Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 8emm
Q-score: 0.678
Watson ZL, Knudson IJ, Ward FR, Miller SJ, Cate JHD, Schepartz A, Abramyan AM
Nat Chem (2023) 15 pp. 913-921 [ Pubmed: 37308707 DOI: doi:10.1038/s41557-023-01226-w ]
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli)
- Met-nh-trna (24 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli)
- Potassium ion (39 Da, Ligand)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli)
- Spermine (202 Da, Ligand)
- Methionine (149 Da, Ligand)
- Paromomycin (615 Da, Ligand)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli)
- Water (18 Da, Ligand)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli)
- Spermidine (145 Da, Ligand)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli)
- Mrna (9 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli)
- 23s rrna (941 kDa, RNA from Escherichia coli)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli)
- Ribosomal protein l21 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli)
- 16s rrna (499 kDa, RNA from Escherichia coli)
- 70s ribosome complex with mrna, a- and p-site met-nh-trnas (Complex from Escherichia coli)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli)
- 5s rrna (38 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli)
A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7uvv
Q-score: 0.61
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Streptothricin f (502 Da, Ligand)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- Sf-70s ribosome complex with p-site trna (Complex from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- Mrna (935 Da, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
A. baumannii 70S ribosome-Streptothricin-F complex
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 7uvx
Q-score: 0.618
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
- Sf-70s ribosome complex (Complex from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Streptothricin f (502 Da, Ligand)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 7uvy
Q-score: 0.622
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Water (18 Da, Ligand)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- Sd-70s ribosome complex with p-site trna (Complex from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- Streptothricin d (758 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- Mrna (935 Da, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 7uvz
Q-score: 0.637
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- Sd-70s ribosome complex with e-site trna (Complex from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Water (18 Da, Ligand)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- Trna-met (24 kDa, RNA from Acinetobacter baumannii AB0057)
- Streptothricin d (758 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- Mrna (935 Da, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
A. baumannii 70S ribosome-Streptothricin-D complex
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 7uw1
Q-score: 0.639
Morgan CE, Kang YS, Green AB, Smith KP, Dowgiallo MG, Miller BC, Chiaraviglio L, Truelson KA, Zulauf KE, Rodriguez S, Kang AD, Manetsch R, Yu EW, Kirby JE
PLoS Biol (2023) 21 pp. e3002091-e3002091 [ Pubmed: 37192172 DOI: doi:10.1371/journal.pbio.3002091 ]
- 30s ribosomal protein s18 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l4 (21 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l20 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l13 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l5 (20 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s13 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l16 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s17 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l22 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l35 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l18 (12 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l36 (4 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s12 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s3 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s10 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s6 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s8 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s20 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l32 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 16s ribosomal rna (500 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s16 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l2 (30 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s14 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l19 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Sd-70s ribosome complex (Complex from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l6 (19 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s9 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s11 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- Water (18 Da, Ligand)
- 50s ribosomal protein l14 (13 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l33 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l3 (22 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l29 (7 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s4 (23 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l23 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 23s ribosomal rna (945 kDa, RNA from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l30 (6 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s2 (27 kDa, Protein from Acinetobacter baumannii AB0057)
- Magnesium ion (24 Da, Ligand)
- Streptothricin d (758 Da, Ligand)
- 50s ribosomal protein l24 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l17 (14 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s19 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l34 (5 kDa, Protein from Acinetobacter baumannii AB0057)
- Zinc ion (65 Da, Ligand)
- 5s ribosomal rna (36 kDa, RNA from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s21 (8 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s15 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l15 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l27 (9 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s7 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 30s ribosomal protein s5 (17 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l9 (15 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l25 (10 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l21 (11 kDa, Protein from Acinetobacter baumannii AB0057)
- 50s ribosomal protein l28 (9 kDa, Protein from Acinetobacter baumannii AB0057)
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 7n2c
Q-score: 0.533
Rundlet EJ, Holm M, Schacherl M, Natchiar SK, Altman RB, Spahn CMT, Myasnikov AG, Blanchard SC
Nature (2021) 595 pp. 741-745 [ Pubmed: 34234344 DOI: doi:10.1038/s41586-021-03713-x ]
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l1 (24 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli (strain K12))
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli (strain K12))
- Chains: pt (24 kDa, RNA from Escherichia coli)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli (strain K12))
- Chains: mr (19 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli (strain K12))
- 1,4-diaminobutane (88 Da, Ligand)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli (strain K12))
- Fusidic acid (516 Da, Ligand)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli (strain K12))
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli (strain K12))
- Elongation factor g (77 kDa, Protein from Escherichia coli (strain K12))
- Trna (24 kDa, RNA from Escherichia coli)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli (strain K12))
- Elongating 70s ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to ef-g(gdp) (int2) (Complex from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli (strain K12))
- Spermidine (145 Da, Ligand)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli (strain K12))
- 23s rrna (941 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli (strain K12))
