96-nm repeat of axonemal doublet microtubules from bovine sperm
Leung MR, Sun C, Zeng J, Anderson JR, Niu Q, Huang W, Noteborn WEM, Brown A, Zeev-Ben-Mordehai T, Zhang R
To Be Published
- Chromosome 19 c17orf98 homolog (17 kDa, Protein from Bos taurus)
- Cilia and flagella associated protein 299 (26 kDa, Protein from Bos taurus)
- Outer dense fiber of sperm tails 3 (27 kDa, Protein from Bos taurus)
- Stabilizer of axonemal microtubules 3 (37 kDa, Protein from Bos taurus)
- Dynein intermediate chain 2, axonemal isoform x2 (70 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 161 (36 kDa, Protein from Bos taurus)
- Sperm microtubule inner protein 7 (49 kDa, Protein from Bos taurus)
- Protein flattop (21 kDa, Protein from Bos taurus)
- Tepp protein (24 kDa, Protein from Bos taurus)
- T-complex protein 1 subunit delta (58 kDa, Protein from Bos taurus)
- Guanosine-5'-triphosphate (523 Da, Ligand from Bos taurus)
- Ccdc96 protein (63 kDa, Protein from Bos taurus)
- Tektin-3 (56 kDa, Protein from Bos taurus)
- Sperm surface protein sp17 (16 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 2 (508 kDa, Protein from Bos taurus)
- Cilia and flagella associated protein 73 (36 kDa, Protein from Bos taurus)
- Tubulin alpha-3 chain (49 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 10 (521 kDa, Protein from Bos taurus)
- Tektin-5 (56 kDa, Protein from Bos taurus)
- Ropporin-1-like protein (24 kDa, Protein from Bos taurus)
- Coiled-coil domain-containing protein 63 (66 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 144 (16 kDa, Protein from Bos taurus)
- Dynein light chain tctex-type 1 (12 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 17 (509 kDa, Protein from Bos taurus)
- Cilia and flagella associated protein 57 (541 kDa, Protein from Bos taurus)
- Iq motif containing with aaa domain 1 (96 kDa, Protein from Bos taurus)
- Outer dynein arm-docking complex subunit 4 (78 kDa, Protein from Bos taurus)
- Tektin-2 (49 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 276 (19 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 7 (461 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 53 (62 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 43 (192 kDa, Protein from Bos taurus)
- Dynein regulatory complex subunit 4 (56 kDa, Protein from Bos taurus)
- Dynein regulatory complex protein 1 (84 kDa, Protein from Bos taurus)
- A-kinase anchoring protein 14 (172 kDa, Protein from Bos taurus)
- Morn repeat-containing protein 5 (20 kDa, Protein from Bos taurus)
- Theg spermatid protein like (50 kDa, Protein from Bos taurus)
- Wd repeat domain 64 (123 kDa, Protein from Bos taurus)
- Testis expressed 33 (30 kDa, Protein from Bos taurus)
- Tektin bundle interacting protein 1 (24 kDa, Protein from Bos taurus)
- Ciliary microtubule associated protein 1b (32 kDa, Protein from Bos taurus)
- Coiled-coil domain-containing protein 105 (57 kDa, Protein from Bos taurus)
- 96-nm repeat of axonemal doublet microtubules from bovine sperm (Cellular component from Bos taurus)
- Centrin-2 (19 kDa, Protein from Bos taurus)
- Zinc finger mynd-type containing 12 (41 kDa, Protein from Bos taurus)
- Dynein regulatory complex protein 9 (51 kDa, Protein from Bos taurus)
- Sperm-associated antigen 8 (51 kDa, Protein from Bos taurus)
- Outer dynein arm-docking complex subunit 2 (116 kDa, Protein from Bos taurus)
- Dynein light chain roadblock-type 2 (10 kDa, Protein from Bos taurus)
- Upf0602 protein c4orf47 homolog (34 kDa, Protein from Bos taurus)
- Outer dynein arm-docking complex subunit 3 (72 kDa, Protein from Bos taurus)
- T-complex protein 1 subunit theta (59 kDa, Protein from Bos taurus)
- Malate dehydrogenase, cytoplasmic (36 kDa, Protein from Bos taurus)
- Actin, cytoplasmic 2 (41 kDa, Protein from Bos taurus)
- Axonemal dynein light intermediate polypeptide 1 (29 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 20 (141 kDa, Protein from Bos taurus)
- Camp-dependent protein kinase catalytic subunit alpha (40 kDa, Protein from Bos taurus)
- Ef-hand calcium binding domain 10 (15 kDa, Protein from Bos taurus)
- Protein phosphatase 1 regulatory subunit 32 (47 kDa, Protein from Bos taurus)
- Sperm-associated microtubule inner protein 5 (53 kDa, Protein from Bos taurus)
- Radial spoke head protein 9 homolog (528 kDa, Protein from Bos taurus)
- Meiosis-specific nuclear structural protein 1 (60 kDa, Protein from Bos taurus)
- Ef-hand calcium binding domain 6 (172 kDa, Protein from Bos taurus)
- Atp6v1f neighbor (20 kDa, Protein from Bos taurus)
- Putative malate dehydrogenase 1b (467 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 276 (221 kDa, Protein from Bos taurus)
- Tektin-4 (52 kDa, Protein from Bos taurus)
