
- 5.8s rrna (45 kDa, RNA from Giardia lamblia ATCC 50803)
Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 7zrs
Q-score: 0.49
Best K, Ikeuchi K, Kater L, Best D, Musial J, Matsuo Y, Berninghausen O, Becker T, Inada T, Beckmann R
Nat Commun (2023) 14 pp. 921-921 [ DOI: doi:10.1038/s41467-023-36230-8 Pubmed: 36801861 ]
- 40s ribosomal protein s6-a (26 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l15-a (24 kDa, Protein from Saccharomyces cerevisiae)
- Rps15 isoform 1 (13 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l13-a (21 kDa, Protein from Saccharomyces cerevisiae)
- Rpl24a isoform 1 (14 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s4-a (29 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s24-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 5.8s ribosomal rna (50 kDa, RNA from Saccharomyces cerevisiae)
- 40s ribosomal protein s0-a (22 kDa, Protein from Saccharomyces cerevisiae)
- Rqc trigger complex subunit rqt4 (60 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s13 (16 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l29 (6 kDa, Protein from Saccharomyces cerevisiae)
- Rps2 isoform 1 (23 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s10-a (11 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s21-a (9 kDa, Protein from Saccharomyces cerevisiae)
- Rqt complex (slh1, cue3 and rqt4) (Complex from Saccharomyces cerevisiae)
- 60s ribosomal protein l9-a (21 kDa, Protein from Saccharomyces cerevisiae)
- Rpl5 isoform 1 (33 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l17-a (20 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s27-a (8 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l3 (43 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l37-a (9 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s8-a (22 kDa, Protein from Saccharomyces cerevisiae)
- Ribosome with bound rqt components (slh1, cue3 and rqt4) (Complex)
- 60s ribosomal protein l43-a (9 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l18-a (20 kDa, Protein from Saccharomyces cerevisiae)
- Rqc trigger complex helicase slh1 (225 kDa, Protein from Saccharomyces cerevisiae)
- Rpl38 isoform 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s12 (13 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l28 (16 kDa, Protein from Saccharomyces cerevisiae)
- Rpl32 isoform 1 (14 kDa, Protein from Saccharomyces cerevisiae)
- Rps3 isoform 1 (24 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l34-a (12 kDa, Protein from Saccharomyces cerevisiae)
- 25s ribosomal rna (1 MDa, RNA from Saccharomyces cerevisiae)
- 60s ribosomal protein l42-a (11 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l25 (13 kDa, Protein from Saccharomyces cerevisiae)
- Rps29a isoform 1 (6 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l27-a (15 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l2-a (27 kDa, Protein from Saccharomyces cerevisiae)
- Rps31 isoform 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l36-a (11 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l14-a (14 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s7-a (21 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l19-a (21 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s17-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s25 (9 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s9-a (21 kDa, Protein from Saccharomyces cerevisiae)
- Rps26b isoform 1 (11 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s19-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l40-a (6 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l6-b (20 kDa, Protein from Saccharomyces cerevisiae)
- Rps28a isoform 1 (7 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s11-a (16 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s23-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l31-a (12 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s18-a (16 kDa, Protein from Saccharomyces cerevisiae)
- Rqc trigger complex subunit cue3 (34 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l23-a (14 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l35-a (13 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l8-a (25 kDa, Protein from Saccharomyces cerevisiae)
- Rpl10 isoform 1 (25 kDa, Protein from Saccharomyces cerevisiae)
- Rpl41a isoform 1 (3 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l21-a (18 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s1-a (28 kDa, Protein from Saccharomyces cerevisiae)
- Rps5p (22 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l26-a (14 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l7-a (25 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s16-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 5s ribosomal rna (38 kDa, RNA from Saccharomyces cerevisiae)
- 60s ribosomal protein l20-a (20 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s14-b (13 kDa, Protein from Saccharomyces cerevisiae)
- Rpl4a isoform 1 (39 kDa, Protein from Saccharomyces cerevisiae)
- Rps22a isoform 1 (14 kDa, Protein from Saccharomyces cerevisiae)
- Rps20 isoform 1 (11 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s30-a (6 kDa, Protein from Saccharomyces cerevisiae)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Saccharomyces cerevisiae)
- Rpl11b isoform 1 (19 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l33-a (12 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l16-a (22 kDa, Protein from Saccharomyces cerevisiae)
- 18s ribosomal rna (579 kDa, RNA from Saccharomyces cerevisiae)
- 60s ribosomal protein l39 (6 kDa, Protein from Saccharomyces cerevisiae)
- Trna (24 kDa, RNA from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Ribosome (Complex from Saccharomyces cerevisiae)
- 60s ribosomal protein l30 (10 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l22-a (11 kDa, Protein from Saccharomyces cerevisiae)
Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7zuw
Q-score: 0.447
Best K, Ikeuchi K, Kater L, Best D, Musial J, Matsuo Y, Berninghausen O, Becker T, Inada T, Beckmann R
Nat Commun (2023) 14 pp. 921-921 [ DOI: doi:10.1038/s41467-023-36230-8 Pubmed: 36801861 ]
- 40s ribosomal protein s6-a (26 kDa, Protein from Saccharomyces cerevisiae)