- 16s rrna (497 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l10 (17 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli (strain K12))
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli (strain K12))
- Polypeptide (425 Da, Protein from Escherichia coli K-12)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli (strain K12))
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli (strain K12))
- 5s rrna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l7/l12 (12 kDa, Protein from Escherichia coli (strain K12))
Resolution: 2.54 Å
EM Method: Single-particle
Fitted PDBs: 7n2v
Q-score: 0.572
Rundlet EJ, Holm M, Schacherl M, Natchiar SK, Altman RB, Spahn CMT, Myasnikov AG, Blanchard SC
Nature (2021) 595 pp. 741-745 [ Pubmed: 34234344 DOI: doi:10.1038/s41586-021-03713-x ]
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- Elongating 70s ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to ef-g in an active, gtp conformation (int1) (Complex from Escherichia coli K-12)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli K-12)
- Spectinomycin (332 Da, Ligand)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 1,4-diaminobutane (88 Da, Ligand)
- 16s rrna (497 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- Nascent peptide (425 Da, Protein from Escherichia coli K-12)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l10 (17 kDa, Protein from Escherichia coli K-12)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Water (18 Da, Ligand)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l11 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- Spermidine (145 Da, Ligand)
- Mrna (19 kDa, RNA from Escherichia coli BL21)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- Magnesium ion (24 Da, Ligand)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli K-12)
- 23s rrna (941 kDa, RNA from Escherichia coli K-12)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- Elongation factor g (77 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli K-12)
- 5s rrna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli K-12)
- Trna (34 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- Trna (34 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)
Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 7n30
Q-score: 0.592
Rundlet EJ, Holm M, Schacherl M, Natchiar SK, Altman RB, Spahn CMT, Myasnikov AG, Blanchard SC
Nature (2021) 595 pp. 741-745 [ Pubmed: 34234344 DOI: doi:10.1038/s41586-021-03713-x ]
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli (strain K12))
- 5s rrna (38 kDa, RNA from Escherichia coli (strain K12))
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli (strain K12))
- 1,4-diaminobutane (88 Da, Ligand)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli (strain K12))
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli (strain K12))
- 16s rrna (497 kDa, RNA from Escherichia coli (strain K12))
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli (strain K12))
- Spermidine (145 Da, Ligand)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli (strain K12))
- Mrna (19 kDa, RNA from Escherichia coli BL21)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli (strain K12))
- Nascent peptide (425 Da, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli (strain K12))
- Trna (24 kDa, RNA from Escherichia coli K-12)
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli (strain K12))
- Magnesium ion (24 Da, Ligand)
- Trna (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli (strain K12))
- Elongating 70s ribosome complex in a hybrid-h2* pre-translocation (pre-h2*) conformation (Complex from Escherichia coli K-12)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli (strain K12))
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli (strain K12))
- 23s rrna (941 kDa, RNA from Escherichia coli (strain K12))
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli (strain K12))
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli (strain K12))
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli (strain K12))
Elongating 70S ribosome complex in a post-translocation (POST) conformation
Resolution: 2.69 Å
EM Method: Single-particle
Fitted PDBs: 7n31
Q-score: 0.599
Rundlet EJ, Holm M, Schacherl M, Natchiar SK, Altman RB, Spahn CMT, Myasnikov AG, Blanchard SC
Nature (2021) 595 pp. 741-745 [ Pubmed: 34234344 DOI: doi:10.1038/s41586-021-03713-x ]
- 30s ribosomal protein s3 (26 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l6 (18 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s9 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l15 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l5 (20 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s13 (13 kDa, Protein from Escherichia coli K-12)
- Elongating 70s ribosome complex in a post-translocation (post) conformation (Complex from Escherichia coli K-12)
- 30s ribosomal protein s8 (14 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s18 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s21 (8 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s7 (20 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l2 (29 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l14 (13 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s6 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s2 (26 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s12 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l4 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l19 (13 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l20 (13 kDa, Protein from Escherichia coli K-12)
- 16s rrna (497 kDa, RNA from Escherichia coli K-12)
- 1,4-diaminobutane (88 Da, Ligand)
- 50s ribosomal protein l33 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l22 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l13 (16 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s19 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l16 (15 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s10 (11 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s17 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l17 (14 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l35 (7 kDa, Protein from Escherichia coli K-12)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 30s ribosomal protein s5 (17 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l25 (10 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s16 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l32 (6 kDa, Protein from Escherichia coli K-12)
- Spermidine (145 Da, Ligand)
- Mrna (19 kDa, RNA from Escherichia coli BL21)
- 30s ribosomal protein s15 (10 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l27 (9 kDa, Protein from Escherichia coli K-12)
- Trna (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l3 (22 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l29 (7 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s14 (11 kDa, Protein from Escherichia coli K-12)
- Magnesium ion (24 Da, Ligand)
- Polypeptide (425 Da, Protein from Escherichia coli K-12)
- 30s ribosomal protein s11 (13 kDa, Protein from Escherichia coli K-12)
- 23s rrna (941 kDa, RNA from Escherichia coli K-12)
- Trna (24 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l34 (5 kDa, Protein from Escherichia coli K-12)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l36 (4 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l23 (11 kDa, Protein from Escherichia coli K-12)
- 5s rrna (38 kDa, RNA from Escherichia coli K-12)
- 50s ribosomal protein l28 (9 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s20 (9 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l30 (6 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l18 (12 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l31 (7 kDa, Protein from Escherichia coli K-12)
- 30s ribosomal protein s4 (23 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l9 (15 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l24 (11 kDa, Protein from Escherichia coli K-12)
- 50s ribosomal protein l21 (11 kDa, Protein from Escherichia coli K-12)