Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7kcr
Q-score: 0.436
Sevvana M, Rogers TF, Miller AS, Long F, Klose T, Beutler N, Lai YC, Parren M, Walker LM, Buda G, Burton DR, Rossmann MG, Kuhn RJ
Viruses (2020) 12 [ Pubmed: 33255202 DOI: doi:10.3390/v12121346 ]
- Adi30056 fab heavy chain variable region (13 kDa, Protein from Homo sapiens)
- Envelope protein e (54 kDa, Protein from Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013)
- Zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013 (Virus from Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013)
- Monoclonal antibody adi30056 (Complex from Homo sapiens)
- Zika virus in complex with monoclonal antibody adi30056 (15 MDa, Complex)
- Adi30056 fab light chain variable region (11 kDa, Protein from Homo sapiens)
- Membrane protein m (8 kDa, Protein from Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013)
Enterovirus D68 in complex with human monoclonal antibody EV68-159
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 6wds
Q-score: 0.631
Vogt MR, Fu J, Kose N, Williamson LE, Bombardi R, Setliff I, Georgiev IS, Klose T, Rossmann MG, Bochkov YA, Gern JE, Kuhn RJ, Crowe Jr JE
Sci Immunol (2020) 5 [ Pubmed: 32620559 DOI: doi:10.1126/sciimmunol.aba4902 ]
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Ev68-159 heavy chain (13 kDa, Protein from Homo sapiens)
- Enterovirus d68 in complex with human monoclonal antibody ev68-159 (Complex)
- Enterovirus d68 (Virus from Enterovirus D68)
- Human antibody ev68-159 (Complex from Homo sapiens)
- Ev68-159 light chain (11 kDa, Protein from Homo sapiens)
Enterovirus D68 in complex with human monoclonal antibody EV68-228
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6wdt
Q-score: 0.589
Vogt MR, Fu J, Kose N, Williamson LE, Bombardi R, Setliff I, Georgiev IS, Klose T, Rossmann MG, Bochkov YA, Gern JE, Kuhn RJ, Crowe Jr JE
Sci Immunol (2020) 5 [ Pubmed: 32620559 DOI: doi:10.1126/sciimmunol.aba4902 ]
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Ev68-228 light chain (11 kDa, Protein from Homo sapiens)
- Enterovirus d68 in complex with human monoclonal antibody ev68-228 (Complex)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
- Human monoclonal antibody ev68-228 (Complex from Homo sapiens)
- Ev68-228 heavy chain (14 kDa, Protein from Homo sapiens)
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 6mid
Q-score: 0.451
Long F, Doyle M, Fernandez E, Miller AS, Klose T, Sevvana M, Bryan A, Davidson E, Doranz BJ, Kuhn RJ, Diamond MS, Crowe Jr JE, Rossmann MG
PNAS (2019) 116 pp. 1591-1596 [ DOI: doi:10.1073/pnas.1815432116 Pubmed: 30642974 ]
- Zika virus (isolate zikv/human/french polynesia/10087pf/2013) (Virus from Zika virus (isolate ZIKV/Human/French Polynesia/10087PF/2013))
- Zikv virion in complex with fab fragments of the potently neutralizing human monoclonal antibody zikv-195 (Complex)
- M protein (8 kDa, Protein from Zika virus (isolate ZIKV/Human/French Polynesia/10087PF/2013))
- Monoclonal antibody zikv-195 light chain (11 kDa, Protein from Homo sapiens)
- E protein (54 kDa, Protein from Zika virus (isolate ZIKV/Human/French Polynesia/10087PF/2013))
- Monoclonal antibody zikv-195 (Complex from Homo sapiens)
- Monoclonal antibody zikv-195 heavy chain (14 kDa, Protein from Homo sapiens)
