V gamma9 V delta2 TCR and CD3 complex in LMNG
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8jc0
Q-score: 0.438
Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q
Nature (2024) 630 pp. 222-229 [ DOI: doi:10.1038/s41586-024-07439-4 Pubmed: 38657677 ]
- T cell receptor delta variable 2,t cell receptor delta constant (34 kDa, Protein from Homo sapiens)
- V gamma9 v delta2 t cell receptor in complex with cd3 (Complex from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- T cell receptor gamma variable 9,t cell receptor gamma constant 1 (37 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 delta chain (18 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 zeta chain (21 kDa, Protein from Homo sapiens)
T cell receptor delta 2 gamma 9 with F283A, F290A, and F291A
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8wy0
Q-score: 0.402
Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q
Nature (2024) 630 pp. 222-229 [ Pubmed: 38657677 DOI: doi:10.1038/s41586-024-07439-4 ]
- T-cell surface glycoprotein cd3 delta chain (18 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 zeta chain (21 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Signal peptide,flag tag,t cell receptor delta variable 2,t cell receptor delta constant (34 kDa, Protein from Homo sapiens)
- Signal peptide,flag tag,t cell receptor gamma variable 9,t cell receptor gamma constant 1 (37 kDa, Protein from Homo sapiens)
- T cell receptor delta 2 gamma 9 with f283a, f290a, f291a (Cell from Homo sapiens)
T cell receptor delta 2 gamma 9 with TCRD TM domain chimera of TRAC
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8wyi
Q-score: 0.385
Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q
Nature (2024) 630 pp. 222-229 [ DOI: doi:10.1038/s41586-024-07439-4 Pubmed: 38657677 ]
- Signal peptide,flag tag,t cell receptor gamma variable 9,t cell receptor gamma constant 1,t cell receptor gamma variable 9,t cell receptor gamma constant 1 (37 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- T cell receptor delta 2 gamma 9 with tcrd tm domain change to trac tm domain (Complex from Homo sapiens)
- Signal peptide,flag tag,t cell receptor delta variable 2,t cell receptor delta constant,t cell receptor alpha chain constant,t cell receptor delta variable 2,t cell receptor delta constant,t cell receptor alpha chain constant (34 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 delta chain (18 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 zeta chain (21 kDa, Protein from Homo sapiens)
T cell receptor V delta2 V gamma9 in GDN
Resolution: 4.12 Å
EM Method: Single-particle
Fitted PDBs: 8yc0
Q-score: 0.349
Xin W, Huang B, Chi X, Liu Y, Xu M, Zhang Y, Li X, Su Q, Zhou Q
Nature (2024) 630 pp. 222-229 [ DOI: doi:10.1038/s41586-024-07439-4 Pubmed: 38657677 ]
- T cell receptor delta variable 2,t cell receptor delta constant (34 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Tcr v delta2 v gamma 9 in complex with cd3 in gdn (Cell from Homo sapiens)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- T cell receptor gamma variable 9,t cell receptor gamma constant 1 (37 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 delta chain (18 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 zeta chain (21 kDa, Protein from Homo sapiens)