Microtubule-associated Kif5B IAK tail mutant bound to ADP
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9gnq
Q-score: 0.54
Atherton J, Chegkazi MS, Peirano E, Pozzer LS, Foran T, Steiner RA
bioRxiv (2024) [ DOI: doi:10.1101/2024.11.11.622991 ]
- Beta tubulin (Complex from Sus scrofa)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Alpha-tubulin (Complex from Sus scrofa)
- Kinesin-1 heavy chain (44 kDa, Protein from Homo sapiens)
- 13pf microtubule bound to kif5bmonexxx in the presence of adp (246 MDa, Complex)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Tubulin alpha-1b chain (50 kDa, Protein from Sus scrofa)
- Taxol (853 Da, Ligand)
- Kif5bmonexxx bound with adp (Complex from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta chain (49 kDa, Protein from Sus scrofa)
ATAT-2 bound MEC-12/MEC-7 microtubule
Luo J, Lam WH, Yu D, Chao VC, Zopfi MN, Khoo CJ, Zhao C, Yan S, Liu Z, Li XD, Zheng C, Zhai Y, Ti SC
Nat Struct Mol Biol (2025) 32 pp. 358-368 [ Pubmed: 39496813 DOI: doi:10.1038/s41594-024-01406-3 ]
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
- Alpha-tubulin n-acetyltransferase 2 (30 kDa, Protein from Caenorhabditis elegans)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Mec-12/mec-7 microtubule in complex with full-length atat-2 (Complex from Caenorhabditis elegans)
- Tubulin beta-1 chain (49 kDa, Protein from Caenorhabditis elegans)
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
ATAT-2 bound MEC-12/MEC-7 microtubule without acetyl-CoA
Luo J, Lam WH, Yu D, Chao VC, Zopfi MN, Khoo CJ, Zhao C, Yan S, Liu Z, Li XD, Zheng C, Zhai Y, Ti SC
Nat Struct Mol Biol (2025) 32 pp. 358-368 [ Pubmed: 39496813 DOI: doi:10.1038/s41594-024-01406-3 ]
- Alpha tat2 bound mec-12/mec-7 microtubules withour acetyl-coa (Complex from Caenorhabditis elegans)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
- Alpha-tubulin n-acetyltransferase 2 (30 kDa, Protein from Caenorhabditis elegans)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin beta-1 chain (49 kDa, Protein from Caenorhabditis elegans)
- Piperazine-n,n'-bis(2-ethanesulfonic acid) (302 Da, Ligand)
ATAT-2 bound K40Q MEC-12/MEC-7 microtubule
Luo J, Lam WH, Yu D, Chao VC, Zopfi MN, Khoo CJ, Zhao C, Yan S, Liu Z, Li XD, Zheng C, Zhai Y, Ti SC
Nat Struct Mol Biol (2025) 32 pp. 358-368 [ Pubmed: 39496813 DOI: doi:10.1038/s41594-024-01406-3 ]
- K40q mec-12/mec-7 microtubule complexed with alpha tat2 (Complex from Caenorhabditis elegans)
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Alpha-tubulin n-acetyltransferase 2 (30 kDa, Protein from Caenorhabditis elegans)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Acetyl coenzyme *a (809 Da, Ligand)
- Tubulin beta-1 chain (49 kDa, Protein from Caenorhabditis elegans)
ATAT-2 bound K40R MEC-12/MEC-7 microtubule
Luo J, Lam WH, Yu D, Chao VC, Zopfi MN, Khoo CJ, Zhao C, Yan S, Liu Z, Li XD, Zheng C, Zhai Y, Ti SC
Nat Struct Mol Biol (2025) 32 pp. 358-368 [ Pubmed: 39496813 DOI: doi:10.1038/s41594-024-01406-3 ]
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- Tubulin alpha-3 chain (50 kDa, Protein from Caenorhabditis elegans)
- Alpha-tubulin n-acetyltransferase 2 (30 kDa, Protein from Caenorhabditis elegans)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Acetyl coenzyme *a (809 Da, Ligand)
- Tubulin beta-1 chain (49 kDa, Protein from Caenorhabditis elegans)
- K40r mec-12/mec-7 microtubule in complex with luminal atat-2 (Complex from Caenorhabditis elegans)
HURP (428-534)-alpha-tubulin-beta-tubulin complex
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 8x9p
Q-score: 0.352
To Be Published
- Tubulin beta chain (47 kDa, Protein from Bos taurus)
- Hurp (428-534)-alpha-tubulin-beta-tubulin complex (Complex from Homo sapiens)
- Disks large-associated protein 5,green fluorescent protein (76 kDa, Protein from Homo sapiens)
- Tubulin alpha chain (48 kDa, Protein from Bos taurus)
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 8va2
Q-score: 0.36
Aher A, Urnavicius L, Xue A, Neselu K, Kapoor TM
Nat Struct Mol Biol (2024) 31 pp. 1124-1133 [ DOI: doi:10.1038/s41594-024-01264-z Pubmed: 38609661 ]
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Tubulin alpha-1b chain (51 kDa, Protein from Homo sapiens)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Tubulin gamma-1 chain (50 kDa, Protein from Homo sapiens)
- Gamma-tubulin and alpha-tubulin (Complex from Trichoplusia ni)
GMPCPP-microtubule decorated with Abl2-557-1090
Duan D, Lyu W, Chai P, Ma S, Wu K, Wu C, Xiong Y, Sestan N, Zhang K, Koleske AJ
Curr Biol (2023) 33 pp. 4582-4598.e10 [ DOI: doi:10.1016/j.cub.2023.09.018 Pubmed: 37858340 ]
- Abl2 c-terminals (557-1090) (Protein from Homo sapiens)
- Abl2-557-1090 (Complex from Homo sapiens)
- Gmpcpp-microtubule (Complex from Sus scrofa)
- Alpha-tubulin (Protein from Sus scrofa)
- Gmpcpp-microtubules decorated with abl2-557-1090. (500 kDa, Complex)
- Beta-tubulin (Protein from Sus scrofa)
Serre L, Delaroche J, Vinit A, Schoehn G, Denarier E, Fourest-Lieuvin A, Arnal I
J Cell Sci (2022) [ DOI: doi:10.1242/jcs.260152 ]
Subpellicular microtubule from detergent-extract Toxoplasma gondii cells
Resolution: 6.7 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7tns
Q-score: 0.118
Sun SY, Segev-Zarko LA, Chen M, Pintilie GD, Schmid MF, Ludtke SJ, Boothroyd JC, Chiu W
PNAS (2022) 119 [ DOI: doi:10.1073/pnas.2111661119 Pubmed: 35121661 ]
- Tubulin beta chain (50 kDa, Protein from Toxoplasma gondii)
- Microtubule complex of alpha-tubulin and beta-tubulin with intra-lumenal proteins (Cellular component from Toxoplasma gondii)
- Tubulin alpha chain (50 kDa, Protein from Toxoplasma gondii)
- Pdi family protein (21 kDa, Protein from Toxoplasma gondii)
- Pdi family protein (24 kDa, Protein from Toxoplasma gondii)
- Microtubule associated protein spm1 (38 kDa, Protein from Toxoplasma gondii)