- Rps15 isoform 1 (13 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l13-a (21 kDa, Protein from Saccharomyces cerevisiae)
- Rpl24a isoform 1 (14 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s4-a (29 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s24-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 5.8s ribosomal rna (50 kDa, RNA from Saccharomyces cerevisiae)
- 40s ribosomal protein s0-a (22 kDa, Protein from Saccharomyces cerevisiae)
- Rqc trigger complex subunit rqt4 (60 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s13 (16 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l29 (6 kDa, Protein from Saccharomyces cerevisiae)
- Cue3 isoform 1 (34 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s8-b (22 kDa, Protein from Saccharomyces cerevisiae)
- Rps2 isoform 1 (23 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s10-a (11 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s21-a (9 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s26 (11 kDa, Protein from Saccharomyces cerevisiae)
- Rpl5 isoform 1 (33 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l17-a (20 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s27-a (8 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l3 (43 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l37-a (9 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l43-a (9 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l18-a (20 kDa, Protein from Saccharomyces cerevisiae)
- Rqc trigger complex helicase slh1 (225 kDa, Protein from Saccharomyces cerevisiae)
- Rpl38 isoform 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s12 (13 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l28 (16 kDa, Protein from Saccharomyces cerevisiae)
- Rpl32 isoform 1 (14 kDa, Protein from Saccharomyces cerevisiae)
- Rps3 isoform 1 (24 kDa, Protein from Saccharomyces cerevisiae)
- Rpl9a isoform 1 (21 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l34-a (12 kDa, Protein from Saccharomyces cerevisiae)
- 25s ribosomal rna (1 MDa, RNA from Saccharomyces cerevisiae)
- 60s ribosomal protein l42-a (11 kDa, Protein from Saccharomyces cerevisiae)
- Rqc trigger complex bound to the stalled ribosome of a disome unit (Complex from Saccharomyces cerevisiae)
- 60s ribosomal protein l25 (13 kDa, Protein from Saccharomyces cerevisiae)
- Rps29a isoform 1 (6 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l27-a (15 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l2-a (27 kDa, Protein from Saccharomyces cerevisiae)
- Rps31 isoform 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l36-a (11 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l14-a (14 kDa, Protein from Saccharomyces cerevisiae)
- Trna (24 kDa, RNA from Saccharomyces cerevisiae)
- 40s ribosomal protein s7-a (21 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l19-a (21 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s17-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s25 (9 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l8 (25 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s9-a (21 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s19-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l40-a (6 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l6-b (20 kDa, Protein from Saccharomyces cerevisiae)
- Rps28a isoform 1 (7 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s11-a (16 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s23-a (15 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l31-a (12 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s18-a (16 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l23-a (14 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l35-a (13 kDa, Protein from Saccharomyces cerevisiae)
- Rpl10 isoform 1 (25 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l21-a (18 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s1-a (28 kDa, Protein from Saccharomyces cerevisiae)
- Rps5p (22 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l26-a (14 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l7-a (25 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s16-a (15 kDa, Protein from Saccharomyces cerevisiae)
- Ribosomal protein l15 (24 kDa, Protein from Saccharomyces cerevisiae)
- 18s ribosomal rna (579 kDa, RNA from Saccharomyces cerevisiae)
- 40s ribosomal protein s30-a (6 kDa, Protein from Saccharomyces cerevisiae)
- 5s ribosomal rna (38 kDa, RNA from Saccharomyces cerevisiae)
- 60s ribosomal protein l20-a (20 kDa, Protein from Saccharomyces cerevisiae)
- 40s ribosomal protein s14-b (13 kDa, Protein from Saccharomyces cerevisiae)
- Rpl4a isoform 1 (39 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l41 (3 kDa, Protein from Saccharomyces cerevisiae)
- Rps22a isoform 1 (14 kDa, Protein from Saccharomyces cerevisiae)
- Rps20 isoform 1 (11 kDa, Protein from Saccharomyces cerevisiae)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Saccharomyces cerevisiae)
- Rqc trigger complex with slh1, cue3, rqt4 (Complex from Saccharomyces cerevisiae)
- Rpl11b isoform 1 (19 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l33-a (12 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l16-a (22 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l39 (6 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Ribosome (Complex from Saccharomyces cerevisiae)
- 60s ribosomal protein l30 (10 kDa, Protein from Saccharomyces cerevisiae)
- 60s ribosomal protein l22-a (11 kDa, Protein from Saccharomyces cerevisiae)
Structure of the human 48S initiation complex in open state (h48S AUG open)
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 7qp6
Q-score: 0.233
Yi SH, Petrychenko V, Schliep JE, Goyal A, Linden A, Chari A, Urlaub H, Stark H, Rodnina MV, Adio S, Fischer N
Nucleic Acids Res (2022) 50 pp. 5282-5298 [ DOI: doi:10.1093/nar/gkac283 Pubmed: 35489072 ]
- Human 48s initiation complex 40s-eif1-eif1a-eif2-eif3-trna-met-mrna (Complex)
- 60s ribosomal protein l41 (3 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s13 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s16 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein sa (32 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s28 (7 kDa, Protein from Homo sapiens)
