Cryo-EM structure of the trimeric HerA
Resolution: 2.81 Å
EM Method: Single-particle
Fitted PDBs: 8yhx
Q-score: 0.392
Zhen X, Zhou B, Liu Z, Wang X, Zhao H, Wu S, Li Z, Liang J, Zhang W, Zhu Q, He J, Xiong X, Ouyang S
Nat Commun (2024) 15 pp. 9269-9269 [ DOI: doi:10.1038/s41467-024-53614-6 Pubmed: 39465277 ]
- Sir2 family protein (50 kDa, Protein from Staphylococcus aureus)
- Cryo-em structure of the trimeric hera (Complex from Staphylococcus aureus)
- Adenosine-5-diphosphoribose (559 Da, Ligand)
- Duf87 domain-containing protein (65 kDa, Protein from Staphylococcus aureus)
Cryo-EM structure of the monomeric SPARSA gRNA-ssDNA complex
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8y7z
Q-score: 0.587
Cui N, Zhang JT, Li Z, Wei XY, Wang J, Jia N
Nat Commun (2024) 15 pp. 8610-8610 [ Pubmed: 39366953 DOI: doi:10.1038/s41467-024-52910-5 ]
- Monomeric sparsa grna-ssdna complex (Complex from Geobacter sulfurreducens)
- Rna (21-mer) (6 kDa, RNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Piwi domain protein (53 kDa, Protein from Geobacter sulfurreducens)
- Dna (25-mer) (7 kDa, DNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Magnesium ion (24 Da, Ligand)
- Sir2 superfamily protein (66 kDa, Protein from Geobacter sulfurreducens)
Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA complex
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 8y80
Q-score: 0.331
Cui N, Zhang JT, Li Z, Wei XY, Wang J, Jia N
Nat Commun (2024) 15 pp. 8610-8610 [ Pubmed: 39366953 DOI: doi:10.1038/s41467-024-52910-5 ]
- Rna (21-mer) (6 kDa, RNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Piwi domain protein (53 kDa, Protein from Geobacter sulfurreducens)
- Dna (25-mer) (7 kDa, DNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Magnesium ion (24 Da, Ligand)
- Sir2 superfamily protein (66 kDa, Protein from Geobacter sulfurreducens)
- Tetrameric sparsa grna-ssdna complex (Complex from Geobacter sulfurreducens)
Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA-NAD+ complex
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8y82
Q-score: 0.412
Cui N, Zhang JT, Li Z, Wei XY, Wang J, Jia N
Nat Commun (2024) 15 pp. 8610-8610 [ Pubmed: 39366953 DOI: doi:10.1038/s41467-024-52910-5 ]
- Tetrameric sparsagrna-ssdna-nad+ complex (Complex from Geobacter sulfurreducens)
- Rna (21-mer) (6 kDa, RNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Piwi domain protein (53 kDa, Protein from Geobacter sulfurreducens)
- Dna (25-mer) (7 kDa, DNA from Escherichia coli 'BL21-Gold(DE3)pLysS AG')
- Magnesium ion (24 Da, Ligand)
- Adenosine monophosphate (347 Da, Ligand)
- Sir2 superfamily protein (66 kDa, Protein from Geobacter sulfurreducens)
Cryo-EM structure of SIR2/HerA antiphage complex
Yu G, Liao F, Li X, Li Z, Zhang H
To Be Published
- Sir2-like domain-containing protein (43 kDa, Protein from Paenibacillus sp. 453mf)
- Helicase hera central domain-containing protein (77 kDa, Protein from Paenibacillus sp. 453mf)
- Cryo-em structure of sir2/hera complex (400 kDa, Complex from Paenibacillus sp. 453mf)
Cryo-EM structure of SIR2/HerA complex
Yu G, Liao F, Li X, Li Z, Zhang H
To Be Published
- Cryo-em structure of a bacterial protein (400 kDa, Complex from Paenibacillus sp. 453mf)
- Helicase hera central domain-containing protein (77 kDa, Protein from Paenibacillus sp. 453mf)
- Sir2-like domain-containing protein (43 kDa, Protein from Paenibacillus sp. 453mf)
Cryo-EM structure of SIR2/HerA complex
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 8wod
Q-score: 0.342
Yu G, Liao F, Li X, Li Z, Zhang H
To Be Published
- Cryo-em structure of a bacterial protein (400 kDa, Complex from Paenibacillus sp. 453mf)
- Helicase hera central domain-containing protein (77 kDa, Protein from Paenibacillus sp. 453mf)
- Sir2-like domain-containing protein (43 kDa, Protein from Paenibacillus sp. 453mf)