HPV18 L1 pentamer in complex with Fab F5-203
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 8yei
Q-score: -0.02
To Be Published
- Major capsid protein l1 (50 kDa, Protein from human papillomavirus 18)
- Hpv18 l1 pentamer in complex with fab f5-203 (Complex)
- Heavy chain of antibody f5-203 (13 kDa, Protein from Homo sapiens)
- Light chain of antibody f5-203 (11 kDa, Protein from Homo sapiens)
- Hpv18 l1 pentamer (Complex from human papillomavirus 18)
- Fab f5-203 (Complex from Homo sapiens)
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 8ygs
Q-score: 0.444
Huang Y, Song F, Zeng Y, Sun H, Sheng R, Wang X, Liu L, Luo G, Jiang Y, Chen Y, Zhang M, Zhang S, Gu Y, Yu H, Li S, Li T, Zheng Q, Ge S, Zhang J, Xia N
Nat Commun (2025) 16 pp. 838-838 [ Pubmed: 39833145 DOI: doi:10.1038/s41467-025-56114-3 ]
- Rotavirus vp4 (Complex from Rotavirus A)
- Immune complex of rotavirus with 7h13 (Complex from Rotavirus A)
- Fab 7h13 (Complex from Mus musculus)
- Antibody 7h13 heavy chain (12 kDa, Protein from Mus musculus)
- Outer capsid protein vp4 (64 kDa, Protein from Rotavirus A)
- Antibody 7h13 light chain (11 kDa, Protein from Mus musculus)
- Outer capsid protein vp4 (64 kDa, Protein from Rotavirus A)
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13-I54G mutant (left side)
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 8ygt
Q-score: 0.559
Huang Y, Song F, Zeng Y, Sun H, Sheng R, Wang X, Liu L, Luo G, Jiang Y, Chen Y, Zhang M, Zhang S, Gu Y, Yu H, Li S, Li T, Zheng Q, Ge S, Zhang J, Xia N
Nat Commun (2025) 16 pp. 838-838 [ Pubmed: 39833145 DOI: doi:10.1038/s41467-025-56114-3 ]
- Rotavirus vp4 (Complex from Rotavirus A)
- Immune complex of rotavirus with 7h13 (Complex from Rotavirus A)
- Fab 7h13 (Complex from Mus musculus)
- Antibody 7h13-i54g mutant heavy chain (12 kDa, Protein from Mus musculus)
- Antibody 7h13-i54g mutant light chain (11 kDa, Protein from Mus musculus)
- Outer capsid protein vp4 (64 kDa, Protein from Rotavirus A)
Cryo-EM structure of simian rotavirus SA11 VP4 in complex with nAb 7H13-I54G mutant (right side)
Resolution: 3.13 Å
EM Method: Single-particle
Fitted PDBs: 8ygu
Q-score: 0.526
Huang Y, Song F, Zeng Y, Sun H, Sheng R, Wang X, Liu L, Luo G, Jiang Y, Chen Y, Zhang M, Zhang S, Gu Y, Yu H, Li S, Li T, Zheng Q, Ge S, Zhang J, Xia N
Nat Commun (2025) 16 pp. 838-838 [ Pubmed: 39833145 DOI: doi:10.1038/s41467-025-56114-3 ]
- Rotavirus vp4 (Complex from Rotavirus A)
- Outer capsid protein vp4 (87 kDa, Protein from Rotavirus A)
- Immune complex of rotavirus with 7h13-i54g mutant (Complex from Rotavirus A)
- Fab 7h13 (Complex from Rotavirus A)
- Outer capsid protein vp4 (64 kDa, Protein from Rotavirus A)
- Antibody 7h13-i54g mutant light chain (11 kDa, Protein from Mus musculus)
- Antibody 7h13-i54g mutant heavy chain (12 kDa, Protein from Mus musculus)
Structure of XBB.1.16 S trimer with 2 down-RBDs complex with antibody CYFN1006-1.
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 8z6s
Q-score: 0.379
To Be Published
- Structure of xbb.1.16 s trimer with 2 down-rbds complex with antibody cyfn1006-1. (Complex from Severe acute respiratory syndrome coronavirus 2)
- Cyfn1006-1 heavy chain (49 kDa, Protein from Homo sapiens)
- Cyfn1006-1 light chain (22 kDa, Protein from Homo sapiens)
- Spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
Structure of EG.5.1 S trimer with 3 down-RBDs complex with antibody CYFN1006-2.
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 8z6w
Q-score: 0.351
To Be Published
- Spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
- Cyfn1006-2 heavy chain (23 kDa, Protein from Homo sapiens)
- Cyfn1006-2 light chain (22 kDa, Protein from Homo sapiens)
- Structure of eg.5.1 s trimer with 3 down-rbds complex with antibody cyfn1006-2. (Complex from Severe acute respiratory syndrome coronavirus 2)
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8znz
Q-score: 0.547
Xu JG, Chen S, He Y, Zhu X, Wang Y, Ye Z, Zhou JC, Wu X, Zhang L, Ren X, Jia H, Yu H, Wei X, Feng Y, Chen X, Cui X, Pan X, Wang S, Xia S, Shang H, Pu Y, Xu W, Li H, Chen Q, Chen Z, Wang M, Yan X, Shi H, Li M, Xia Y, Bellelli R, Dong S, He J, Huang J, Cai CL, Zhu X, Zhan Y, Wan L
Nat Commun (2024) 15 pp. 10872-10872 [ DOI: doi:10.1038/s41467-024-55207-9 Pubmed: 39738003 ]
- Hb0039 fab heavy chain (13 kDa, Protein from Homo sapiens)
- Hb0038 fab light chain (11 kDa, Protein from Homo sapiens)
- Hb0039 fab light chain (11 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Sodium ion (22 Da, Ligand)
- 5'-nucleotidase (58 kDa, Protein from Homo sapiens)
- Cd73 complexed with hb0017 antibody coaktail (630 kDa, Complex from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Hb0038 fab heavy chain (13 kDa, Protein from Homo sapiens)
Structure of XBB.1.16 S trimer with 3 down-RBDs complex with antibody CYFN1006-1.
To Be Published
- Cyfn1006-1 heavy chain (49 kDa, Protein from Homo sapiens)
- Structure of xbb.1.16 s trimer with 3 down-rbds complex with antibody cyfn1006-1. (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein,fibritin,spike glycoprotein,fibritin,spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
- Cyfn1006-1 light chain (22 kDa, Protein from Homo sapiens)
Structure of XBB.1.16 RBD in complex with antibody CYFN1006-1.
To Be Published
- Spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
- Cyfn1006-1 ligth chain (22 kDa, Protein from Homo sapiens)
- Cyfn1006-1 heavy chain (49 kDa, Protein from Homo sapiens)
- Structure of xbb.1.16 rbd in complex with antibody cyfn1006-1 (Complex from Severe acute respiratory syndrome coronavirus 2)
Structure of EG.5.1 RBD in complex with antibody CYFN1006-2.
To Be Published
- Spike glycoprotein,fibritin,expression tag (143 kDa, Protein from synthetic construct)
- Structure of eg.5.1 rbd in complex with antibody cyfn1006-2. (Complex from Severe acute respiratory syndrome coronavirus 2)
- Cyfn1006-2 heavy chain (49 kDa, Protein from Homo sapiens)
- Cyfn1006-2 light chain (22 kDa, Protein from Homo sapiens)