- Mrna (6 kDa, RNA from Homo sapiens)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 2 (38 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s20 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s2 (31 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s23 (15 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Eukaryotic translation initiation factor 3 subunit f (37 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s26 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s29 (6 kDa, Protein from Homo sapiens)
- Ubiquitin-40s ribosomal protein s27a (18 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit k (25 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s14 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s12 (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15 (17 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit l (66 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit g (35 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s5 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s19 (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s27 (9 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s7 (22 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit h (39 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit d (64 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 1 (36 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s24 (15 kDa, Protein from Homo sapiens)
- 18s rrna (603 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s30 (6 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3a (30 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s10 (18 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit a (166 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit e (52 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s25 (13 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s11 (18 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit c (105 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit b (92 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 1 (12 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s21 (9 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s15a (14 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s9 (22 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s18 (17 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s3 (26 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 1a, x-chromosomal (16 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s8 (24 kDa, Protein from Homo sapiens)
- 40s ribosomal protein s6 (28 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 2 subunit 3 (51 kDa, Protein from Homo sapiens)
- Initiator met-trna-i (24 kDa, RNA from Homo sapiens)
- 40s ribosomal protein s17 (15 kDa, Protein from Homo sapiens)
- Eukaryotic translation initiation factor 3 subunit m (42 kDa, Protein from Homo sapiens)
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7d4i
Q-score: 0.339
To Be Published
- 40s ribosomal protein s8-a (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosome biogenesis protein bms1 (135 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosomal rna small subunit methyltransferase nep1 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rna 3'-terminal phosphate cyclase-like protein (40 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 20 (287 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Essential nuclear protein 1 (54 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex component rrp40 (26 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Regulator of rdna transcription protein 14 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s14-a (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rrna 2'-o-methyltransferase fibrillarin (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Unassigned peptides 1 (52 kDa, Protein from Saccharomyces cerevisiae S288C)
- Exosome complex component rrp45 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex component csl4 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rrna biogenesis protein rrp5 (193 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s18-a (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s6-a (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 13 kda ribonucleoprotein-associated protein (13 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 9 (65 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Pno1 (36 kDa, Protein from Saccharomyces cerevisiae S288C)
- Exosome complex component rrp46 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Zinc ion (65 Da, Ligand)
- U3 snorna (106 kDa, RNA from Saccharomyces cerevisiae S288C)
- Nucleolar protein 56 (56 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 21 (104 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Something about silencing protein 10 (70 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 6 (52 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s23-a (16 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 4 (87 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 7 (62 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 5' ets (225 kDa, RNA from Saccharomyces cerevisiae S288C)
- U3 small nucleolar rna-associated protein 14 (103 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s27-a (8 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 10 (200 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rrna-processing protein fcf1 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s19-a (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Nucleolar complex protein 4 (63 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 18 (66 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar ribonucleoprotein protein imp4 (33 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex component rrp42 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s1-a (28 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 8 (80 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex component rrp4 (39 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 18s rrna (583 kDa, RNA from Saccharomyces cerevisiae S288C)
