The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state
Resolution: 2.99 Å
EM Method: Single-particle
Fitted PDBs: 6ywe
Q-score: 0.575
Itoh Y, Naschberger A, Mortezaei N, Herrmann JM, Amunts A
Nat Commun (2020) 11 pp. 5187-5187 [ DOI: doi:10.1038/s41467-020-18830-w Pubmed: 33056988 ]
- Bl19m (28 kDa, Protein from Neurospora crassa)
- 60s ribosomal protein l1, mitochondrial (33 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml36, mitochondrial (23 kDa, Protein from Neurospora crassa)
- Ms46 (43 kDa, Protein from Neurospora crassa)
- Ribosomal protein s6 (13 kDa, Protein from Neurospora crassa)
- Mitochondrial large ribosomal subunit (41 kDa, Protein from Neurospora crassa)
- Potassium ion (39 Da, Ligand)
- Translational machinery component (42 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l30 (18 kDa, Protein from Neurospora crassa)
- Ribosomal protein l15 (33 kDa, Protein from Neurospora crassa)
- Probable ribosomal protein s13 (13 kDa, Protein from Neurospora crassa)
- Ul23m (26 kDa, Protein from Neurospora crassa)
- 3-hydroxyisobutyryl-coa hydrolase, mitochondrial (56 kDa, Protein from Neurospora crassa)
- Zinc ion (65 Da, Ligand)
- Mrna (3 kDa, RNA from Neurospora crassa)
- Ribosomal protein s18 (28 kDa, Protein from Neurospora crassa)
- Trna p/e state (23 kDa, RNA from Neurospora crassa)
- Bl33m (7 kDa, Protein from Neurospora crassa)
- Ribonuclease iii (48 kDa, Protein from Neurospora crassa)
- 54s ribosomal protein l31, mitochondrial (13 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l16, mitochondrial (27 kDa, Protein from Neurospora crassa)
- Ul11m (16 kDa, Protein from Neurospora crassa)
- Rnase iii domain-containing protein (29 kDa, Protein from Neurospora crassa)
- Bs1m (51 kDa, Protein from Neurospora crassa)
- Us9m (35 kDa, Protein from Neurospora crassa)
- 37s ribosomal protein s25, mitochondrial (29 kDa, Protein from Neurospora crassa)
- Mitoribosome of neurospora crassa in the p/e state (Complex from Neurospora crassa)
- Spermine (202 Da, Ligand)
- Mrp-l46 domain-containing protein (41 kDa, Protein from Neurospora crassa)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Ribosomal_l9 domain-containing protein (33 kDa, Protein from Neurospora crassa)
- Ul17m (22 kDa, Protein from Neurospora crassa)
- Duf1713 domain-containing protein (38 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml32 (mitochondrial),mitochondrial ribosomal protein subunit l32 (14 kDa, Protein from Neurospora crassa)
- Ribosomal protein s12 (18 kDa, Protein from Neurospora crassa)
- Ms45 (39 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l34, mitochondrial (14 kDa, Protein from Neurospora crassa)
- Ml41 (11 kDa, Protein from Neurospora crassa)
- Ribosomal protein s19/s15 (10 kDa, Protein from Neurospora crassa)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- 16s rrna (600 kDa, RNA from Neurospora crassa)
- Us8m (17 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml11, mitochondrial (37 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l3, mitochondrial (41 kDa, Protein from Neurospora crassa)
- Us17m (18 kDa, Protein from Neurospora crassa)
- 54s ribosomal protein l4, mitochondrial (29 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml20, mitochondrial (25 kDa, Protein from Neurospora crassa)
- Mitochondrial 37s ribosomal protein mrp2 (13 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l5, mitochondrial (39 kDa, Protein from Neurospora crassa)
- Related to 60s ribosomal protein l2 (mitochondrial) (49 kDa, Protein from Neurospora crassa)
