MutSbeta bound to compound CHDI-00898647 in the canonical DNA-mismatch bound form
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8r7v
Q-score: 0.381
To Be Published
- Dna mismatch repair protein msh2 (104 kDa, Protein from Homo sapiens)
- Dna_61bp_complement_rev (18 kDa, DNA from Homo sapiens)
- ~{n}-[3-[[2-[[3-fluoranyl-4-(4-methylpiperazin-1-yl)phenyl]amino]-7~{h}-pyrrolo[2,3-d]pyrimidin-4-yl]oxy]phenyl]prop-2-enamide (487 Da, Ligand)
- Mutsbeta in complex with the mismatched dna and compound (Complex)
- Magnesium ion (24 Da, Ligand)
- Mutsbeta (Complex from Homo sapiens)
- Sulfate ion (96 Da, Ligand)
- Dna mismatch repair protein msh3 (127 kDa, Protein from Homo sapiens)
- Dna_61bp_cag2_loop_fwd (20 kDa, DNA from Homo sapiens)
- Double stranded dna (Complex from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
Cryo-EM structure of the HIV-1 JR-FL IDL Env trimer in complex with PGT122 Fab
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 9ber
Q-score: 0.327
Zhang P, Gorman J, Tsybovsky Y, Lu M, Liu Q, Gopan V, Singh M, Lin Y, Miao H, Seo Y, Kwon A, Olia AS, Chuang GY, Geng H, Lai YT, Zhou T, Mascola JR, Mothes W, Kwong PD, Lusso P
Cell Rep (2024) 43 pp. 114518-114518 [ Pubmed: 39028623 DOI: doi:10.1016/j.celrep.2024.114518 ]
- Pgt122 light chain (11 kDa, Protein from Homo sapiens)
- Cryo-em structure of the hiv-1 jr-fl idl env trimer in complex with pgt122 fab (Complex from Human immunodeficiency virus 1)
- Pgt122 heavy chain (14 kDa, Protein from Homo sapiens)
- Sulfate ion (96 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Envelope glycoprotein gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Envelope glycoprotein gp120 (53 kDa, Protein from Human immunodeficiency virus 1)
Substrate Binding Plasticity Revealed by Cryo-EM Structures of SLC26A2
Nat Commun (2024) 15 pp. 3616-3616 [ DOI: doi:10.1038/s41467-024-48028-3 Pubmed: 38684689 ]
- Sulfate transporter (74 kDa, Protein from Homo sapiens)
- Slc26a2 with sulfate (Complex from Homo sapiens)
- Sulfate ion (96 Da, Ligand)
NaS1 with sulfate - IN/IN state
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8w6h
Q-score: 0.567
Chi X, Chen Y, Li Y, Dai L, Zhang Y, Shen Y, Chen Y, Shi T, Yang H, Wang Z, Yan R
Sci Adv (2024) 10 pp. eadl3685-eadl3685 [ Pubmed: 38552027 DOI: doi:10.1126/sciadv.adl3685 ]
- Sodium ion (22 Da, Ligand)
- Sulfate ion (96 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Solute carrier family 13 member 1 (67 kDa, Protein from Homo sapiens)
- Dimer of nas1 with sulfate in in/in state (Complex from Homo sapiens)
NaS1 with sulfate in IN/OUT state
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8w6n
Q-score: 0.536
Chi X, Chen Y, Li Y, Dai L, Zhang Y, Shen Y, Chen Y, Shi T, Yang H, Wang Z, Yan R
Sci Adv (2024) 10 pp. eadl3685-eadl3685 [ Pubmed: 38552027 DOI: doi:10.1126/sciadv.adl3685 ]
- Structure of nas1 in complex with sulfate (Complex from Homo sapiens)
- Sodium ion (22 Da, Ligand)
- Solute carrier family 13 member 1 (67 kDa, Protein from Homo sapiens)
- Sulfate ion (96 Da, Ligand)