Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(2-fold)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0k
Q-score: 0.436
To Be Published
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(2-fold) (Complex from Semliki Forest virus)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Very low-density lipoprotein receptor (4 kDa, Protein from Homo sapiens)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(3-fold)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0l
Q-score: 0.455
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(3-fold) (Complex from Semliki Forest virus)
- Calcium ion (40 Da, Ligand)
- Pike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- Pike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Very low-density lipoprotein receptor (4 kDa, Protein from Homo sapiens)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(5-fold)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8x0m
Q-score: 0.405
To Be Published
- Spike glycoprotein e1 (47 kDa, Protein from Semliki Forest virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Cryo-em structure of semliki forest virus in complex with its receptor vldlr(5-fold) (Complex from Semliki Forest virus)
- Spike glycoprotein e2 (46 kDa, Protein from Semliki Forest virus)
- Capsid protein (17 kDa, Protein from Semliki Forest virus)
- Very low-density lipoprotein receptor (4 kDa, Protein from Semliki Forest virus)
Eastern equine encephalitis virus (PE-6) VLP in complex with full-length VLDLR (asymmetric unit)
Resolution: 3.89 Å
EM Method: Single-particle
Fitted PDBs: 8ufb
Q-score: 0.336
Adams LJ, Raju S, Ma H, Gilliland Jr T, Reed DS, Klimstra WB, Fremont DH, Diamond MS
Cell (2024) 187 pp. 360-374.e19 [ Pubmed: 38176410 DOI: doi:10.1016/j.cell.2023.11.031 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Isoform short of very low-density lipoprotein receptor (82 kDa, Protein from Homo sapiens)
- Capsid protein (16 kDa, Protein from Eastern equine encephalitis virus)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- E1 protein (47 kDa, Protein from Eastern equine encephalitis virus)
- E2 protein (46 kDa, Protein from Eastern equine encephalitis virus)
Eastern equine encephalitis virus (PE-6) VLP in complex with VLDLR LA(1-2) (asymmetric unit)
Resolution: 3.09 Å
EM Method: Single-particle
Fitted PDBs: 8ufc
Q-score: 0.495
Adams LJ, Raju S, Ma H, Gilliland Jr T, Reed DS, Klimstra WB, Fremont DH, Diamond MS
Cell (2024) 187 pp. 360-374.e19 [ Pubmed: 38176410 DOI: doi:10.1016/j.cell.2023.11.031 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Capsid protein (16 kDa, Protein from Eastern equine encephalitis virus)
- Very low-density lipoprotein receptor (8 kDa, Protein from Homo sapiens)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- E1 protein (47 kDa, Protein from Eastern equine encephalitis virus)
- E2 protein (46 kDa, Protein from Eastern equine encephalitis virus)