Williams WB, Meyerhoff RR, Edwards RJ, Li H, Nicely NI, Henderson R, Zhou Y, Janowska K, Mansouri K, Manne K, Stalls V, Hsu AL, Borgnia MJ, Stewart-Jones G, Lee MS, Bronkema N, Perfect J, Moody MA, Wiehe K, Bradley T, Kepler TB, Alam SM, Foulger A, Bonsignori M, LaBranche CC, Montefiori DC, Seaman M, Santra S, Francica JR, Lynn GM, Aussedat B, Walkowicz WE, Laga R, Kelso G, Saunders KO, Fera D, Kwong PD, Seder RA, Bartesaghi A, Shaw GM, Acharya P, Haynes BF
bioRxiv (2020) https://doi.org/10.1101/2020.06.30.178921 [ DOI: doi:10.1101/2020.06.30.178921 ]
- Hiv env ch848.3.d0949.10.17chim.6r.ds.sosip.664 (Protein from Human immunodeficiency virus 1)
- Antibody dh898.1 fragment antigen binding (fab) light chain (Protein from Macaca mulatta)
- Antibody dh898.1 fragment antigen binding (fab) heavy chain (Protein from Macaca mulatta)
- Hiv env ch848.3.d0949.10.17chim.6r.ds.sosip.664 trimer (Complex from Human immunodeficiency virus 1)
- Antibody dh898.1 fragment antigen binding (fab) dimer (Complex from Macaca mulatta)
- Antibody dh898.1 fab-dimer bound near the cd4 binding site of hiv env ch848.3.d0949.10.17chim.6r.ds.sosip.664 trimer (94 kDa, Complex)
Williams WB, Meyerhoff RR, Edwards RJ, Li H, Manne K, Nicely NI, Henderson R, Zhou Y, Janowska K, Mansouri K, Gobeil S, Evangelous T, Hora B, Berry M, Abuahmad AY, Sprenz J, Deyton M, Stalls V, Kopp M, Hsu AL, Borgnia MJ, Stewart-Jones GBE, Lee MS, Bronkema N, Moody MA, Wiehe K, Bradley T, Alam SM, Parks RJ, Foulger A, Oguin T, Sempowski GD, Bonsignori M, LaBranche CC, Montefiori DC, Seaman M, Santra S, Perfect J, Francica JR, Lynn GM, Aussedat B, Walkowicz WE, Laga R, Kelsoe G, Saunders KO, Fera D, Kwong PD, Seder RA, Bartesaghi A, Shaw GM, Acharya P, Haynes BF
Cell (2021) 184 pp. 2955-2972.e25 [ Pubmed: 34019795 DOI: doi:10.1016/j.cell.2021.04.042 ]
- Hiv env ch848.3.d0949.10.17chim.6r.ds.sosip.664 (Protein from Human immunodeficiency virus 1)
- Dh898.1 fab light chain (Protein from Macaca mulatta)
- Antibody dh898.1 fab-dimer bound to glycans 332, 392, and 396 of hiv env ch848.3.d0949.10.17chim.6r.ds.sosip.664 trimer (94 kDa, Complex)
- Dh898.1 fab heavy chain (Protein from Macaca mulatta)
- Hiv env ch848.3.d0949.10.17chim.6r.ds.sosip.664 trimer (Complex from Human immunodeficiency virus 1)
- Antibody dh898.1 fragment antigen binding (fab) dimer (Complex from Macaca mulatta)
Williams WB, Meyerhoff RR, Edwards RJ, Li H, Manne K, Nicely NI, Henderson R, Zhou Y, Janowska K, Mansouri K, Gobeil S, Evangelous T, Hora B, Berry M, Abuahmad AY, Sprenz J, Deyton M, Stalls V, Kopp M, Hsu AL, Borgnia MJ, Stewart-Jones GBE, Lee MS, Bronkema N, Moody MA, Wiehe K, Bradley T, Alam SM, Parks RJ, Foulger A, Oguin T, Sempowski GD, Bonsignori M, LaBranche CC, Montefiori DC, Seaman M, Santra S, Perfect J, Francica JR, Lynn GM, Aussedat B, Walkowicz WE, Laga R, Kelsoe G, Saunders KO, Fera D, Kwong PD, Seder RA, Bartesaghi A, Shaw GM, Acharya P, Haynes BF
Cell (2021) 184 pp. 2955-2972.e25 [ Pubmed: 34019795 DOI: doi:10.1016/j.cell.2021.04.042 ]
- Dh898.1 fab light chain (Protein from Macaca mulatta)
- Hiv env ch848.3.d0949.10.17chim.6r.ds.sosip.664 trimer (210 kDa, Complex from Human immunodeficiency virus 1)
- Antibody dh898.1 fragment antigen binding (fab) dimer (94 kDa, Complex from Macaca mulatta)
- Antibody dh898.1 fab-dimer bound to glycans 332, 392, and 396 of hiv env ch848.3.d0949.10.17chim.6r.ds.sosip.664 trimer (304 kDa, Complex)
- Dh898.1 fab heavy chain (Protein from Macaca mulatta)
Fibriansah G, Lim EXY, Marzinek JK, Ng TS, Tan JL, Huber RG, Lim XN, Chew VSY, Kostyuchenko VA, Shi J, Anand GS, Bond PJ, Crowe Jr JE, Lok SM
PLoS Pathog (2021) 17 pp. e1009331-e1009331 [ Pubmed: 33621239 DOI: doi:10.1371/journal.ppat.1009331 ]
- Dengue virus serotype 2 strain pvp94/07 membrane protein (Protein from Dengue virus 2)
- Dengue virus serotype 2 strain pvp94/07 in complex with human antibody 1c19 fab (Complex from Dengue virus 2)
- Dengue virus 2 (Complex from Homo sapiens)
- Human antibody 1c19 fab (Complex)
- Dengue virus serotype 2 strain pvp94/07 envelope protein (Protein from Dengue virus 2)
