Interphotoreceptor retinoid-binding protein (IRBP) in complex with a monoclonal antibody (F3F5 mAb5)
Resolution: 7.4 Å
EM Method: Single-particle
Fitted PDBs: 7jti
Q-score: 0.048
Sears AE, Albiez S, Gulati S, Wang B, Kiser P, Kovacik L, Engel A, Stahlberg H, Palczewski K
FASEB J (2020) 34 pp. 13918-13934 [ DOI: doi:10.1096/fj.202000796RR Pubmed: 32860273 ]
- Complex between interphotoreceptor retinoid-binding protein and a monoclonal antibody (193 kDa, Complex)
- Retinol-binding protein 3 (32 kDa, Protein from Bos taurus)
- Retinol-binding protein 3 (33 kDa, Protein from Bos taurus)
- Mab5 fab heavy chain (23 kDa, Protein from Mus musculus)
- Retinol-binding protein 3 (33 kDa, Protein from Bos taurus)
- Monoclonal antibody f3f5 mab5 (Complex from Mus musculus)
- Interphotoreceptor retinoid-binding protein (irbp) (Complex from Bos taurus)
- Mab5 fab light chain (22 kDa, Protein from Mus musculus)
- Retinol-binding protein 3 (32 kDa, Protein from Bos taurus)
Structure of full-length, fully glycosylated, non-modified HIV-1 gp160 bound to PG16 Fab
Resolution: 6.2 Å
EM Method: Single-particle
Fitted PDBs: 6pwu
Q-score: 0.151
Pan J, Peng H, Chen B, Harrison SC
J Mol Biol (2020) 432 pp. 1158-1168 [ DOI: doi:10.1016/j.jmb.2019.11.028 Pubmed: 31931014 ]
- Antibody pg16 fab light chain (26 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hiv-1 gp160 trimer:pg16 fab complex (530 kDa, Complex)
- Antibody pg16 fab (Complex from Homo sapiens)
- Antibody pg16 fab heavy chain (31 kDa, Protein from Homo sapiens)
- Hiv-1 envelope glycoprotein gp160 (mature) (Complex from Human immunodeficiency virus 1)
- Envelope glycoprotein gp160 (97 kDa, Protein from Human immunodeficiency virus 1)
Fit R10 Fab coordinates into the cryo-EM of EV71 in complex with A9
Resolution: 6.8 Å
EM Method: Single-particle
Fitted PDBs: 5zuf
Q-score: 0.127
Zhu L, Xu K, Wang N, Cao L, Wu J, Gao Q, Fry EE, Stuart DI, Rao Z, Wang J, Wang X
Mbio (2018) 9 [ DOI: doi:10.1128/mBio.01013-18 Pubmed: 29970466 ]
- Capsid protein vp1 (32 kDa, Protein from Enterovirus A71)
- Vp2 (26 kDa, Protein from Enterovirus A71)
- R10 antibody heavy chain (23 kDa, Protein from Mus musculoides)
- A9 neutralizing antibody fab (Complex from Mus musculoides)
- Vp3 (26 kDa, Protein from Enterovirus A71)
- R10 antibody light chain (23 kDa, Protein from Mus musculoides)
- Complex of ev71 and a9 neutralizing antibody fab (Complex)
- Ev71 (Complex from Enterovirus A71)
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-42 antibody
Resolution: 7.7 Å
EM Method: Single-particle
Fitted PDBs: 6mui
Q-score: 0.075
Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG
Cell Rep (2018) 25 pp. 3136-3147.e5 [ Pubmed: 30540945 DOI: doi:10.1016/j.celrep.2018.11.067 ]
- E2 (53 kDa, Protein from Eastern equine encephalitis virus)
- Eeev-42 fab (Complex from Mus musculus)
- Eeev-42 antibody heavy chain (23 kDa, Protein from Mus musculus)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- E1 (47 kDa, Protein from Eastern equine encephalitis virus)
- Eeev-42 antibody light chain (23 kDa, Protein from Mus musculus)
- Eastern equine encephalitis virus / eeev-42 fab complex (Complex)
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-3 antibody
Resolution: 7.3 Å
EM Method: Single-particle
Fitted PDBs: 6mw9
Q-score: 0.097
Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG
Cell Rep (2018) 25 pp. 3136-3147.e5 [ Pubmed: 30540945 DOI: doi:10.1016/j.celrep.2018.11.067 ]
- Eeev-3 antibody light chain (23 kDa, Protein from Mus musculus)
- Eeev-3 antibody heavy chain (23 kDa, Protein from Mus musculus)
- Eastern equine encephalitis virus / eeev-3 fab complex (Complex)
- Eastern equine encephalitis virus (Complex from Eastern equine encephalitis virus)
- E1 (47 kDa, Protein from Eastern equine encephalitis virus)
- Eeev-3 fab (Complex from Mus musculus)
- E2 (47 kDa, Protein from Eastern equine encephalitis virus)
CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-5 antibody
Resolution: 7.5 Å
EM Method: Single-particle
Fitted PDBs: 6mwc
Q-score: 0.087
Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG
Cell Rep (2018) 25 pp. 3136-3147.e5 [ Pubmed: 30540945 DOI: doi:10.1016/j.celrep.2018.11.067 ]
- Eastern equine encephalitis virus / eeev-5 fab complex (Complex)
- Eeev-5 fab (Complex from Mus musculus)
- Eeev-5 antibody heavy chain (23 kDa, Protein from Mus musculus)
- Eastern equine encephalitis virus (Complex from Eastern equine encephalitis virus)
- E1 (47 kDa, Protein from Eastern equine encephalitis virus)
- E2 (47 kDa, Protein from Eastern equine encephalitis virus)
- Eeev-5 antibody light chain (23 kDa, Protein from Mus musculus)
CryoEM structure of Chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-58 Antibody
Resolution: 7.3 Å
EM Method: Single-particle
Fitted PDBs: 6mwv
Q-score: 0.092
Hasan SS, Sun C, Kim AS, Watanabe Y, Chen CL, Klose T, Buda G, Crispin M, Diamond MS, Klimstra WB, Rossmann MG
Cell Rep (2018) 25 pp. 3136-3147.e5 [ Pubmed: 30540945 DOI: doi:10.1016/j.celrep.2018.11.067 ]
- Eeev-58 antibody light chain (23 kDa, Protein from Mus musculus)
- Eeev-58 antibody heavy chain (23 kDa, Protein from Mus musculus)
- E1 (47 kDa, Protein from Eastern equine encephalitis virus)
- Eastern equine encephalitis virus (Complex from Eastern equine encephalitis virus)
- Eastern equine encephalitis virus / eeev-58 fab complex (Complex)
- Eeev-58 fab (Complex from Mus musculus)
- E2 (47 kDa, Protein from Eastern equine encephalitis virus)