Cryo-EM structure of native SWR1 bound to DNA (composite structure)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9b1d
Q-score: 0.435
Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C
Cell (2024) 187 pp. 6849-6864.e18 [ DOI: doi:10.1016/j.cell.2024.09.007 Pubmed: 39357520 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Native swr1 bound to dna. (1 MDa, Complex from Saccharomyces cerevisiae)
- Ruvb-like protein 2 (51 kDa, Protein from Saccharomyces cerevisiae W303)
- Dna (147-mer) (45 kDa, DNA from synthetic construct)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Actin-like protein arp6 (50 kDa, Protein from Saccharomyces cerevisiae W303)
- Dna (147-mer) (45 kDa, DNA from synthetic construct)
- Helicase swr1 (178 kDa, Protein from Saccharomyces cerevisiae W303)
- Native swr1 complex (Complex from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Vacuolar protein sorting-associated protein 71 (32 kDa, Protein from Saccharomyces cerevisiae W303)
- Ruvb-like protein 1 (91 kDa, Protein from Saccharomyces cerevisiae W303)
- Vacuolar protein sorting-associated protein 72 (90 kDa, Protein from Saccharomyces cerevisiae W303)
Cryo-EM structure of native SWR1 bound to nucleosome (composite structure)
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 9b1e
Q-score: 0.191
Louder RK, Park G, Ye Z, Cha JS, Gardner AM, Lei Q, Ranjan A, Hollmuller E, Stengel F, Pugh BF, Wu C
Cell (2024) 187 pp. 6849-6864.e18 [ DOI: doi:10.1016/j.cell.2024.09.007 Pubmed: 39357520 ]
- Ruvb-like protein 2 (51 kDa, Protein from Saccharomyces cerevisiae W303)
- Dna (214-mer) (65 kDa, DNA from synthetic construct)
- Swr1-complex protein 3 (72 kDa, Protein from Saccharomyces cerevisiae W303)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Native swr1 bound to nucleosome. (1 MDa, Complex from Saccharomyces cerevisiae)
- Actin-like protein arp6 (50 kDa, Protein from Saccharomyces cerevisiae W303)
- Helicase swr1 (178 kDa, Protein from Saccharomyces cerevisiae W303)
- Vacuolar protein sorting-associated protein 72 (90 kDa, Protein from Saccharomyces cerevisiae W303)
- Histone h2b (14 kDa, Protein from Saccharomyces cerevisiae)
- Histone h2a (14 kDa, Protein from Saccharomyces cerevisiae)
- Native swr1 complex (Complex from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Vacuolar protein sorting-associated protein 71 (32 kDa, Protein from Saccharomyces cerevisiae W303)
- Zinc ion (65 Da, Ligand)
- Histone h3 (15 kDa, Protein from Drosophila melanogaster)
- Beryllium trifluoride ion (66 Da, Ligand)
- Histone h4 (11 kDa, Protein from Drosophila melanogaster)
- Ruvb-like protein 1 (91 kDa, Protein from Saccharomyces cerevisiae W303)
- Dna (214-mer) (66 kDa, DNA from synthetic construct)