Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 9cmi
Q-score: 0.468
Rathnayake SS, Erramilli SK, Kossiakoff AA, Vecchio AJ
Structure (2024) 32 pp. 1936- [ Pubmed: 39383874 DOI: doi:10.1016/j.str.2024.09.015 ]
- Lauryl maltose neopentyl glycol (1 kDa, Ligand)
- Water (18 Da, Ligand)
- Heat-labile enterotoxin b chain (33 kDa, Protein from Clostridium perfringens)
- Cop-1 sfab heavy chain (28 kDa, Protein from Homo sapiens)
- Human claudin-4 complex with clostridium perfringens enterotoxin, sfab cop-1, and nanobody (120 kDa, Complex from synthetic construct)
- Anti-fab nanobody (13 kDa, Protein from Homo sapiens)
- Claudin-4 (22 kDa, Protein from Homo sapiens)
- Cop-1 sfab light chain (25 kDa, Protein from Homo sapiens)
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 8u4v
Q-score: 0.572
Erramilli SK, Dominik PK, Ogbu CP, Kossiakoff AA, Vecchio AJ
Commun Biol (2024) 7 pp. 733-733 [ DOI: doi:10.1038/s42003-024-06437-6 Pubmed: 38886509 ]
- Lauryl maltose neopentyl glycol (1 kDa, Ligand)
- Claudin-4 (22 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Heat-labile enterotoxin b chain (14 kDa, Protein from Clostridium perfringens)
- Cop-1 sfab heavy chain (28 kDa, Protein from Homo sapiens)
- Anti-fab nanobody (13 kDa, Protein from synthetic construct)
- Cop-1 sfab light chain (23 kDa, Protein from Homo sapiens)
- Human claudin-4 complex with clostridium perfringens enterotoxin c-terminal domain, sfab cop-1, and nanobody (100 kDa, Complex from Homo sapiens)
Cryo-EM structure of ACKR3 in complex with CXCL12 and an intracellular Fab
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7sk5
Q-score: 0.438
Yen YC, Schafer CT, Gustavsson M, Eberle SA, Dominik PK, Deneka D, Zhang P, Schall TJ, Kossiakoff AA, Tesmer JJG, Handel TM
Sci Adv (2022) 8 pp. eabn8063-eabn8063 [ Pubmed: 35857509 DOI: doi:10.1126/sciadv.abn8063 ]
- Atypical chemokine receptor 3 (45 kDa, Protein from Homo sapiens)
- Stromal cell-derived factor 1 (7 kDa, Protein from Homo sapiens)
- Cid24 fab light chain (23 kDa, Protein from Homo sapiens)
- Cid24 fab heavy chain (25 kDa, Protein from Homo sapiens)
- Anti-fab nanobody (13 kDa, Protein from Lama glama)
- Complex structure of ackr3-cxcl12-cid24-nb (Complex)
- Cholesterol (386 Da, Ligand)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7sk7
Q-score: 0.514
Yen YC, Schafer CT, Gustavsson M, Eberle SA, Dominik PK, Deneka D, Zhang P, Schall TJ, Kossiakoff AA, Tesmer JJG, Handel TM
Sci Adv (2022) 8 pp. eabn8063-eabn8063 [ Pubmed: 35857509 DOI: doi:10.1126/sciadv.abn8063 ]
- Atypical chemokine receptor 3 (45 kDa, Protein from Homo sapiens)
- Stromal cell-derived factor 1 (7 kDa, Protein from Homo sapiens)
- (1r)-4-[7-(3-carboxypropoxy)-6-methylquinolin-8-yl]-1-{[2-(4-hydroxypiperidin-1-yl)-1,3-thiazol-4-yl]methyl}-1,4-diazepan-1-ium (540 Da, Ligand)
- Cid25 fab heavy chain (25 kDa, Protein from Homo sapiens)
- Complex structure of nb-cid25-ackr3-cxcl12-ccx662 (Complex)
- Cid25 fab light chain (23 kDa, Protein from Homo sapiens)
- Anti-fab nanobody (13 kDa, Protein from Lama glama)
- Cholesterol (386 Da, Ligand)
Structure of human Frizzled5 by fiducial-assisted cryo-EM
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6ww2
Q-score: 0.42
Tsutsumi N, Mukherjee S, Waghray D, Janda CY, Jude KM, Miao Y, Burg JS, Aduri NG, Kossiakoff AA, Gati C, Garcia KC
eLife (2020) 9 [ Pubmed: 32762848 DOI: doi:10.7554/eLife.58464 ]
- Frizzled-5,soluble cytochrome b562 (74 kDa, Protein from Homo sapiens)
- Anti-fab nanobody (Complex)
- Frizzled-5 (Complex)
- Anti-bril fab (Complex)
- Anti-fab nanobody (13 kDa, Protein from synthetic construct)
- Anti-bril fab heavy chain (24 kDa, Protein from Homo sapiens)
- Anti-bril fab light chain (23 kDa, Protein from Homo sapiens)
- Fzd5-bril/fab/nb complex (100 kDa, Complex from Homo sapiens)