EMDB < Search results

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

Edit your search query here and hit Return to execute it:

sample_name:"S4" AND xref_links:"pfam" AND author_name:"Zhang Y" AND xref_links:"cath"

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

EMD-7024

Download Map 3D View

Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin

Release date: Dec. 6, 2017
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 6az1
Q-score: 0.566

Shalev-Benami M, Zhang Y, Rozenberg H, Nobe Y, Taoka M, Matzov D, Zimmerman E, Bashan A, Isobe T, Jaffe CL, Yonath A, Skiniotis G

Nat Commun (2017) 8 pp. 1589-1589 [ Pubmed: 29150609 DOI: doi:10.1038/s41467-017-01664-4 ]

Sample:

Ribosomal protein s17e (16 kDa, Protein from Leishmania donovani)
Leishmania donovani 91s ribosome ssu (Complex from Leishmania donovani)
Ribosomal protein s8e (25 kDa, Protein from Leishmania donovani)
Ribosomal protein s24e (15 kDa, Protein from Leishmania donovani)
Ribosomal protein s4 (22 kDa, Protein from Leishmania donovani)
Ribosomal protein s19e (20 kDa, Protein from Leishmania donovani)
Ribosomal protein s12e (15 kDa, Protein from Leishmania donovani)
Ribosomal protein s4e (30 kDa, Protein from Leishmania donovani)
Ribosomal protein s10e (17 kDa, Protein from Leishmania donovani)
Ribosomal protein s19 (17 kDa, Protein from Leishmania donovani)
Ribosomal protein s31e (17 kDa, Protein from Leishmania donovani)
Ribosomal protein s17 (19 kDa, Protein from Leishmania donovani)
Ribosomal protein s27e (9 kDa, Protein from Leishmania donovani)
Ribosomal protein s2 (27 kDa, Protein from Leishmania donovani)
Mrna (4 kDa, RNA from Leishmania donovani)
Ribosomal protein s11 (15 kDa, Protein from Leishmania donovani)
Paromomycin (615 Da, Ligand)
E-site trna (24 kDa, RNA from Escherichia coli)
Ribosomal protein s8 (14 kDa, Protein from Leishmania donovani)
Ribosomal protein s10 (13 kDa, Protein from Leishmania donovani)
Ribosomal protein s3 (24 kDa, Protein from Leishmania donovani)
Ribosomal protein s28e (9 kDa, Protein from Leishmania donovani)
Water (18 Da, Ligand)
Ribosomal protein s1e (30 kDa, Protein from Leishmania donovani)
Ribosomal protein s12 (15 kDa, Protein from Leishmania donovani)
Ribosomal rna 18s (710 kDa, RNA from Leishmania donovani)
Ribosomal protein s15 (17 kDa, Protein from Leishmania donovani)
Ribosomal protein s7e (23 kDa, Protein from Leishmania donovani)
Ribosomal protein s21e (16 kDa, Protein from Leishmania donovani)
Trna-phe (24 kDa, RNA from Escherichia coli)
Magnesium ion (24 Da, Ligand)
Ribosomal protein s30e (7 kDa, Protein from Leishmania donovani)
Ribosomal protein s26e (12 kDa, Protein from Leishmania donovani)
Lack1 (34 kDa, Protein from Leishmania donovani)
Ribosomal protein s25e (13 kDa, Protein from Leishmania donovani)
Ribosomal protein s14 (6 kDa, Protein from Leishmania donovani)
Ribosomal protein s5 (28 kDa, Protein from Leishmania donovani)
Ribosomal protein s9 (16 kDa, Protein from Leishmania donovani)
Ribosomal protein s13 (17 kDa, Protein from Leishmania donovani)
Ribosomal protein s7 (21 kDa, Protein from Leishmania donovani)
P-site trna (24 kDa, RNA from Escherichia coli)
Ribosomal protein s6e (28 kDa, Protein from Leishmania donovani)

[Show more]

EMD-6790

Download Map 3D View

Small subunit of Mycobacterium smegmatis ribosome

Release date: Sept. 27, 2017
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 5xyu
Q-score: 0.482

Li Z, Ge X, Zhang Y, Zheng L, Sanyal S, Gao N

Protein Cell (2018) 9 pp. 384-388 [ DOI: doi:10.1007/s13238-017-0456-9 Pubmed: 28875450 ]

Sample:

30s ribosomal protein s7 (17 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s19 (10 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s17 (11 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
Conserved domain protein (4 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s5 (21 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s16 (16 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s8 (14 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
Small subunit of mycobacterium smegmatis ribosome (Complex from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s20 (9 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s15 (10 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s18 2 (9 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s13 (14 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s3 (30 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
Magnesium ion (24 Da, Ligand)
16s rna (495 kDa, RNA from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s9 (16 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s6 (10 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s12 (13 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s4 (23 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s14 type z (6 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s11 (14 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
30s ribosomal protein s10 (11 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: