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sample_name:"Ribosome complex" AND xref_links:"pdbekb" AND natural_source_ncbi_code:"562"
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Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)

Release date: June 26, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8fzf
Q-score: 0.499

Li L, Rybak MY, Lin J, Gagnon MG

Nat Struct Mol Biol (2024) 31 pp. 1909-1920 [ DOI: doi:10.1038/s41594-024-01360-0 Pubmed: 39030416 ]

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Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates

Release date: May 31, 2023
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 8emm
Q-score: 0.678

Watson ZL, Knudson IJ, Ward FR, Miller SJ, Cate JHD, Schepartz A, Abramyan AM

Nat Chem (2023) 15 pp. 913-921 [ Pubmed: 37308707 DOI: doi:10.1038/s41557-023-01226-w ]

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Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

Release date: Oct. 20, 2021
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 7pjs
Q-score: 0.612

Petrychenko V, Peng BZ, Schwarzer AC, Peske F, Rodnina MV, Fischer N

Nat Commun (2021) 12 pp. 5933- [ DOI: doi:10.1038/s41467-021-26133-x ]

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Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Release date: Oct. 20, 2021
Resolution: 6.0 Å
EM Method: Single-particle
Fitted PDBs: 7pjt
Q-score: 0.268

Petrychenko V, Peng BZ, de A P Schwarzer AC, Peske F, Rodnina MV, Fischer N

Nat Commun (2021) 12 pp. 5933-5933 [ Pubmed: 34635670 DOI: doi:10.1038/s41467-021-26133-x ]

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Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)

Release date: Oct. 20, 2021
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7pjw
Q-score: 0.364

Petrychenko V, Peng BZ, de A P Schwarzer AC, Peske F, Rodnina MV, Fischer N

Nat Commun (2021) 12 pp. 5933-5933 [ Pubmed: 34635670 DOI: doi:10.1038/s41467-021-26133-x ]

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Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)

Release date: Oct. 20, 2021
Resolution: 6.5 Å
EM Method: Single-particle
Fitted PDBs: 7pjx
Q-score: 0.169

Petrychenko V, Peng BZ, de A P Schwarzer AC, Peske F, Rodnina MV, Fischer N

Nat Commun (2021) 12 pp. 5933-5933 [ Pubmed: 34635670 DOI: doi:10.1038/s41467-021-26133-x ]

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Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

Release date: Oct. 20, 2021
Resolution: 6.0 Å
EM Method: Single-particle
Fitted PDBs: 7pjz
Q-score: 0.229

Petrychenko V, Peng BZ, de A P Schwarzer AC, Peske F, Rodnina MV, Fischer N

Nat Commun (2021) 12 pp. 5933-5933 [ Pubmed: 34635670 DOI: doi:10.1038/s41467-021-26133-x ]

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Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Release date: July 14, 2021
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 7n2c
Q-score: 0.533

Rundlet EJ, Holm M, Schacherl M, Natchiar SK, Altman RB, Spahn CMT, Myasnikov AG, Blanchard SC

Nature (2021) 595 pp. 741-745 [ Pubmed: 34234344 DOI: doi:10.1038/s41586-021-03713-x ]

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Structure of the P+9 stalled ribosome complex

Release date: Aug. 19, 2020
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6ysr
Q-score: 0.528

Chan KH, Petrychenko V, Mueller C, Maracci C, Holtkamp W, Wilson DN, Fischer N, Rodnina MV

Nat Commun (2020) 11 pp. 4106-4106 [ Pubmed: 32796827 DOI: doi:10.1038/s41467-020-17853-7 ]

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TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel

Release date: Dec. 5, 2018
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6i0y
Q-score: 0.305

Tian P, Steward A, Kudva R, Su T, Shilling PJ, Nickson AA, Hollins JJ, Beckmann R, von Heijne G, Clarke J, Best RB

PNAS (2018) 115 pp. E11284-E11293 [ DOI: doi:10.1073/pnas.1810523115 Pubmed: 30413621 ]

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