- Exosome complex component mtr3 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex component rrp43 (44 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Net1-associated nuclear protein 1 (101 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 15 (57 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Periodic tryptophan protein 2 (101 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 40s ribosomal protein s24-a (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex component ski6 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- M-phase phosphoprotein 6 homolog (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Unassigned peptides 2 (59 kDa, Protein from Saccharomyces cerevisiae S288C)
- 40s ribosomal protein s7-a (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s22-b (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Bud site selection protein 21 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 90s pre-ribosome (state f) (5 MDa, Complex from Saccharomyces cerevisiae S288C)
- U3 small nucleolar rna-associated protein 13 (91 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s5 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Adenosine-5'-diphosphate (427 Da, Ligand)
- 40s ribosomal protein s11-a (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s9-a (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Nucleolar protein 58 (57 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s28-a (7 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex exonuclease rrp6 (84 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s4-a (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s13 (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s16-a (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rrna-processing protein fcf2 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosomal rna-processing protein 7 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein mpp10 (67 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 5 (72 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Atp-dependent rna helicase dob1 (122 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 12 (106 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Probable atp-dependent rna helicase dhr1 (145 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Nucleolar complex protein 14 (94 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar ribonucleoprotein protein imp3 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Protein sof1 (56 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex exonuclease dis3 (113 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Exosome complex protein lrp1 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosomal rna-processing protein 9 (65 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 22 (140 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Magnesium ion (24 Da, Ligand)
- U3 small nucleolar rna-associated protein 11 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2)
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 7d5s
Q-score: 0.181
To Be Published
- 40s ribosomal protein s13 (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s16-a (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rrna-processing protein fcf2 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosome biogenesis protein utp30 (31 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 13 kda ribonucleoprotein-associated protein (13 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Net1-associated nuclear protein 1 (101 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 9 (65 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 15 (57 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosomal rna-processing protein 7 (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosomal rna small subunit methyltransferase nep1 (27 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosome biogenesis protein bms1 (135 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Guanosine-5'-triphosphate (523 Da, Ligand)
- U3 small nucleolar rna-associated protein mpp10 (67 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rna 3'-terminal phosphate cyclase-like protein (40 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 5 (72 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Zinc ion (65 Da, Ligand)
- Nucleolar protein 56 (56 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 12 (106 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 21 (104 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Nucleolar complex protein 14 (94 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Periodic tryptophan protein 2 (104 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Something about silencing protein 10 (70 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rrna-processing protein fcf1 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 6 (52 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Bud site selection protein 21 (24 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s23-a (16 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 4 (87 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 7 (62 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Essential nuclear protein 1 (55 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 5' ets (225 kDa, RNA from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar ribonucleoprotein protein imp3 (21 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Unassigned peptides 1 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 18s rrna (582 kDa, RNA from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Protein sof1 (56 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 14 (103 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Regulator of rdna transcription protein 14 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 10 (200 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s14-a (14 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 13 (91 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 90s pre-ribosome (state a2) (5 MDa, Complex from Saccharomyces cerevisiae S288C)