- Anti-dengue virus human monoclonal antibody 1c19 fab heavy chain (Protein from Homo sapiens)
- Anti-dengue virus human monoclonal antibody 1c19 fab light chain (Protein from Homo sapiens)
Fibriansah G, Lim EXY, Marzinek JK, Ng TS, Tan JL, Huber RG, Lim XN, Chew VSY, Kostyuchenko VA, Shi J, Anand GS, Bond PJ, Crowe Jr JE, Lok SM
PLoS Pathog (2021) 17 pp. e1009331-e1009331 [ Pubmed: 33621239 DOI: doi:10.1371/journal.ppat.1009331 ]
- Dengue virus serotype 2 strain pvp94/07 membrane protein (Protein from Dengue virus 2)
- Dengue virus serotype 2 strain pvp94/07 in complex with human antibody 1c19 fab (Complex from Dengue virus 2)
- Dengue virus 2 (Complex)
- Human antibody 1c19 fab (Complex)
- Dengue virus serotype 2 strain pvp94/07 envelope protein (Protein from Dengue virus 2)
- Anti-dengue virus human monoclonal antibody 1c19 fab heavy chain (Protein from Homo sapiens)
- Anti-dengue virus human monoclonal antibody 1c19 fab light chain (Protein from Homo sapiens)
Cryo-electron microscopy reconstruction of locally refined antibody DH898.1 Fab-dimer
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 7l6m
Q-score: 0.267
Williams WB, Meyerhoff RR, Edwards RJ, Li H, Manne K, Nicely NI, Henderson R, Zhou Y, Janowska K, Mansouri K, Gobeil S, Evangelous T, Hora B, Berry M, Abuahmad AY, Sprenz J, Deyton M, Stalls V, Kopp M, Hsu AL, Borgnia MJ, Stewart-Jones GBE, Lee MS, Bronkema N, Moody MA, Wiehe K, Bradley T, Alam SM, Parks RJ, Foulger A, Oguin T, Sempowski GD, Bonsignori M, LaBranche CC, Montefiori DC, Seaman M, Santra S, Perfect J, Francica JR, Lynn GM, Aussedat B, Walkowicz WE, Laga R, Kelsoe G, Saunders KO, Fera D, Kwong PD, Seder RA, Bartesaghi A, Shaw GM, Acharya P, Haynes BF
Cell (2021) 184 pp. 2955-2972.e25 [ Pubmed: 34019795 DOI: doi:10.1016/j.cell.2021.04.042 ]
Laursen NS, Friesen RHE, Zhu X, Jongeneelen M, Blokland S, Vermond J, van Eijgen A, Tang C, van Diepen H, Obmolova G, van der Neut Kolfschoten M, Zuijdgeest D, Straetemans R, Hoffman RMB, Nieusma T, Pallesen J, Turner HL, Bernard SM, Ward AB, Luo J, Poon LLM, Tretiakova AP, Wilson JM, Limberis MP, Vogels R, Brandenburg B, Kolkman JA, Wilson IA
Science (2018) 362 pp. 598-602 [ Pubmed: 30385580 DOI: doi:10.1126/science.aaq0620 ]
- Fab from igg cr9114 (50 kDa, Complex from Homo sapiens)
- Hemagglutinin trimeric ectodomain (Complex from Influenza B virus (B/Massachusetts/02/2012))
- Single-domain antibody sd84 (25 kDa, Complex from Lama glama)
- Hemagglutinin trimeric ectodomain (b/massachusetts/02/2012) in complex with fab from igg cr9114 and single-domain antibody sd84. (400 kDa, Complex)
Structure of parvovirus B19 decorated with Fab molecules from a human antibody
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6nn3
Q-score: 0.521
Rossmann MG, Sun Y, Klose T, Liu Y, Meng G
To Be Published
- Antibody 860-55d light chain (10 kDa, Protein from Homo sapiens)
- Human parvovirus b19 (Virus from Human parvovirus B19)
- Antibody 860-55d fab (Complex from Homo sapiens)
- Antibody 860-55d heavy chain (11 kDa, Protein from Homo sapiens)
- Vp2 (60 kDa, Protein from Human parvovirus B19)
- Complex of b19 vlp with fab molecules of antibody 860-55d (5 MDa, Complex)
Ozorowski G, Pallesen J, de Val N, Lyumkis D, Cottrell CA, Torres JL, Copps J, Stanfield RL, Cupo A, Pugach P, Moore JP, Wilson IA, Ward AB
Nature (2017) 547 pp. 360-363 [ Pubmed: 28700571 DOI: doi:10.1038/nature23010 ]
- Hiv-1 env bg505 sosip.664 gp41 (Protein from Human immunodeficiency virus 1)
- Broadly neutralizing antibody (fab) 17b (Complex from Homo sapiens)
- Hiv-1 env bg505 sosip.664 in complex with soluble cd4 (2-domain) and fab domain of neutralizing 17b antibody (150 kDa, Complex from Human immunodeficiency virus 1)
- Cd4 (2-domain) (Complex from Homo sapiens)
- Broadly neutralizing antibody (fab) 17b heavy chain (Protein from Homo sapiens)
- Broadly neutralizing antibody (fab) 17b light chain (Protein from Homo sapiens)
- Hiv-1 env bg505 sosip.664 (Complex from Human immunodeficiency virus 1)
- Hiv-1 env bg505 sosip.664 gp120 (Protein from Human immunodeficiency virus 1)
- Soluble cd4 (2-domain) (Protein from Homo sapiens)