- Mitoc_ml59 domain-containing protein (18 kDa, Protein from Neurospora crassa)
- Kow domain-containing protein (45 kDa, Protein from Neurospora crassa)
- Ribosomal protein l14 (14 kDa, Protein from Neurospora crassa)
- 30s ribosomal protein s10, mitochondrial (30 kDa, Protein from Neurospora crassa)
- Probable ribosomal protein yml44, mitochondrial (11 kDa, Protein from Neurospora crassa)
- Ribosomal_s7 domain-containing protein (33 kDa, Protein from Neurospora crassa)
- If1 (10 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml49, mitochondrial (23 kDa, Protein from Neurospora crassa)
- L51_s25_ci-b8 domain-containing protein (15 kDa, Protein from Neurospora crassa)
- Ml40 (41 kDa, Protein from Neurospora crassa)
- Ms26 (35 kDa, Protein from Neurospora crassa)
- Magnesium ion (24 Da, Ligand)
- Ml54 (23 kDa, Protein from Neurospora crassa)
- Ml49 (18 kDa, Protein from Neurospora crassa)
- 37s ribosomal protein mrp10, mitochondrial (9 kDa, Protein from Neurospora crassa)
- 60s ribosomal protein l4, variant (36 kDa, Protein from Neurospora crassa)
- Manganese and iron superoxide dismutase (34 kDa, Protein from Neurospora crassa)
- S4 rna-binding domain-containing protein (51 kDa, Protein from Neurospora crassa)
- Ms27 (44 kDa, Protein from Neurospora crassa)
- 23s rrna (1 MDa, RNA from Neurospora crassa)
- Bs16m (12 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein s5 (mitochondrial) (53 kDa, Protein from Neurospora crassa)
- Ul6m (28 kDa, Protein from Neurospora crassa)
- Ml50 (49 kDa, Protein from Neurospora crassa)
- Bs21m (25 kDa, Protein from Neurospora crassa)
- Mitochondrial ribosomal protein dap3 (51 kDa, Protein from Neurospora crassa)
- Ms33 (12 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein s15 (mitochondrial) (35 kDa, Protein from Neurospora crassa)
- 37s ribosomal protein s24, mitochondrial (44 kDa, Protein from Neurospora crassa)
- Ribosomal protein (13 kDa, Protein from Neurospora crassa)
- L51_s25_ci-b8 domain-containing protein (22 kDa, Protein from Neurospora crassa)
- Ribosomal protein s5 (58 kDa, Protein from Neurospora crassa)
- Ul13m (20 kDa, Protein from Neurospora crassa)
- Pebp-like protein (50 kDa, Protein from Neurospora crassa)
- Bl28m (31 kDa, Protein from Neurospora crassa)
- Protein fyv4, mitochondrial (26 kDa, Protein from Neurospora crassa)
- 60s ribosomal protein l2, mitochondrial (42 kDa, Protein from Neurospora crassa)
- Mito ribosomal protein s2 (47 kDa, Protein from Neurospora crassa)
- Ml67 (32 kDa, Protein from Neurospora crassa)
The structure of the mitoribosome from Neurospora crassa with tRNA bound to the E-site
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6ywx
Q-score: 0.546
Itoh Y, Naschberger A, Mortezaei N, Herrmann JM, Amunts A
Nat Commun (2020) 11 pp. 5187-5187 [ DOI: doi:10.1038/s41467-020-18830-w Pubmed: 33056988 ]
- 60s ribosomal protein l3 (41 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial ribosomal protein subunit l32 (14 kDa, Protein from Neurospora crassa OR74A)
- Mitoribosome of neurospora crassa with trna in the e-site (Complex from Neurospora crassa OR74A)
- Fe superoxide dismutase (34 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial ribosomal protein subunit l23 (26 kDa, Protein from Neurospora crassa OR74A)
- Potassium ion (39 Da, Ligand)
- If1 (10 kDa, Protein from Neurospora crassa OR74A)
- Mito ribosomal protein s4 (51 kDa, Protein from Neurospora crassa OR74A)