- Tubulin alpha-3 chain (52 kDa, Protein from Bos taurus)
- Protein fam166c (23 kDa, Protein from Bos taurus)
- Chromosome 20 c5orf49 homolog (16 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 141 (12 kDa, Protein from Bos taurus)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Bos taurus)
- Camp-dependent protein kinase type i-alpha regulatory subunit (42 kDa, Protein from Bos taurus)
- T-complex protein 1 subunit beta (57 kDa, Protein from Bos taurus)
- T-complex protein 1 subunit gamma (60 kDa, Protein from Bos taurus)
- Tetratricopeptide repeat protein 29 (54 kDa, Protein from Bos taurus)
- Sperm associated microtubule inner protein 4 (67 kDa, Protein from Bos taurus)
- Regulator of g protein signaling 22 (146 kDa, Protein)
- Cilia and flagella associated protein 58 (103 kDa, Protein from Bos taurus)
- Radial spoke head 14 homolog (41 kDa, Protein from Bos taurus)
- T-complex protein 1 subunit eta (59 kDa, Protein from Bos taurus)
- Dynein light chain 1, cytoplasmic (10 kDa, Protein from Bos taurus)
- Ef-hand domain-containing family member b (97 kDa, Protein from Bos taurus)
- Leucine-rich repeat-containing protein 51 (22 kDa, Protein from Bos taurus)
- Calaxin (24 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 97 domain containing 1 (22 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 91 (89 kDa, Protein from Bos taurus)
- Putative malate dehydrogenase 1b (58 kDa, Protein from Bos taurus)
- Enkurin (30 kDa, Protein from Bos taurus)
- Testis expressed 49 (15 kDa, Protein from Bos taurus)
- Lrp2-binding protein (39 kDa, Protein from Bos taurus)
- Dynein light chain tctex-type protein 2b (17 kDa, Protein from Bos taurus)
- Cilia and flagella associated protein 100 (93 kDa, Protein from Bos taurus)
- Dynein axonemal intermediate chain 3 (147 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 45 (65 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 95 (26 kDa, Protein from Bos taurus)
- Dpy30 domain-containing protein 1 (20 kDa, Protein from Bos taurus)
- Leucine rich repeat containing 34 (49 kDa, Protein from Bos taurus)
- Chromosome 13 c20orf85 homolog (15 kDa, Protein from Bos taurus)
- Dynein regulatory complex protein 10 (51 kDa, Protein from Bos taurus)
- Ciliogenesis-associated ttc17-interacting protein (43 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 107 (23 kDa, Protein from Bos taurus)
- Dynein axonemal intermediate chain 7 (83 kDa, Protein from Bos taurus)
- Ef-hand domain-containing protein 1 (74 kDa, Protein from Bos taurus)
- Sperm acrosome associated 9 (25 kDa, Protein from Bos taurus)
- Dual specificity phosphatase 21 (22 kDa, Protein from Bos taurus)
- Leucine rich repeats and death domain containing 1 (98 kDa, Protein from Bos taurus)
- Wd repeat domain 63 (103 kDa, Protein from Bos taurus)
- Morn repeat-containing protein 3 (27 kDa, Protein from Bos taurus)
- Family with sequence similarity 166 member a (36 kDa, Protein from Bos taurus)
- Calcium/calmodulin dependent protein kinase iv (49 kDa, Protein)
- Ankyrin repeat and ef-hand domain containing 1 (87 kDa, Protein from Bos taurus)
- Parkin coregulated gene protein (29 kDa, Protein from Bos taurus)
- Dynein regulatory complex subunit 2 (58 kDa, Protein from Bos taurus)
- Radial spoke head 6 homolog a (79 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 52 (68 kDa, Protein from Bos taurus)
- T-complex protein 1 subunit epsilon (59 kDa, Protein from Bos taurus)
- Nucleoside diphosphate kinase 7 (42 kDa, Protein from Bos taurus)
- Dynein regulatory complex subunit 3 (60 kDa, Protein from Bos taurus)
- Cytochrome b5 domain-containing protein 1 (26 kDa, Protein from Bos taurus)
- T-complex-associated-testis-expressed 1 (55 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 1 (488 kDa, Protein from Bos taurus)
- Coiled-coil domain containing 37 (72 kDa, Protein from Bos taurus)
- Cilia and flagella associated protein 77 (32 kDa, Protein from Bos taurus)
- Ef-hand domain-containing family member c2 (85 kDa, Protein from Bos taurus)
- Cilia- and flagella- associated protein 210 (65 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 263 (44 kDa, Protein from Bos taurus)
- Adenylate kinase 7 (134 kDa, Protein from Bos taurus)
- Dnaj (hsp40) related, subfamily b, member 13 (36 kDa, Protein from Bos taurus)
- Tektin-1 (48 kDa, Protein from Bos taurus)
- Ef-hand calcium-binding domain-containing protein 3 (50 kDa, Protein from Bos taurus)
- Tubulin beta-4b chain (49 kDa, Protein from Bos taurus)
- Testis-expressed sequence 37 protein (20 kDa, Protein from Bos taurus)
- Piercer of microtubule wall 2 protein (13 kDa, Protein from Bos taurus)
- Testis expressed 47 (29 kDa, Protein from Bos taurus)