- Rrna 2'-o-methyltransferase fibrillarin (34 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribosomal rna-processing protein 9 (65 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 snorna (106 kDa, RNA from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s5 (25 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s12 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Pno1 (36 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s9-a (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Nucleolar complex protein 4 (63 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 18 (66 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Nucleolar protein 58 (57 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar ribonucleoprotein protein imp4 (33 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 22 (140 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- 40s ribosomal protein s28-a (7 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 8 (80 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rrna biogenesis protein rrp5 (193 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Krr1 small subunit processome component (37 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Magnesium ion (24 Da, Ligand)
- 40s ribosomal protein s18-a (17 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- U3 small nucleolar rna-associated protein 11 (29 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Drosophila melanogaster Testis polysome ribosome
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 6xu7
Q-score: 0.308
Hopes T, Norris K, Agapiou M, McCarthy CGP, Lewis PA, O'Connell MJ, Fontana J, Aspden JL
Nucleic Acids Res (2022) 50 pp. 2240-2257 [ DOI: doi:10.1093/nar/gkab606 Pubmed: 34283226 ]
- 40s ribosomal protein s18 (16 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l3 (46 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s26 (12 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s7 (22 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l4 (44 kDa, Protein from Drosophila melanogaster)
- Mrna (3 kDa, RNA from Drosophila melanogaster)
- 60s ribosomal protein l13 (24 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l15 (24 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein sa (24 kDa, Protein from Drosophila melanogaster)
- Ribosomal protein l22-like protein (11 kDa, Protein from Drosophila melanogaster)
- Ip17216p (13 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l31 (13 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s3a (25 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s5a (21 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s9 (21 kDa, Protein from Drosophila melanogaster)
- Ribosomal protein l6, isoform a (26 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l10 (25 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l23 (14 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l27a (17 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s13 (17 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l37a (10 kDa, Protein from Drosophila melanogaster)
- 28s ribosomal rna (1 MDa, RNA from Drosophila melanogaster)
- 60s ribosomal protein l13a (23 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l10a-2 (24 kDa, Protein from Drosophila melanogaster)
- Drosophila melanogaster testis polysome ribosome (Complex from Drosophila melanogaster)
- 60s ribosomal protein l9 (21 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l19 (24 kDa, Protein from Drosophila melanogaster)
- Ta01007p (12 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s16 (16 kDa, Protein from Drosophila melanogaster)
- P-trna (24 kDa, RNA from Drosophila melanogaster)
- 40s ribosomal protein s23 (16 kDa, Protein from Drosophila melanogaster)
- Geo07453p1 (15 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s27 (9 kDa, Protein from Drosophila melanogaster)
- Guanine nucleotide-binding protein subunit beta-like protein (35 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l14 (18 kDa, Protein from Drosophila melanogaster)
- Ubiquitin-60s ribosomal protein l40 (6 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s2 (24 kDa, Protein from Drosophila melanogaster)
- 2s ribosomal rna (9 kDa, RNA from Drosophila melanogaster)
- 40s ribosomal protein s30 (6 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s12 (13 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l5 (33 kDa, Protein from Drosophila melanogaster)
- Re62581p (18 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s29 (6 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l36 (13 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l39 (6 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s4 (29 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s10b (10 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l18 (21 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l8 (27 kDa, Protein from Drosophila melanogaster)
- Rh48056p (12 kDa, Protein from Drosophila melanogaster)
- Ubiquitin-40s ribosomal protein s27a (9 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s28 (7 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s14a (14 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l27 (15 kDa, Protein from Drosophila melanogaster)
- 5.8s ribosomal rna (39 kDa, RNA from Drosophila melanogaster)
- 60s ribosomal protein l32 (15 kDa, Protein from Drosophila melanogaster)
- 18s ribosomal rna (641 kDa, RNA from Drosophila melanogaster)
- 40s ribosomal protein s8 (23 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l38 (8 kDa, Protein from Drosophila melanogaster)
- Geo07301p1 (14 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l11 (20 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l41 (3 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l17 (21 kDa, Protein from Drosophila melanogaster)
- Probable 60s ribosomal protein l37-b (9 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s21 (8 kDa, Protein from Drosophila melanogaster)
- Re25263p (11 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s6 (26 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l18a (20 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s24 (14 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s17 (14 kDa, Protein from Drosophila melanogaster)