- 54s ribosomal protein l4, mitochondrial (29 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial ribosomal protein subunit s18 (42 kDa, Protein from Neurospora crassa OR74A)
- Ribosomal protein s15 (35 kDa, Protein from Neurospora crassa OR74A)
- Rnase iii domain-containing protein (29 kDa, Protein from Neurospora crassa OR74A)
- Bl33m (7 kDa, Protein from Neurospora crassa OR74A)
- 60s ribosomal protein l20 (25 kDa, Protein from Neurospora crassa OR74A)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l14 (14 kDa, Protein from Neurospora crassa OR74A)
- Bl31m (23 kDa, Protein from Neurospora crassa OR74A)
- Ribosomal protein s16, mitochondrial (12 kDa, Protein from Neurospora crassa OR74A)
- 60s ribosomal protein l19 (16 kDa, Protein from Neurospora crassa OR74A)
- 60s ribosomal protein l2 (42 kDa, Protein from Neurospora crassa OR74A)
- 50s ribosomal subunit protein l15 (33 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial large ribosomal subunit (41 kDa, Protein from Neurospora crassa OR74A)
- 37s ribosomal protein s5 (53 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial ribosomal protein dap3 (51 kDa, Protein from Neurospora crassa OR74A)
- 3-hydroxyisobutyryl-coa hydrolase, mitochondrial (56 kDa, Protein from Neurospora crassa OR74A)
- Bl27m (49 kDa, Protein from Neurospora crassa OR74A)
- 40s ribosomal protein s8 (17 kDa, Protein from Neurospora crassa OR74A)
- 60s ribosomal protein l6 (28 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial ribosomal protein s19 (10 kDa, Protein from Neurospora crassa OR74A)
- Ms33 (12 kDa, Protein from Neurospora crassa OR74A)
- 50s ribosomal protein l5 (39 kDa, Protein from Neurospora crassa OR74A)
- 50s ribosomal protein l24 (31 kDa, Protein from Neurospora crassa OR74A)
- Trna e-site (19 kDa, RNA from Neurospora crassa OR74A)
- Spermine (202 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- 60s ribosomal protein l4, variant (36 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial 40s ribosomal protein mrp2 (13 kDa, Protein from Neurospora crassa OR74A)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Aconitate hydratase (23 kDa, Protein from Neurospora crassa OR74A)
- Ribosomal protein s5, mitochondrial (58 kDa, Protein from Neurospora crassa OR74A)
- Ribosomal_l9 domain-containing protein (33 kDa, Protein from Neurospora crassa OR74A)
- 37s ribosomal protein s24, mitochondrial (44 kDa, Protein from Neurospora crassa OR74A)
- Ribosomal protein l13 (20 kDa, Protein from Neurospora crassa OR74A)
- 50s ribosomal protein l30 (18 kDa, Protein from Neurospora crassa OR74A)
- Ml40 (41 kDa, Protein from Neurospora crassa OR74A)
- Ml49 (18 kDa, Protein from Neurospora crassa OR74A)
- 50s ribosomal subunit l30 (41 kDa, Protein from Neurospora crassa OR74A)
- 60s ribosomal protein l1 (33 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial 37s ribosomal protein s17 (18 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial ribosomal protein (28 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial ribosomal protein l44 (11 kDa, Protein from Neurospora crassa OR74A)
- 37s ribosomal protein s10, mitochondrial (30 kDa, Protein from Neurospora crassa OR74A)
- Ml54 (23 kDa, Protein from Neurospora crassa OR74A)
- Ribosomal protein (13 kDa, Protein from Neurospora crassa OR74A)
- Magnesium ion (24 Da, Ligand)
- Mitochondrial 30s ribosomal protein s12 (18 kDa, Protein from Neurospora crassa OR74A)
- Duf1713 domain-containing protein (38 kDa, Protein from Neurospora crassa OR74A)