- Adenylate kinase 7 (83 kDa, Protein from Bos taurus)
- Dynein axonemal intermediate chain 1 (80 kDa, Protein from Bos taurus)
- Magnesium ion (24 Da, Ligand from Bos taurus)
- Iq motif and ubiquitin domain containing (92 kDa, Protein from Bos taurus)
- Radial spoke head protein 9 homolog (31 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 12 (454 kDa, Protein from Bos taurus)
- Nme/nm23 family member 5 (23 kDa, Protein from Bos taurus)
- Probable inactive peptidyl-prolyl cis-trans isomerase-like 6 (38 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 6 (476 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 68 (20 kDa, Protein from Bos taurus)
- Leucine-rich repeat-containing protein 23 (39 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 2 (16 kDa, Protein from Bos taurus)
- Piercer of microtubule wall 1 protein (15 kDa, Protein from Bos taurus)
- Rib43a-like with coiled-coils protein 2 (44 kDa, Protein from Bos taurus)
- Cilia and flagella associated protein 251 (83 kDa, Protein from Bos taurus)
- Spermatid-specific manchette-related protein 1 (35 kDa, Protein from Bos taurus)
- Adenylate kinase 8 (56 kDa, Protein from Bos taurus)
- Radial spoke head protein 3 homolog (68 kDa, Protein from Bos taurus)
- Serine/threonine/tyrosine interacting like 1 (35 kDa, Protein from Bos taurus)
- Cilia and flagella associated protein 44 (213 kDa, Protein from Bos taurus)
- Dynein axonemal heavy chain 6 (22 kDa, Protein from Bos taurus)
- Calmodulin 2 (16 kDa, Protein from Bos taurus)
- T-complex protein 1 subunit zeta (58 kDa, Protein from Bos taurus)
- Coiled-coil domain containing 40 (129 kDa, Protein from Bos taurus)
- Cilia- and flagella-associated protein 20 (22 kDa, Protein from Bos taurus)
- Coiled-coil domain-containing protein 39 (110 kDa, Protein from Bos taurus)
- Guanosine-5'-diphosphate (443 Da, Ligand from Bos taurus)
- Ciliary microtubule inner protein 3 (21 kDa, Protein from Bos taurus)
- Cfap97 domain containing 1 (19 kDa, Protein from Bos taurus)
- Probable inactive peptidyl-prolyl cis-trans isomerase-like 6 (34 kDa, Protein)
- Dynein regulatory complex subunit 7 (103 kDa, Protein from Bos taurus)
- Ciliary microtubule associated protein 1c (30 kDa, Protein from Bos taurus)
- Testis-expressed protein 43 (15 kDa, Protein from Bos taurus)
- Testis specific serine kinase 6 (30 kDa, Protein from Bos taurus)
PI4KA complex bound to C-terminus of EFR3A
Resolution: 3.65 Å
EM Method: Single-particle
Fitted PDBs: 9bax
Q-score: 0.327
Suresh S, Shaw AL, Pemberton JG, Scott MK, Harris NJ, Parson MAH, Jenkins ML, Rohilla P, Alvarez-Prats A, Balla T, Yip CK, Burke JE
Sci Adv (2024) 10 pp. eadp6660-eadp6660 [ DOI: doi:10.1126/sciadv.adp6660 Pubmed: 39705356 ]
- Hyccin (34 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 7b (94 kDa, Protein from Homo sapiens)
- Dimer of heterotetramers of pi4ka,ttc7b,fam126a, and efr3a c-terminus (Complex from Homo sapiens)
- Protein efr3 homolog a (14 kDa, Protein from Homo sapiens)
- Phosphatidylinositol 4-kinase alpha (237 kDa, Protein from Homo sapiens)
96nm repeat of human respiratory doublet microtubule and associated axonemal complexes
Walton T, Gui M, Velkova S, Fassad MR, Hirst RA, Haarman E, O'Callaghan C, Bottier M, Burgoyne T, Mitchison HM, Brown A
Nature (2023) 618 pp. 625-633 [ DOI: doi:10.1038/s41586-023-06140-2 Pubmed: 37258679 ]
- Dynein axonemal heavy chain 12 (454 kDa, Protein from human)
- Cilia- and flagella-associated protein 58 (103 kDa, Protein from human)
- Acta2 (42 kDa, Protein from human)
- Cilia- and flagella-associated protein 61 (141 kDa, Protein from human)
- Dynein axonemal heavy chain 3 (471 kDa, Protein from human)
- Enkurin (29 kDa, Protein from human)
- Cytochrome b5 domain-containing protein 1 (26 kDa, Protein from human)
- Dynein regulatory complex protein 11 (95 kDa, Protein from human)
- Dynein axonemal intermediate chain 2 (68 kDa, Protein from human)
- Cilia- and flagella-associated protein 20 (22 kDa, Protein from human)
- Cilia- and flagella-associated protein 44 (214 kDa, Protein from human)
- Dynein axonemal intermediate chain 4 (94 kDa, Protein from human)
- Morn repeat-containing protein 3 (27 kDa, Protein from human)
- Thioredoxin domain-containing protein 6 (36 kDa, Protein from human)
- Dynein axonemal heavy chain 2 (508 kDa, Protein from human)
- Ropporin-1-like protein (26 kDa, Protein from human)
- Parkin coregulated gene protein (29 kDa, Protein from human)
- Meiosis-specific nuclear structural protein 1 (60 kDa, Protein from human)
- Cilia- and flagella-associated protein 53 (61 kDa, Protein from human)
- Ef-hand domain-containing family member c2 (87 kDa, Protein from human)
