SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with two human ACE2 Bound
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 7xo7
Q-score: 0.219
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ DOI: doi:10.1038/s41422-022-00672-4 Pubmed: 35641567 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 omicron ba.2 variant spike trimer with two human ace2 bound (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron ba.2 variant spike trimer (Complex)
- Chloride ion (35 Da, Ligand)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Human angiotensin-converting enzyme 2 (Complex from Homo sapiens)
SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with three human ACE2 Bound
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 7xo8
Q-score: 0.154
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ DOI: doi:10.1038/s41422-022-00672-4 Pubmed: 35641567 ]
- Zinc ion (65 Da, Ligand)
- Chloride ion (35 Da, Ligand)
- Human ace2 (Complex from Homo sapiens)
- Sars-cov-2 omicron ba.2 variant spike trimer with three human ace2 bound (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Homo sapiens)
- Sars-cov-2 omicron ba.2 variant spike trimer (Complex)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with one mouse ACE2 Bound
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7xoa
Q-score: 0.253
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ DOI: doi:10.1038/s41422-022-00672-4 Pubmed: 35641567 ]
- Mouse angiotensin-converting enzyme 2 (Complex from Mus musculus)
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 omicron ba.2 variant spike trimer (Complex)
- Sars-cov-2 omicron ba.2 variant spike trimer with one mouse ace2 bound (Complex from Severe acute respiratory syndrome coronavirus 2)
- Zinc ion (65 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with two mouse ACE2 Bound
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7xob
Q-score: 0.23
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ DOI: doi:10.1038/s41422-022-00672-4 Pubmed: 35641567 ]
- Angiotensin-converting enzyme 2 (92 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 omicron ba.2 variant spike trimer (Complex)
- Sars-cov-2 omicron ba.2 variant spike trimer with two mouse ace2 bound (Complex from Mus musculus)
- Mouse angiotensin-converting enzyme 2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Zinc ion (65 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with three JMB2002 Fab Bound
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 7xod
Q-score: 0.277
Xu Y, Wu C, Cao X, Gu C, Liu H, Jiang M, Wang X, Yuan Q, Wu K, Liu J, Wang D, He X, Wang X, Deng SJ, Xu HE, Yin W
Cell Res (2022) 32 pp. 609-620 [ DOI: doi:10.1038/s41422-022-00672-4 Pubmed: 35641567 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Nanobody (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 omicron ba.2 variant spike trimer (Complex)
- Heavy chain of jmb2002 fab (24 kDa, Protein from Homo sapiens)
- Sars-cov-2 omicron ba.2 variant spike trimer with three jmb2002 fab bound (Complex from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Jmb2002 fab (Complex from Lama glama)
- Light chain of jmb2002 fab (23 kDa, Protein from Homo sapiens)
- Nanobody (13 kDa, Protein from Lama glama)