- Ml67 (32 kDa, Protein from Neurospora crassa OR74A)
- L51_s25_ci-b8 domain-containing protein (22 kDa, Protein from Neurospora crassa OR74A)
- Igr domain-containing protein (26 kDa, Protein from Neurospora crassa OR74A)
- Ul10m (37 kDa, Protein from Neurospora crassa OR74A)
- 37s ribosomal protein s9, mitochondrial (35 kDa, Protein from Neurospora crassa OR74A)
- 60s ribosomal protein l16 (27 kDa, Protein from Neurospora crassa OR74A)
- Related to ribosomal protein l34, mitochondrial (14 kDa, Protein from Neurospora crassa OR74A)
- Ms27 (44 kDa, Protein from Neurospora crassa OR74A)
- Mito ribosomal protein s2 (47 kDa, Protein from Neurospora crassa OR74A)
- Ribosomal_s7 domain-containing protein (33 kDa, Protein from Neurospora crassa OR74A)
- 40s ribosomal protein s13 (13 kDa, Protein from Neurospora crassa OR74A)
- 50s ribosomal protein l17 (22 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial ribosomal protein l43 (15 kDa, Protein from Neurospora crassa OR74A)
- Mito ribosomal protein s6 (13 kDa, Protein from Neurospora crassa OR74A)
- Mito ribosomal protein s21 (25 kDa, Protein from Neurospora crassa OR74A)
- 54s ribosomal protein l31, mitochondrial (13 kDa, Protein from Neurospora crassa OR74A)
- Ms26 (35 kDa, Protein from Neurospora crassa OR74A)
- Ml50 (49 kDa, Protein from Neurospora crassa OR74A)
- Mito ribosomal protein s18 (28 kDa, Protein from Neurospora crassa OR74A)
- Ms45 (39 kDa, Protein from Neurospora crassa OR74A)
- Ml41 (11 kDa, Protein from Neurospora crassa OR74A)
- Bs1m (51 kDa, Protein from Neurospora crassa OR74A)
- Kow domain-containing protein (45 kDa, Protein from Neurospora crassa OR74A)
- 60s ribosomal protein l3 (48 kDa, Protein from Neurospora crassa OR74A)
- 37s ribosomal protein s25, mitochondrial (29 kDa, Protein from Neurospora crassa OR74A)
- 16s rrna (600 kDa, RNA from Neurospora crassa OR74A)
- 23s rrna (1 MDa, RNA from Neurospora crassa OR74A)
- Mitochondrial large ribosomal subunit yml35 (50 kDa, Protein from Neurospora crassa OR74A)
- 37s ribosomal protein mrp10, mitochondrial (9 kDa, Protein from Neurospora crassa OR74A)
- Ms46 (43 kDa, Protein from Neurospora crassa OR74A)
- Mitochondrial 60s ribosomal protein l25 (18 kDa, Protein from Neurospora crassa OR74A)
The structure of the mitoribosome from Neurospora crassa with bound tRNA at the P-site
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 6ywy
Q-score: 0.56
Itoh Y, Naschberger A, Mortezaei N, Herrmann JM, Amunts A
Nat Commun (2020) 11 pp. 5187-5187 [ DOI: doi:10.1038/s41467-020-18830-w Pubmed: 33056988 ]
- Bl19m (28 kDa, Protein from Neurospora crassa)
- 60s ribosomal protein l1, mitochondrial (33 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml36, mitochondrial (23 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml32 (mitochondrial) (14 kDa, Protein from Neurospora crassa)
- Ms46 (43 kDa, Protein from Neurospora crassa)
- Mitoribosome of neurospora crassa in the trna bound state (p-site). (Complex from Neurospora crassa)
- Ribosomal protein s6 (13 kDa, Protein from Neurospora crassa)
- Poly-peptide (515 Da, Protein from Neurospora crassa)
- Mitochondrial large ribosomal subunit (41 kDa, Protein from Neurospora crassa)
- Potassium ion (39 Da, Ligand)
- Translational machinery component (42 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l30 (18 kDa, Protein from Neurospora crassa)
- Ribosomal protein l15 (33 kDa, Protein from Neurospora crassa)
- Probable ribosomal protein s13 (13 kDa, Protein from Neurospora crassa)