- Dynein axonemal heavy chain 1 (488 kDa, Protein from human)
- Radial spoke head protein 3 homolog (63 kDa, Protein from human)
- Protein flattop (19 kDa, Protein from human)
- Probable inactive peptidyl-prolyl cis-trans isomerase-like 6 (35 kDa, Protein from human)
- Sperm surface protein sp17 (17 kDa, Protein from human)
- Cilia- and flagella-associated protein 276 (19 kDa, Protein from human)
- Tektin-1 (48 kDa, Protein from human)
- Cilia- and flagella-associated protein 299 (26 kDa, Protein from human)
- Dpy30 domain-containing protein 2 (20 kDa, Protein from human)
- Radial spoke head protein 9 homolog (31 kDa, Protein from human)
- Cilia- and flagella-associated protein 57 (145 kDa, Protein from human)
- Dynein axonemal heavy chain 5 (529 kDa, Protein from human)
- Dynein light chain tctex-type 1 (12 kDa, Protein from human)
- Tubulin alpha-1a chain (50 kDa, Protein from human)
- Dynein regulatory complex protein 10 (52 kDa, Protein from human)
- Cilia- and flagella- associated protein 210 (66 kDa, Protein from human)
- Piercer of microtubule wall 1 protein (15 kDa, Protein from human)
- Dynein regulatory complex subunit 7 (103 kDa, Protein from human)
- Iq and ubiquitin-like domain-containing protein (92 kDa, Protein from human)
- Coiled-coil domain-containing protein 39 (110 kDa, Protein from human)
- Protein fam166c (23 kDa, Protein from human)
- Outer dynein arm-docking complex subunit 2 (115 kDa, Protein from human)
- Dynein axonemal heavy chain 7 (461 kDa, Protein from human)
- Dynein regulatory complex subunit 5 (55 kDa, Protein from human)
- Cilia- and flagella-associated protein 77 (33 kDa, Protein from human)
- Dynein regulatory complex subunit 2 (57 kDa, Protein from human)
- Dynein regulatory complex subunit 4 (56 kDa, Protein from human)
- Coiled-coil domain-containing protein 113 (44 kDa, Protein from human)
- Cilia- and flagella-associated protein 45 (65 kDa, Protein from human)
- Cilia- and flagella-associated protein 73 (35 kDa, Protein from human)
- Tetratricopeptide repeat protein 29 (55 kDa, Protein from human)
- Dynein axonemal heavy chain 6 (476 kDa, Protein from human)
- Cilia- and flagella-associated protein 91 (90 kDa, Protein from human)
- Sperm acrosome-associated protein 9 (25 kDa, Protein from human)
- Dynein axonemal light chain 1 (21 kDa, Protein from human)
- Leucine-rich repeat-containing protein 34 (51 kDa, Protein from human)
- Outer dynein arm-docking complex subunit 4 (76 kDa, Protein from human)
- Dynein light chain roadblock-type 2 (10 kDa, Protein from human)
- Coiled-coil domain-containing protein 40 (130 kDa, Protein from human)
- Protein fam166b (30 kDa, Protein from human)
- Dynein axonemal intermediate chain 3 (103 kDa, Protein from human)
- Dynein regulatory complex protein 1 (87 kDa, Protein from human)
- Cilia- and flagella-associated protein 161 (34 kDa, Protein from human)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Dynein regulatory complex protein 9 (52 kDa, Protein from human)
- Cilia- and flagella-associated protein 144 (16 kDa, Protein from human)
- Outer dynein arm-docking complex subunit 1 (75 kDa, Protein from human)
- Unknown (6 kDa, Protein from human)
- Dynein axonemal intermediate chain 7 (83 kDa, Protein from human)
- Axonemal complex (Complex from Homo sapiens)
- Axonemal dynein light intermediate polypeptide 1 (29 kDa, Protein from human)
- Dynein axonemal intermediate chain 1 (79 kDa, Protein from human)
- Dnaj homolog subfamily b member 13 (36 kDa, Protein from human)
- Coiled-coil domain-containing protein 96 (62 kDa, Protein from human)
- Magnesium ion (24 Da, Ligand)
- Tektin-2 (49 kDa, Protein from human)
- Dynein regulatory complex protein 8 (29 kDa, Protein from human)
- Cilia- and flagella-associated protein 43 (192 kDa, Protein from human)
- Radial spoke head 14 homolog (38 kDa, Protein from human)
- Radial spoke head protein 4 homolog a (80 kDa, Protein from human)
- Uncharacterized protein cfap68 (17 kDa, Protein from human)
- Dynein regulatory complex subunit 3 (61 kDa, Protein from human)
- Cilia- and flagella-associated protein 100 (71 kDa, Protein from human)
- Calmodulin-1 (16 kDa, Protein from human)
- Uncharacterized protein cfap90 (17 kDa, Protein from human)
- Nucleoside diphosphate kinase homolog 5 (24 kDa, Protein from human)
- Dynll1 (10 kDa, Protein from human)
- Rib43a-like with coiled-coils protein 2 (45 kDa, Protein from human)
- Zinc finger mynd domain-containing protein 12 (41 kDa, Protein from human)
- Outer dynein arm-docking complex subunit 3 (69 kDa, Protein from human)
- Rib43a-like with coiled-coils protein 1 (44 kDa, Protein from human)
- Cilia- and flagella-associated protein 95 (26 kDa, Protein from human)