- 5s ribosomal rna (38 kDa, RNA from Drosophila melanogaster)
- 40s ribosomal protein s3 (25 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l28 (14 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s19a (16 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s20 (11 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s11 (18 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l24 (6 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s25 (8 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l29 (8 kDa, Protein from Drosophila melanogaster)
- 40s ribosomal protein s15aa (14 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l7a (27 kDa, Protein from Drosophila melanogaster)
- 60s ribosomal protein l7 (26 kDa, Protein from Drosophila melanogaster)
- Fi02809p (14 kDa, Protein from Drosophila melanogaster)
- Geo07455p1 (17 kDa, Protein from Drosophila melanogaster)
55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 7nsi
Q-score: 0.228
Kummer E, Schubert KN, Schoenhut T, Scaiola A, Ban N
Mol Cell (2021) 81 pp. 2566-2582.e6 [ DOI: doi:10.1016/j.molcel.2021.03.042 Pubmed: 33878294 ]
- 39s ribosomal protein l18, mitochondrial isoform 1 (20 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s22 (43 kDa, Protein from Sus scrofa)
- Mrna (1 kDa, RNA from Sus scrofa)
- Ul14m (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s33 (12 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s26, mitochondrial (23 kDa, Protein from Sus scrofa)
- 12s rrna (308 kDa, RNA from Sus scrofa)
- Mitochondrial ribosomal protein s11 (20 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l59, mitochondrial (25 kDa, Protein from Sus scrofa)
- Pentatricopeptide repeat domain 3,pentatricopeptide repeat domain 3,ms39,pentatricopeptide repeat domain 3,pentatricopeptide repeat domain 3 (76 kDa, Protein from Sus scrofa)
- Tgs domain-containing protein (38 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l49, mitochondrial (18 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l12 (21 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l17, mitochondrial (19 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s18a (22 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Sus scrofa)
- Bl32m (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l45 (35 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l21, mitochondrial isoform d (23 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l37, mitochondrial (47 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l58 (23 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from Sus scrofa)
- Interferon alpha-inducible protein 6 (19 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s14, mitochondrial (15 kDa, Protein from Sus scrofa)
- Zinc ion (65 Da, Ligand)
- 28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Sus scrofa)
- Spermine (202 Da, Ligand)
- Coiled-coil-helix-coiled-coil-helix domain containing 1 (13 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s18c, mitochondrial isoform 1 (16 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l50, mitochondrial (22 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l40 (24 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Sus scrofa)
- 55s mammalian mitochondrial ribosome with mtrrf (pre) and trna(p/e) (Complex)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l11, mitochondrial isoform a (20 kDa, Protein from Sus scrofa)
- Unknown (1 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s5, mitochondrial isoform x2 (48 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l43, mitochondrial isoform x2 (17 kDa, Protein from Sus scrofa)
- Guanosine-5'-monophosphate (363 Da, Ligand)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l4 (33 kDa, Protein from Sus scrofa)
- Ribosome-recycling factor, mitochondrial (Complex from Homo sapiens)
- Mitochondrial ribosomal protein s6 (30 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l46, mitochondrial (32 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l55 (15 kDa, Protein from Sus scrofa)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ml53 (12 kDa, Protein from Sus scrofa)
- Trna (p/e) (21 kDa, RNA from Sus scrofa)
- Mitochondrial ribosomal protein s34 (25 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l10, mitochondrial isoform a (29 kDa, Protein from Sus scrofa)
- Death associated protein 3 (46 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s2, mitochondrial (31 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l57 (12 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l41 (15 kDa, Protein from Sus scrofa)
- Ribosomal_l2_c domain-containing protein (33 kDa, Protein from Sus scrofa)
- Mitoribosomal protein us12m, mrps12 (15 kDa, Protein from Sus scrofa)
- 55s mammalian mitochondrial ribosome (Complex from Sus scrofa)
- 28s ribosomal protein s7, mitochondrial (28 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s27 (51 kDa, Protein from Sus scrofa)
- Ml42 (16 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s28, mitochondrial (21 kDa, Protein from Sus scrofa)
- Ribosomal protein (10 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l48, mitochondrial (29 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l20, mitochondrial isoform 1 (17 kDa, Protein from Sus scrofa)
- Ict1 (43 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s15, mitochondrial (27 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l47 (30 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s10, mitochondrial (23 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l27, mitochondrial (15 kDa, Protein from Sus scrofa)
- 16s rrna (504 kDa, RNA from Sus scrofa)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s35, mitochondrial isoform 1 (37 kDa, Protein from Sus scrofa)
- Aurora kinase a interacting protein 1 (22 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s24, mitochondrial (18 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from Sus scrofa)
- Water (18 Da, Ligand)
- 39s ribosomal protein l24, mitochondrial isoform x1 (24 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s23 (21 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Sus scrofa)
