Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8vsc
Q-score: 0.483
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200- [ DOI: doi:10.1016/j.cell.2024.08.036 Pubmed: 39288764 ]
- Transforming growth factor beta activator lrrc32 (66 kDa, Protein from Homo sapiens)
- Transforming growth factor beta-1 proprotein (44 kDa, Protein from Homo sapiens)
- L-tgf-b1/garp complex (180 kDa, Complex from Homo sapiens)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8vsd
Q-score: 0.508
Jin M, Seed RI, Cai G, Shing T, Wang L, Ito S, Cormier A, Wankowicz SA, Jespersen JM, Baron JL, Carey ND, Campbell MG, Yu Z, Tang PK, Cossio P, Wen W, Lou J, Marks J, Nishimura SL, Cheng Y
Cell (2024) 187 pp. 6200- [ DOI: doi:10.1016/j.cell.2024.08.036 Pubmed: 39288764 ]
- Integrin beta-8 (39 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Avb8 complex (Complex from Homo sapiens)
- Transforming growth factor beta-1 proprotein (41 kDa, Protein from Homo sapiens)
- Integrin alpha-v heavy chain (65 kDa, Protein from Homo sapiens)
- L-tgf-b1/garp complex (Complex from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Avb8/l-tgf-b1/garp complex (180 kDa, Complex from Homo sapiens)
- Transforming growth factor beta activator lrrc32 (61 kDa, Protein from Homo sapiens)
Human L-TGF-beta1 in complex with the anchor protein LRRC33
Resolution: 4.01 Å
EM Method: Single-particle
Fitted PDBs: 7y1r
Q-score: 0.187
Duan Z, Lin X, Wang L, Zhen Q, Jiang Y, Chen C, Yang J, Lee CH, Qin Y, Li Y, Zhao B, Wang J, Zhang Z
Nat Commun (2022) 13 pp. 4988-4988 [ Pubmed: 36008481 DOI: doi:10.1038/s41467-022-32655-9 ]
- L-tgf-beta1 in complex with its anchor protein lrrc33 (150 kDa, Complex from Homo sapiens)
- Transforming growth factor beta activator lrrc33 (72 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Transforming growth factor beta-1 proprotein (43 kDa, Protein from Homo sapiens)
Complex of integrin alphaV/beta8 and L-TGF-beta1 at a ratio of 1:2
Resolution: 3.24 Å
EM Method: Single-particle
Fitted PDBs: 7y1t
Q-score: 0.428
Duan Z, Lin X, Wang L, Zhen Q, Jiang Y, Chen C, Yang J, Lee CH, Qin Y, Li Y, Zhao B, Wang J, Zhang Z
Nat Commun (2022) 13 pp. 4988-4988 [ Pubmed: 36008481 DOI: doi:10.1038/s41467-022-32655-9 ]
- Integrin alpha-v (69 kDa, Protein from Homo sapiens)
- Transforming growth factor beta-1 proprotein (43 kDa, Protein from Homo sapiens)
- Complex of integrin alphav/beta8 and l-tgf-beta1 at a ratio of 1:2 (210 kDa, Complex from Homo sapiens)
- Manganese (ii) ion (54 Da, Ligand)
- Integrin beta-8 (53 kDa, Protein from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6uja
Q-score: 0.462
Campbell MG, Cormier A, Ito S, Seed RI, Bondesson AJ, Lou J, Marks JD, Baron JL, Cheng Y, Nishimura SL
Cell (2020) 180 pp. 490- [ DOI: doi:10.1016/j.cell.2019.12.030 Pubmed: 31955848 ]
- Magnesium ion (24 Da, Ligand)
- Integrin alpha-v (112 kDa, Protein from Homo sapiens)
- Transforming growth factor beta-1 proprotein (41 kDa, Protein from Sus scrofa)
- Binary complex of integrin alpha-v beta-8 with latent tgf-beta-1 (l-tgf-b1) (260 kDa, Complex)
- Calcium ion (40 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Integrin beta-8 (81 kDa, Protein from Homo sapiens)
- Alpha-v beta-8 integrin (Complex from Homo sapiens)
- Transforming growth factor beta-1 proprotein (Complex from Sus scrofa)
Campbell MG, Cormier A, Ito S, Seed RI, Bondesson AJ, Lou J, Marks JD, Baron JL, Cheng Y, Nishimura SL
Cell (2020) 180 pp. 490-501.e16 [ DOI: doi:10.1016/j.cell.2019.12.030 Pubmed: 31955848 ]
Campbell MG, Cormier A, Ito S, Seed RI, Bondesson AJ, Lou J, Marks JD, Baron JL, Cheng Y, Nishimura SL
Cell (2020) 180 pp. 490-501.e16 [ DOI: doi:10.1016/j.cell.2019.12.030 Pubmed: 31955848 ]
Campbell MG, Cormier A, Ito S, Seed RI, Bondesson AJ, Lou J, Marks JD, Baron JL, Cheng Y, Nishimura SL
Cell (2020) 180 pp. 490-501.e16 [ DOI: doi:10.1016/j.cell.2019.12.030 Pubmed: 31955848 ]
Campbell MG, Cormier A, Ito S, Seed RI, Bondesson AJ, Lou J, Marks JD, Baron JL, Cheng Y, Nishimura SL
Cell (2020) 180 pp. 490-501.e16 [ DOI: doi:10.1016/j.cell.2019.12.030 Pubmed: 31955848 ]
Campbell MG, Cormier A, Ito S, Seed RI, Bondesson AJ, Lou J, Marks JD, Baron JL, Cheng Y, Nishimura SL
Cell (2020) 180 pp. 490-501.e16 [ DOI: doi:10.1016/j.cell.2019.12.030 Pubmed: 31955848 ]