- Centrin-2 (19 kDa, Protein from human)
- Piercer of microtubule wall 2 protein (13 kDa, Protein from human)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Cilia- and flagella-associated protein 107 (23 kDa, Protein from human)
- Cilia- and flagella-associated protein 251 (130 kDa, Protein from human)
- Dynein light chain roadblock-type 1 (10 kDa, Protein from human)
- Ef-hand domain-containing protein 1 (74 kDa, Protein from human)
- Calaxin (24 kDa, Protein from human)
- Nucleoside diphosphate kinase 7 (42 kDa, Protein from human)
- Radial spoke head 1 homolog (35 kDa, Protein from human)
- Dynein light chain tctex-type protein 2b (16 kDa, Protein from human)
- Cilia- and flagella-associated protein 141 (12 kDa, Protein from human)
- Tubulin beta-4b chain (49 kDa, Protein from human)
- Sperm-associated antigen 8 (51 kDa, Protein from human)
- Cilia- and flagella-associated protein 52 (68 kDa, Protein from human)
- Dynein axonemal heavy chain 9 (512 kDa, Protein from human)
- Ef-hand domain-containing family member b (93 kDa, Protein from human)
- Dynein axonemal heavy chain 10 (529 kDa, Protein from human)
Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7qws
Q-score: -0.054
Jomaa A, Gamerdinger M, Hsieh HH, Wallisch A, Chandrasekaran V, Ulusoy Z, Scaiola A, Hegde RS, Shan SO, Ban N, Deuerling E
Science (2022) 375 pp. 839-844 [ DOI: doi:10.1126/science.abl6459 Pubmed: 35201867 ]
- Ribosomal protein l13a (56 kDa, Protein from Oryctolagus cuniculus)
- Nascent chain tubulin beta (Complex from Homo sapiens)
- 60s ribosomal protein l4 (46 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l19 (23 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l34 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l10 (24 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l8 (26 kDa, Protein from Oryctolagus cuniculus)
- Nascent polypeptide-associated complex subunit alpha (23 kDa, Protein from Oryctolagus cuniculus)
- Ul30 (26 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l27 (15 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l39 (6 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l22 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l11 (20 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35a (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l15 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l37 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l30 (12 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l13 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l18_c domain-containing protein (34 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l3 (46 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l32 (18 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l17 (17 kDa, Protein from Oryctolagus cuniculus)
- 28s rrna (1 MDa, RNA from Oryctolagus cuniculus)
- 60s ribosomal protein l29 (24 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l24 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l7a (36 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l18 (21 kDa, Protein from Oryctolagus cuniculus)
- 5s rrna (38 kDa, RNA from Oryctolagus cuniculus)
- Ribosomal protein l26 (17 kDa, Protein from Oryctolagus cuniculus)
- Tetratricopeptide repeat protein 5 (48 kDa, Protein from Homo sapiens)
- 60s ribosomal protein l27a (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l18a (20 kDa, Protein from Oryctolagus cuniculus)
- Ribosome (Complex from Oryctolagus cuniculus)
- Ribosomal protein l38 (8 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l35 (14 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l28 (15 kDa, Protein from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l41 (3 kDa, Protein from Oryctolagus cuniculus)
- El42 (16 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal_l23en domain-containing protein (17 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l40 (14 kDa, Protein from Oryctolagus cuniculus)
- El43 (10 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l21 (18 kDa, Protein from Oryctolagus cuniculus)
- Ribosomal protein l23 (14 kDa, Protein from Oryctolagus cuniculus)
- 5.8s rrna (50 kDa, RNA from Oryctolagus cuniculus)
- Zinc ion (65 Da, Ligand)
- Ribosome translating beta-tubulin in complex with ttc5 and nac (Complex)
- 60s ribosomal protein l14 (23 kDa, Protein from Oryctolagus cuniculus)
- Tetratricopeptide repeat protein 5 (Complex from Homo sapiens)
- 60s ribosomal protein l9 (21 kDa, Protein from Oryctolagus cuniculus)
- Nascent chain tubulin beta (2 kDa, Protein from Homo sapiens)
- Ribosomal protein l31 (14 kDa, Protein from Oryctolagus cuniculus)