- 39s ribosomal protein s30, mitochondrial (49 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s31, mitochondrial (44 kDa, Protein from Sus scrofa)
- Us17m (14 kDa, Protein from Sus scrofa)
- Ribosome-recycling factor, mitochondrial (28 kDa, Protein from Homo sapiens)
- 28s ribosomal protein s9, mitochondrial (45 kDa, Protein from Sus scrofa)
- Cp trnaphe (23 kDa, RNA from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from Sus scrofa)
Resolution: 4.36 Å
EM Method: Single-particle
Fitted PDBs: 7nrd
Q-score: 0.363
Pochopien AA, Beckert B, Kasvandik S, Berninghausen O, Beckmann R, Tenson T, Wilson DN
PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2022756118 Pubmed: 33790014 ]
- 60s ribosomal protein l19-a (21 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s3 (24 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l30 (10 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l36-a (11 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s30-a (5 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l29 (6 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s23-a (15 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s27-a (8 kDa, Protein from Baker's yeast)
- Multiprotein-bridging factor 1 (13 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l33-a (12 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l27-a (15 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s9-a (21 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l23-a (14 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l4-a (39 kDa, Protein from Baker's yeast)
- Tpa_inf: saccharomyces cerevisiae s288c chromosome xii, complete sequence (579 kDa, RNA from Saccharomyces cerevisiae S288C)
- 40s ribosomal protein s22-a (14 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l20-a (20 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l7-a (25 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l38 (8 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l15-a (24 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l34-a (12 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s16-a (15 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l42-a (11 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s6-a (24 kDa, Protein from Baker's yeast)
- 25s rrna (3184-mer) (1 MDa, RNA from Saccharomyces cerevisiae S288C)
- 60s ribosomal protein l8-a (25 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s28-a (7 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l2-a (27 kDa, Protein from Baker's yeast)
- Guanine nucleotide-binding protein subunit beta-like protein (34 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l10 (25 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s7-a (21 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l43-a (9 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s1-a (24 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s29-a (6 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l16-a (22 kDa, Protein from Baker's yeast)
- Ubiquitin-60s ribosomal protein l40 (6 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s5 (22 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l22-a (11 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s2 (23 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l6-b (18 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s19-a (15 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s13 (16 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l13-a (21 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l35-a (13 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l3 (43 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l31-a (12 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l25 (13 kDa, Protein from Baker's yeast)
- Mrna (32-mer) (9 kDa, RNA from Saccharomyces cerevisiae S288c)
- 60s ribosomal protein l5 (33 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l41-b (3 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s18-a (16 kDa, Protein from Baker's yeast)
- Trna (75-mer) (24 kDa, RNA from Baker's yeast)
- 60s ribosomal protein l37-a (9 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s17-b (14 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s8-a (21 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s21-a (9 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s15 (13 kDa, Protein from Baker's yeast)
- 5s rrna (121-mer) (38 kDa, RNA from Saccharomyces cerevisiae S288c)
- 60s ribosomal protein l14-a (14 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l26-a (14 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s12 (13 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s4-a (29 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s20 (11 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s26-b (11 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l9-a (21 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s24-a (15 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l32 (14 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l28 (16 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l24-a (7 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l11-b (19 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s25-a (7 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s14-b (13 kDa, Protein from Baker's yeast)
- Structure of the yeast gcn1-bound coilliding stalled 80s ribosome with mbf1, gir2, a/p-trna and p/e-trna (Complex from Saccharomyces cerevisiae S288c)
- 60s ribosomal protein l21-a (18 kDa, Protein from Baker's yeast)
- 5.8s rrna (158-mer) (50 kDa, RNA from Saccharomyces cerevisiae S288c)
- Trna (77-mer) (24 kDa, RNA from Saccharomyces cerevisiae S288c)
- 60s ribosomal protein l39 (6 kDa, Protein from Baker's yeast)
- Ubiquitin-40s ribosomal protein s31 (8 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l18-a (20 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s0-a (22 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s11-a (16 kDa, Protein from Baker's yeast)
- 60s ribosomal protein l17-a (20 kDa, Protein from Baker's yeast)
- 40s ribosomal protein s10-a (11 kDa, Protein from Baker's yeast)