The Type 9 Secretion System in vitro assembled, RemA-CTD substrate bound complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8gl6
Q-score: 0.524
Lauber F, Deme JC, Liu X, Kjaer A, Miller HL, Alcock F, Lea SM, Berks BC
Nat Microbiol (2024) [ ]
- Lauryl maltose neopentyl glycol (1 kDa, Ligand)
- Protein involved in gliding motility spra (270 kDa, Protein from Flavobacterium johnsoniae)
- Rema (154 kDa, Protein from Flavobacterium johnsoniae)
- Peptidyl-prolyl cis-trans isomerase (19 kDa, Protein from Flavobacterium johnsoniae)
- Type ix secretion system protein porv domain-containing protein (44 kDa, Protein from Flavobacterium johnsoniae)
- Type 9 secretion system extended translocon (Complex from Flavobacterium johnsoniae UW101)
The Type 9 Secretion System in vitro assembled, FspA-CTD substrate bound complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8glj
Q-score: 0.529
Lauber F, Deme JC, Liu X, Kjaer A, Miller HL, Alcock F, Lea SM, Berks BC
Nat Microbiol (2024) [ ]
- Type ix secretion system protein porv domain-containing protein (44 kDa, Protein from Flavobacterium johnsoniae)
- Peptidyl-prolyl cis-trans isomerase (19 kDa, Protein from Flavobacterium johnsoniae)
- Por secretion system c-terminal sorting domain-containing protein (8 kDa, Protein from Flavobacterium johnsoniae)
- Lauryl maltose neopentyl glycol (1 kDa, Ligand)
- Type 9 secretion system extended translocon (Complex from Flavobacterium johnsoniae UW101)
- Protein involved in gliding motility spra (270 kDa, Protein from Flavobacterium johnsoniae)
Subtomogram average of the human Sec61-TRAP-OSTA-translocon
Resolution: 7.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8b6l
Q-score: 0.133
Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Grollers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Forster F
Nature (2023) 614 pp. 160-167 [ DOI: doi:10.1038/s41586-022-05638-5 Pubmed: 36697828 ]
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 (4 kDa, Protein from Homo sapiens)
- Transmembrane protein 258 (9 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (69 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a (80 kDa, Protein from Homo sapiens)
- Protein transport protein sec61 subunit beta (9 kDa, Protein from Homo sapiens)
- Protein transport protein sec61 subunit alpha isoform 1 (52 kDa, Protein from Homo sapiens)
- Translocon-associated protein subunit beta (20 kDa, Protein from Homo sapiens)
- Signal peptide mix (1 kDa, Protein from Homo sapiens)
- Translocon-associated protein subunit gamma (21 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1 (12 kDa, Protein from Homo sapiens)
- Translocon-associated protein subunit alpha (32 kDa, Protein from Homo sapiens)
- Protein transport protein sec61 subunit gamma (7 kDa, Protein from Homo sapiens)
- Translocon-associated protein subunit delta (19 kDa, Protein from Homo sapiens)
- Oligosaccharyltransferase complex subunit ostc (16 kDa, Protein from Homo sapiens)
- Sec61-trap-osta translocon complex (Cellular component from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit (50 kDa, Protein from Homo sapiens)
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (68 kDa, Protein from Homo sapiens)
ColicinE9 intact translocation complex
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 7nsu
Q-score: 0.046
Francis MR, Webby MN, Housden NG, Kaminska R, Elliston E, Chinthammit B, Lukoyanova N, Kleanthous C
EMBO J (2021) 40 pp. e108610-e108610 [ DOI: doi:10.15252/embj.2021108610 Pubmed: 34515361 ]
- Colicine9 intact translocon complex (256 kDa, Complex from Escherichia coli K-12)
- Outer membrane protein f (37 kDa, Protein from Escherichia coli (strain K12))
- Vitamin b12 transporter btub (66 kDa, Protein from Escherichia coli (strain K12))
- Tol-pal system protein tolb (46 kDa, Protein from Escherichia coli (strain K12))
- Colicin-e9 (61 kDa, Protein from Escherichia coli)
A complete structure of the ESX-3 translocon complex
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6umm
Q-score: 0.266
Poweleit N, Czudnochowski N, Nakagawa R, Murphy K, Sassetti C, Rosenberg OS
To Be Published
- Esx-3 secretion system atpase eccb3 (9 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Esx-3 secretion system protein eccd3 (48 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Esx-3 translocon complex (660 kDa, Complex from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Esx-3 secretion system protein ecce3 (30 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
- Esx-3 secretion system protein eccc3 (44 kDa, Protein from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))