- Transcription factor btf3 (17 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l36 (11 kDa, Protein from Oryctolagus cuniculus)
- 60s ribosomal protein l6 (33 kDa, Protein from Oryctolagus cuniculus)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7qdy
Q-score: 0.483
Kogel A, Keidel A, Bonneau F, Schafer IB, Conti E
Mol Cell (2022) 82 pp. 756- [ DOI: doi:10.1016/j.molcel.2022.01.009 Pubmed: 35120588 ]
- Rna (5'-r(p*up*up*up*up*up*u)-3') (7 kDa, RNA from Homo sapiens)
- H.s. ski complex bound to rna (380 kDa, Complex from Homo sapiens)
- Wd repeat-containing protein 61 (33 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 37 (178 kDa, Protein from Homo sapiens)
- Helicase ski2w (137 kDa, Protein from Homo sapiens)
80S-bound human SKI complex in the closed state
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7qdz
Q-score: 0.396
Kogel A, Keidel A, Bonneau F, Schafer IB, Conti E
Mol Cell (2022) 82 pp. 756- [ DOI: doi:10.1016/j.molcel.2022.01.009 Pubmed: 35120588 ]
- H.s. ski complex bound to the ribosome in closed state (380 kDa, Complex from Homo sapiens)
- Rna (5'-r(p*up*up*up*up*up*u)-3') (1 kDa, RNA from Homo sapiens)
- Wd repeat-containing protein 61 (33 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 37 (178 kDa, Protein from Homo sapiens)
- Helicase ski2w (137 kDa, Protein from Homo sapiens)
Apo human SKI complex in the closed state
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7qdr
Q-score: 0.463
Kogel A, Keidel A, Bonneau F, Schafer IB, Conti E
Mol Cell (2022) 82 pp. 756- [ DOI: doi:10.1016/j.molcel.2022.01.009 Pubmed: 35120588 ]
- H.s. ski complex in the apo closed state (380 kDa, Complex from Homo sapiens)
- Helicase ski2w (137 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 61 (33 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 37 (178 kDa, Protein from Homo sapiens)
Apo human SKI complex in the open state
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7qds
Q-score: 0.447
Kogel A, Keidel A, Bonneau F, Schafer IB, Conti E
Mol Cell (2022) 82 pp. 756- [ DOI: doi:10.1016/j.molcel.2022.01.009 Pubmed: 35120588 ]
- Helicase ski2w (137 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 61 (33 kDa, Protein from Homo sapiens)
- H.s. ski complex in the apo open state (380 kDa, Complex from Homo sapiens)
- Tetratricopeptide repeat protein 37 (178 kDa, Protein from Homo sapiens)
Trypanosoma brucei mitochondrial ribosome large subunit assembly intermediate
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7aoi
Q-score: 0.486
Tobiasson V, Gahura O, Aibara S, Baradaran R, Zikova A, Amunts A
EMBO J (2021) 40 pp. e106292-e106292 [ Pubmed: 33576519 DOI: doi:10.15252/embj.2020106292 ]
- Spou rrna methylase family (48 kDa, Protein from Trypanosoma brucei)
- Ml95 (16 kDa, Protein from Trypanosoma brucei)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Dead-box helicase, putative,mt-laf2 (76 kDa, Protein from Trypanosoma brucei)
- Bl28m (25 kDa, Protein from Trypanosoma brucei)
- Ml94 (11 kDa, Protein from Trypanosoma brucei)
- Mitochondrial ribosomal protein l51 / s25 / ci-b8 domain containing protein (22 kDa, Protein from Trypanosoma brucei)
- Ribosomal protein l4/l1 family (51 kDa, Protein from Trypanosoma brucei)
- Ml86 (19 kDa, Protein from Trypanosoma brucei)
- Bl19m (16 kDa, Protein from Trypanosoma brucei)
- Mt-laf7,mt-laf7 (18 kDa, Protein from Trypanosoma brucei)
- Rna uridylyltransferase (17 kDa, Protein from Trypanosoma brucei)
- Ml70 (47 kDa, Protein from Trypanosoma brucei)
- Unk10 (1 kDa, Protein from Trypanosoma brucei)
- Lim domain containing protein,ml90 (13 kDa, Protein from Trypanosoma brucei)
- Ml81 (25 kDa, Protein from Trypanosoma brucei)
- Zinc ion (65 Da, Ligand)
- Ml67 (89 kDa, Protein from Trypanosoma brucei)
- Ml101 (21 kDa, Protein from Trypanosoma brucei)
- Ribosomal protein l22p/l17e (31 kDa, Protein from Trypanosoma brucei)
- Ml89 (22 kDa, Protein from Trypanosoma brucei)
- Complex1-lyr-like (10 kDa, Protein from Trypanosoma brucei)
- Ul30m (17 kDa, Protein from Trypanosoma brucei)
- Ml76 (18 kDa, Protein from Trypanosoma brucei)
- Ribosomal_l9 domain-containing protein (25 kDa, Protein from Trypanosoma brucei)
- Mt-laf12 (70 kDa, Protein from Trypanosoma brucei)
- 50s ribosomal protein l17 (30 kDa, Protein from Trypanosoma brucei)
- Bl33m (17 kDa, Protein from Trypanosoma brucei)
- Ml74 (25 kDa, Protein from Trypanosoma brucei)
- Unk7 (1 kDa, Protein from Trypanosoma brucei)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Unk8 (1 kDa, Protein from Trypanosoma brucei)
- Unk2 (657 Da, Protein from Trypanosoma brucei)
- Mt-lsu rrna (242 kDa, RNA from Trypanosoma brucei)
- Mt-laf4 (69 kDa, Protein from Trypanosoma brucei)
