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sample_name:"S4" AND author_name:"Shirouzu M"
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E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site

Release date: Nov. 6, 2024
Resolution: 2.25 Å
EM Method: Single-particle
Fitted PDBs: 8yuo

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 8yup
Q-score: 0.651

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ Pubmed: 39300229 DOI: doi:10.1038/s41589-024-01726-x ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.41 Å
EM Method: Single-particle
Fitted PDBs: 8yuq
Q-score: 0.651

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ Pubmed: 39300229 DOI: doi:10.1038/s41589-024-01726-x ]

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E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.47 Å
EM Method: Single-particle
Fitted PDBs: 8yur

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA

Release date: Nov. 6, 2024
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 8yus

Miyauchi K, Kimura S, Akiyama N, Inoue K, Ishiguro K, Vu TS, Srisuknimit V, Koyama K, Hayashi G, Soma A, Nagao A, Shirouzu M, Okamoto A, Waldor MK, Suzuki T

Nat Chem Biol (2024) [ DOI: doi:10.1038/s41589-024-01726-x Pubmed: 39300229 ]

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E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state

Release date: April 3, 2024
Resolution: 2.32 Å
EM Method: Single-particle
Fitted PDBs: 8hsp

Akiyama N, Ishiguro K, Yokoyama T, Miyauchi K, Nagao A, Shirouzu M, Suzuki T

Nat Struct Mol Biol (2024) 31 pp. 817-825 [ DOI: doi:10.1038/s41594-024-01238-1 Pubmed: 38538915 ]

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E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical state

Release date: April 3, 2024
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8htz
Q-score: 0.657

Akiyama N, Ishiguro K, Yokoyama T, Miyauchi K, Nagao A, Shirouzu M, Suzuki T

Nat Struct Mol Biol (2024) 31 pp. 817-825 [ Pubmed: 38538915 DOI: doi:10.1038/s41594-024-01238-1 ]

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E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state

Release date: April 3, 2024
Resolution: 2.69 Å
EM Method: Single-particle
Fitted PDBs: 8hu1
Q-score: 0.599

Akiyama N, Ishiguro K, Yokoyama T, Miyauchi K, Nagao A, Shirouzu M, Suzuki T

Nat Struct Mol Biol (2024) 31 pp. 817-825 [ Pubmed: 38538915 DOI: doi:10.1038/s41594-024-01238-1 ]

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Wheat 80S ribosome stalled on AUG-Stop boron dependently

Release date: Feb. 21, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ip8
Q-score: 0.579

Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T

Nat Chem Biol (2024) 20 pp. 605-614 [ DOI: doi:10.1038/s41589-023-01513-0 Pubmed: 38267667 ]

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Wheat 40S ribosome in complex with a tRNAi

Release date: Feb. 21, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8ip9
Q-score: 0.53

Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T

Nat Chem Biol (2024) 20 pp. 605-614 [ DOI: doi:10.1038/s41589-023-01513-0 Pubmed: 38267667 ]

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