PI4KA complex bound to C-terminus of EFR3A
Resolution: 3.65 Å
EM Method: Single-particle
Fitted PDBs: 9bax
Q-score: 0.327
Suresh S, Shaw AL, Pemberton JG, Scott MK, Harris NJ, Parson MAH, Jenkins ML, Rohilla P, Alvarez-Prats A, Balla T, Yip CK, Burke JE
Sci Adv (2024) 10 pp. eadp6660-eadp6660 [ DOI: doi:10.1126/sciadv.adp6660 Pubmed: 39705356 ]
- Hyccin (34 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 7b (94 kDa, Protein from Homo sapiens)
- Dimer of heterotetramers of pi4ka,ttc7b,fam126a, and efr3a c-terminus (Complex from Homo sapiens)
- Protein efr3 homolog a (14 kDa, Protein from Homo sapiens)
- Phosphatidylinositol 4-kinase alpha (237 kDa, Protein from Homo sapiens)
Human IFT-A complex structures provide molecular insights into ciliary transport
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8fgw
Q-score: 0.406
Jiang M, Palicharla VR, Miller D, Hwang SH, Zhu H, Hixson P, Mukhopadhyay S, Sun J
Cell Res (2023) 33 pp. 288-298 [ DOI: doi:10.1038/s41422-023-00778-3 Pubmed: 36775821 ]
- Zinc ion (65 Da, Ligand)
- Wd repeat-containing protein 19 (151 kDa, Protein from Homo sapiens)
- Intraflagellar transport complex a (ift-a) (Complex from Homo sapiens)
- Intraflagellar transport protein 122 homolog (141 kDa, Protein from Homo sapiens)
- Intraflagellar transport protein 140 homolog (165 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 21b (151 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 35 (133 kDa, Protein from Homo sapiens)
- Intraflagellar transport protein 43 homolog (23 kDa, Protein from Homo sapiens)
Structure of the IFT-A complex; IFT-A2 module
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8bbe
Q-score: 0.306
Hesketh SJ, Mukhopadhyay AG, Nakamura D, Toropova K, Roberts AJ
Cell (2022) 185 pp. 4971- [ DOI: doi:10.1016/j.cell.2022.11.010 Pubmed: 36462505 ]
- Intraflagellar transport protein 43 homolog (23 kDa, Protein from Homo sapiens)
- Ift-a complex; ift-a2 module (Complex from Homo sapiens)
- Intraflagellar transport protein 122 homolog (141 kDa, Protein from Homo sapiens)
- Snap-tag,tetratricopeptide repeat protein 21b (170 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 35 (134 kDa, Protein from Homo sapiens)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7qdy
Q-score: 0.483
Kogel A, Keidel A, Bonneau F, Schafer IB, Conti E
Mol Cell (2022) 82 pp. 756- [ DOI: doi:10.1016/j.molcel.2022.01.009 Pubmed: 35120588 ]
- Rna (5'-r(p*up*up*up*up*up*u)-3') (7 kDa, RNA from Homo sapiens)
- H.s. ski complex bound to rna (380 kDa, Complex from Homo sapiens)
- Wd repeat-containing protein 61 (33 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 37 (178 kDa, Protein from Homo sapiens)
- Helicase ski2w (137 kDa, Protein from Homo sapiens)
80S-bound human SKI complex in the closed state
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7qdz
Q-score: 0.396
Kogel A, Keidel A, Bonneau F, Schafer IB, Conti E
Mol Cell (2022) 82 pp. 756- [ DOI: doi:10.1016/j.molcel.2022.01.009 Pubmed: 35120588 ]
- H.s. ski complex bound to the ribosome in closed state (380 kDa, Complex from Homo sapiens)
- Rna (5'-r(p*up*up*up*up*up*u)-3') (1 kDa, RNA from Homo sapiens)
- Wd repeat-containing protein 61 (33 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 37 (178 kDa, Protein from Homo sapiens)
- Helicase ski2w (137 kDa, Protein from Homo sapiens)
Apo human SKI complex in the closed state
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7qdr
Q-score: 0.463
Kogel A, Keidel A, Bonneau F, Schafer IB, Conti E
Mol Cell (2022) 82 pp. 756- [ DOI: doi:10.1016/j.molcel.2022.01.009 Pubmed: 35120588 ]
- H.s. ski complex in the apo closed state (380 kDa, Complex from Homo sapiens)
- Helicase ski2w (137 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 61 (33 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 37 (178 kDa, Protein from Homo sapiens)
Apo human SKI complex in the open state
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7qds
Q-score: 0.447
Kogel A, Keidel A, Bonneau F, Schafer IB, Conti E
Mol Cell (2022) 82 pp. 756- [ DOI: doi:10.1016/j.molcel.2022.01.009 Pubmed: 35120588 ]
- Helicase ski2w (137 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 61 (33 kDa, Protein from Homo sapiens)
- H.s. ski complex in the apo open state (380 kDa, Complex from Homo sapiens)
- Tetratricopeptide repeat protein 37 (178 kDa, Protein from Homo sapiens)
Human PI4KIIIa lipid kinase complex
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 6bq1
Q-score: 0.341
Lees JA, Zhang Y, Oh MS, Schauder CM, Yu X, Baskin JM, Dobbs K, Notarangelo LD, De Camilli P, Walz T, Reinisch KM
PNAS (2017) 114 pp. 13720-13725 [ DOI: doi:10.1073/pnas.1718471115 Pubmed: 29229838 ]
- Phosphatidylinositol 4-kinase iii alpha (pi4ka) (173 kDa, Protein from Homo sapiens)
- Human phosphatidylinositol 4-kinase iii alpha complex (700 kDa, Complex from Homo sapiens)
- 5-{2-amino-1-[4-(morpholin-4-yl)phenyl]-1h-benzimidazol-6-yl}-n-(2-fluorophenyl)-2-methoxypyridine-3-sulfonamide (574 Da, Ligand)
- Protein fam126a (32 kDa, Protein from Homo sapiens)
- Tetratricopeptide repeat protein 7b (96 kDa, Protein from Homo sapiens)
- Phosphatidylinositol 4-kinase iii alpha (pi4ka) (173 kDa, Protein from Homo sapiens)