- Pseudouridylate synthase, putative (42 kDa, Protein from Trypanosoma brucei)
- Gtp-binding protein, putative,mt-enga (60 kDa, Protein from Trypanosoma brucei)
- Ml71 (49 kDa, Protein from Trypanosoma brucei)
- Mt-laf14 (78 kDa, Protein from Trypanosoma brucei)
- Unk4 (586 Da, Protein from Trypanosoma brucei)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Ribosomal protein l11,ul11m (29 kDa, Protein from Trypanosoma brucei)
- Unk3 (1 kDa, Protein from Trypanosoma brucei)
- Ml68,ml68,ml68 (40 kDa, Protein from Trypanosoma brucei)
- Ml78 (31 kDa, Protein from Trypanosoma brucei)
- Ml49 (20 kDa, Protein from Trypanosoma brucei)
- Ribosomal protein l23 (19 kDa, Protein from Trypanosoma brucei)
- Unk9 (2 kDa, Protein from Trypanosoma brucei)
- Ml52 (14 kDa, Protein from Trypanosoma brucei)
- Peptidyl-prolyl cis-trans isomerase (20 kDa, Protein from Trypanosoma brucei)
- Ml93 (16 kDa, Protein from Trypanosoma brucei)
- Ml85 (16 kDa, Protein from Trypanosoma brucei)
- Ml64,ml64 (23 kDa, Protein from Trypanosoma brucei)
- Unk1 (3 kDa, Protein from Trypanosoma brucei)
- Ribosomal protein l3 mitochondrial, putative (42 kDa, Protein from Trypanosoma brucei)
- Ml98 (10 kDa, Protein from Trypanosoma brucei)
- Peptidyl-prolyl cis-trans isomerase (20 kDa, Protein from Trypanosoma brucei)
- Ml87 (9 kDa, Protein from Trypanosoma brucei)
- Acyl carrier protein (9 kDa, Protein from Trypanosoma brucei)
- Trypanosoma brucei mitochondrial ribosome large subunit assembly intermediate (2 MDa, Complex from Trypanosoma brucei)
- Unk11 (3 kDa, Protein from Trypanosoma brucei)
- Mt-laf15_1 (21 kDa, Protein from Trypanosoma brucei)
- Mt-laf8 (58 kDa, Protein from Trypanosoma brucei)
- Ul29m (53 kDa, Protein from Trypanosoma brucei)
- Ml100,ml100 (10 kDa, Protein from Trypanosoma brucei)
- Unk5 (870 Da, Protein from Trypanosoma brucei)
- Ul24m (39 kDa, Protein from Trypanosoma brucei)
- Ml41 (13 kDa, Protein from Trypanosoma brucei)
- Magnesium ion (24 Da, Ligand)
- Tetratricopeptide repeat (48 kDa, Protein from Trypanosoma brucei)
- Lipase (class 3) (18 kDa, Protein from Trypanosoma brucei)
- Gtp-binding protein (33 kDa, Protein from Trypanosoma brucei)
- Ml63 (17 kDa, Protein from Trypanosoma brucei)
- Mitochondrial rna binding complex 1 subunit (37 kDa, Protein from Trypanosoma brucei)
- Ml99 (9 kDa, Protein from Trypanosoma brucei)
- Bl32m (6 kDa, Protein from Trypanosoma brucei)
- Bl20m (22 kDa, Protein from Trypanosoma brucei)
- Ribosomal protein l21 (20 kDa, Protein from Trypanosoma brucei)
- Ml53 (33 kDa, Protein from Trypanosoma brucei)
- Ribosomal_l18e/l15p domain-containing protein (41 kDa, Protein from Trypanosoma brucei)
- Unk6/mt-laf15_2 (9 kDa, Protein from Trypanosoma brucei)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- 50s ribosomal protein l13 (20 kDa, Protein from Trypanosoma brucei)
- Ml42 (15 kDa, Protein from Trypanosoma brucei)
- Ml84 (23 kDa, Protein from Trypanosoma brucei)
- Ml80 (25 kDa, Protein from Trypanosoma brucei)
- 50s ribosomal protein l14 (19 kDa, Protein from Trypanosoma brucei)
- Chaperone protein dnaj, putative,ml77,chaperone protein dnaj, putative (30 kDa, Protein from Trypanosoma brucei)
- Mt-laf19 (11 kDa, Protein from Trypanosoma brucei)
State A of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6yxx
Q-score: 0.389
Jaskolowski M, Ramrath DJF, Bieri P, Niemann M, Mattei S, Calderaro S, Leibundgut M, Horn EK, Boehringer D, Schneider A, Ban N
Mol Cell (2020) 79 pp. 629-644.e4 [ DOI: doi:10.1016/j.molcel.2020.06.030 Pubmed: 32679035 ]
- Kripp3 (58 kDa, Protein from Trypanosoma brucei brucei)
- Ml84 (24 kDa, Protein from Trypanosoma brucei brucei)
- Ul22m (32 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf25 (32 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf12 (77 kDa, Protein from Trypanosoma brucei brucei)
- Kripp9 (89 kDa, Protein from Trypanosoma brucei brucei)
- Ml80 (34 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal_l18e/l15p domain-containing protein (43 kDa, Protein from Trypanosoma brucei brucei)
- L51_s25_ci-b8 domain-containing protein (31 kDa, Protein from Trypanosoma brucei brucei)
- Ml52 (167 kDa, Protein from Trypanosoma brucei brucei)
- Dead-box helicase, putative (85 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf27 (11 kDa, Protein from Trypanosoma brucei brucei)
- Water (18 Da, Ligand)
- State b of the trypanosoma brucei mitoribosomal large subunit assembly intermediate (Complex from Trypanosoma brucei brucei)
- Ml42 (21 kDa, Protein from Trypanosoma brucei brucei)
- Ml95 (17 kDa, Protein from Trypanosoma brucei brucei)
- Ml53 (35 kDa, Protein from Trypanosoma brucei brucei)
- Bl35m (21 kDa, Protein from Trypanosoma brucei brucei)