Urakami A, Sakurai A, Ishikawa M, Yap ML, Flores-Garcia Y, Haseda Y, Aoshi T, Zavala FP, Rossmann MG, Kuno S, Ueno R, Akahata W
Clin Vaccine Immunol (2017) 24 [ Pubmed: 28515133 DOI: doi:10.1128/CVI.00090-17 ]
Resolution: 2.53 Å
EM Method: Single-particle
Fitted PDBs: 5w3e
Q-score: 0.644
Dong Y, Liu Y, Jiang W, Smith TJ, Xu Z, Rossmann MG
PNAS (2017) 114 pp. 8017-8022 [ Pubmed: 28696310 DOI: doi:10.1073/pnas.1707369114 ]
- C5 antibody variable heavy domain (11 kDa, Protein from Mus musculus)
- Viral protein 3 (26 kDa, Protein from Human rhinovirus 14)
- Viral protein 4 (7 kDa, Protein from Human rhinovirus 14)
- Water (18 Da, Ligand)
- C5 antibody variable light domain (10 kDa, Protein from Mus musculus)
- Human rhinovirus b14 (Virus from Human rhinovirus B14)
- Viral protein 2 (28 kDa, Protein from Human rhinovirus 14)
- Viral protein 1 (32 kDa, Protein from Human rhinovirus 14)
Resolution: 2.71 Å
EM Method: Single-particle
Fitted PDBs: 5w3l
Q-score: 0.627
Dong Y, Liu Y, Jiang W, Smith TJ, Xu Z, Rossmann MG
PNAS (2017) 114 pp. 8017-8022 [ Pubmed: 28696310 DOI: doi:10.1073/pnas.1707369114 ]
- C5 antibody variable heavy domain (11 kDa, Protein from Mus musculus)
- Viral protein 3 (26 kDa, Protein from Human rhinovirus 14)
- Viral protein 4 (7 kDa, Protein from Human rhinovirus 14)
- Water (18 Da, Ligand)
- C5 antibody variable light domain (10 kDa, Protein from Mus musculus)
- Human rhinovirus b14 (Virus from Human rhinovirus B14)
- Viral protein 2 (28 kDa, Protein from Human rhinovirus 14)
- Viral protein 1 (32 kDa, Protein from Human rhinovirus 14)
Resolution: 2.26 Å
EM Method: Single-particle
Fitted PDBs: 5w3m
Q-score: 0.69
Dong Y, Liu Y, Jiang W, Smith TJ, Xu Z, Rossmann MG
PNAS (2017) 114 pp. 8017-8022 [ Pubmed: 28696310 DOI: doi:10.1073/pnas.1707369114 ]
- C5 antibody variable heavy domain (11 kDa, Protein from Mus musculus)
- Viral protein 3 (26 kDa, Protein from Human rhinovirus 14)
- Viral protein 4 (7 kDa, Protein from Human rhinovirus 14)
- Water (18 Da, Ligand)
- C5 antibody variable light domain (10 kDa, Protein from Mus musculus)
- Human rhinovirus b14 (Virus from Human rhinovirus B14)
- Viral protein 2 (28 kDa, Protein from Human rhinovirus 14)
- Viral protein 1 (32 kDa, Protein from Human rhinovirus 14)
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 5w3o
Q-score: 0.555
Dong Y, Liu Y, Jiang W, Smith TJ, Xu Z, Rossmann MG
PNAS (2017) 114 pp. 8017-8022 [ Pubmed: 28696310 DOI: doi:10.1073/pnas.1707369114 ]
- C5 antibody variable heavy domain (11 kDa, Protein from Mus musculus)
- Viral protein 3 (26 kDa, Protein from Human rhinovirus 14)
- C5 antibody variable light domain (10 kDa, Protein from Mus musculus)
- Human rhinovirus b14 (Virus from Human rhinovirus B14)
- Viral protein 2 (28 kDa, Protein from Human rhinovirus 14)
- Viral protein 1 (32 kDa, Protein from Human rhinovirus 14)
Electron cryo-microscopy of chikungunya virus in complex with neutralizing antibody Fab CHK265
Resolution: 16.9 Å
EM Method: Single-particle
Fitted PDBs: 5any
Q-score: -0.013
Fox JM, Long F, Edeling MA, Lin H, Duijl-Richter M, Fong RH, Kahle KM, Smit JM, Jin J, Simmons G, Doranz BJ, Crowe JE, Fremont DH, Rossmann MG, Diamond MS
Cell (2015) 163 pp. 1095-1107 [ DOI: doi:10.1016/J.CELL.2015.10.050 Pubmed: 26553503 ]