- Mt-enga (65 kDa, Protein from Trypanosoma brucei brucei)
- Unk (698 Da, Protein from Trypanosoma brucei brucei)
- Zinc ion (65 Da, Ligand)
- Ml85 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ml64 (28 kDa, Protein from Trypanosoma brucei brucei)
- Ml41 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ul24m (43 kDa, Protein from Trypanosoma brucei brucei)
- Unk (20 kDa, Protein from Trypanosoma brucei brucei)
- Ml81 (29 kDa, Protein from Trypanosoma brucei brucei)
- Ml68 (62 kDa, Protein from Trypanosoma brucei brucei)
- Ml93 (18 kDa, Protein from Trypanosoma brucei brucei)
- Peptidyl-prolyl cis-trans isomerase (20 kDa, Protein from Trypanosoma brucei brucei)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Gtp-binding protein, putative (50 kDa, Protein from Trypanosoma brucei brucei)
- Unk (7 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l11, putative (40 kDa, Protein from Trypanosoma brucei brucei)
- Unk (2 kDa, Protein from Trypanosoma brucei brucei)
- Unk (869 Da, Protein from Trypanosoma brucei brucei)
- Unk (2 kDa, Protein from Trypanosoma brucei brucei)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Mt-laf14 (82 kDa, Protein from Trypanosoma brucei brucei)
- S-(2-{[n-(2-hydroxy-4-{[hydroxy(oxido)phosphino]oxy}-3,3-dimethylbutanoyl)-beta-alanyl]amino}ethyl) decanethioate (496 Da, Ligand)
- Ml98 (12 kDa, Protein from Trypanosoma brucei brucei)
- Ml70 (62 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf29 (38 kDa, Protein from Trypanosoma brucei brucei)
- Ml74 (39 kDa, Protein from Trypanosoma brucei brucei)
- Unk (2 kDa, Protein from Trypanosoma brucei brucei)
- Ml71 (50 kDa, Protein from Trypanosoma brucei brucei)
- 50s ribosomal protein l17, putative (35 kDa, Protein from Trypanosoma brucei brucei)
- Spou_methylase domain-containing protein (67 kDa, Protein from Trypanosoma brucei brucei)
- Ml86 (22 kDa, Protein from Trypanosoma brucei brucei)
- Acyl carrier protein (16 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf15a (34 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l4/l1 family, putative (53 kDa, Protein from Trypanosoma brucei brucei)
- Ul23m (28 kDa, Protein from Trypanosoma brucei brucei)
- Ml78 (35 kDa, Protein from Trypanosoma brucei brucei)
- Spou_methylase domain-containing protein (40 kDa, Protein from Trypanosoma brucei brucei)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l13, putative (24 kDa, Protein from Trypanosoma brucei brucei)
- Bl19m (16 kDa, Protein from Trypanosoma brucei brucei)
- Ml67 (93 kDa, Protein from Trypanosoma brucei brucei)
- Ml76 (39 kDa, Protein from Trypanosoma brucei brucei)
- Ml87 (22 kDa, Protein from Trypanosoma brucei brucei)
- Sodium ion (22 Da, Ligand)
- 12s ribosomal rna (365 kDa, RNA from Trypanosoma brucei brucei)
- Ml89 (22 kDa, Protein from Trypanosoma brucei brucei)
- Bl32m (9 kDa, Protein from Trypanosoma brucei brucei)
- Chaperone protein dnaj, putative (43 kDa, Protein from Trypanosoma brucei brucei)
- Ml94 (17 kDa, Protein from Trypanosoma brucei brucei)
- Peptidyl-prolyl cis-trans isomerase (25 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf7 (18 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf24 (49 kDa, Protein from Trypanosoma brucei brucei)
- Ml49 (24 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf4 (69 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal_l9 domain-containing protein (30 kDa, Protein from Trypanosoma brucei brucei)
- Bl20m (24 kDa, Protein from Trypanosoma brucei brucei)
- Ml75 (39 kDa, Protein from Trypanosoma brucei brucei)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tetratricopeptide repeat (49 kDa, Protein from Trypanosoma brucei brucei)
- Ul29m (54 kDa, Protein from Trypanosoma brucei brucei)
- Lipase (class 3) (58 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf19 (12 kDa, Protein from Trypanosoma brucei brucei)
- Bl21m (20 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf21 (56 kDa, Protein from Trypanosoma brucei brucei)
- Duf4379 domain-containing protein (63 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf8 (68 kDa, Protein from Trypanosoma brucei brucei)
- Ml63 (18 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf23 (63 kDa, Protein from Trypanosoma brucei brucei)
- Bl28m (28 kDa, Protein from Trypanosoma brucei brucei)
- Pseudouridylate synthase, putative (46 kDa, Protein from Trypanosoma brucei brucei)
- Ul30m (25 kDa, Protein from Trypanosoma brucei brucei)
- Unk (6 kDa, Protein from Trypanosoma brucei brucei)
- Ribosomal protein l3 mitochondrial, putative (55 kDa, Protein from Trypanosoma brucei brucei)
- Ml88 (22 kDa, Protein from Trypanosoma brucei brucei)
- Unk (1 kDa, Protein from Trypanosoma brucei brucei)