- Ul23m (26 kDa, Protein from Neurospora crassa)
- 3-hydroxyisobutyryl-coa hydrolase, mitochondrial (56 kDa, Protein from Neurospora crassa)
- Zinc ion (65 Da, Ligand)
- Ribosomal protein s18 (28 kDa, Protein from Neurospora crassa)
- Bl33m (7 kDa, Protein from Neurospora crassa)
- Ribonuclease iii (48 kDa, Protein from Neurospora crassa)
- 54s ribosomal protein l31, mitochondrial (13 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l16, mitochondrial (27 kDa, Protein from Neurospora crassa)
- Ul11m (16 kDa, Protein from Neurospora crassa)
- Rnase iii domain-containing protein (29 kDa, Protein from Neurospora crassa)
- Bs1m (51 kDa, Protein from Neurospora crassa)
- Us9m (35 kDa, Protein from Neurospora crassa)
- 37s ribosomal protein s25, mitochondrial (29 kDa, Protein from Neurospora crassa)
- Spermine (202 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Ribosomal_l9 domain-containing protein (33 kDa, Protein from Neurospora crassa)
- Ul17m (22 kDa, Protein from Neurospora crassa)
- Duf1713 domain-containing protein (38 kDa, Protein from Neurospora crassa)
- Ribosomal protein s12 (18 kDa, Protein from Neurospora crassa)
- Ms45 (39 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l34, mitochondrial (14 kDa, Protein from Neurospora crassa)
- Ml41 (11 kDa, Protein from Neurospora crassa)
- Ribosomal protein s19/s15 (10 kDa, Protein from Neurospora crassa)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- 16s rrna (600 kDa, RNA from Neurospora crassa)
- Us8m (17 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml11, mitochondrial (37 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l3, mitochondrial (41 kDa, Protein from Neurospora crassa)
- Us17m (18 kDa, Protein from Neurospora crassa)
- 54s ribosomal protein l4, mitochondrial (29 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml20, mitochondrial (25 kDa, Protein from Neurospora crassa)
- Mitochondrial 37s ribosomal protein mrp2 (13 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein l5, mitochondrial (39 kDa, Protein from Neurospora crassa)
- Related to 60s ribosomal protein l2 (mitochondrial) (49 kDa, Protein from Neurospora crassa)
- Mitoc_ml59 domain-containing protein (18 kDa, Protein from Neurospora crassa)
- Kow domain-containing protein (45 kDa, Protein from Neurospora crassa)
- Ribosomal protein l14 (14 kDa, Protein from Neurospora crassa)
- 30s ribosomal protein s10, mitochondrial (30 kDa, Protein from Neurospora crassa)
- Probable ribosomal protein yml44, mitochondrial (11 kDa, Protein from Neurospora crassa)
- Ribosomal_s7 domain-containing protein (33 kDa, Protein from Neurospora crassa)
- If1 (10 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein yml49, mitochondrial (23 kDa, Protein from Neurospora crassa)
- P-site-trna (23 kDa, RNA from Neurospora crassa)
- L51_s25_ci-b8 domain-containing protein (15 kDa, Protein from Neurospora crassa)
- Ml40 (41 kDa, Protein from Neurospora crassa)
- Ms26 (35 kDa, Protein from Neurospora crassa)
- Magnesium ion (24 Da, Ligand)
- Ml54 (23 kDa, Protein from Neurospora crassa)
- Ml49 (18 kDa, Protein from Neurospora crassa)
- 37s ribosomal protein mrp10, mitochondrial (9 kDa, Protein from Neurospora crassa)
- 60s ribosomal protein l4, variant (36 kDa, Protein from Neurospora crassa)
- Manganese and iron superoxide dismutase (34 kDa, Protein from Neurospora crassa)
- S4 rna-binding domain-containing protein (51 kDa, Protein from Neurospora crassa)
- Ms27 (44 kDa, Protein from Neurospora crassa)
- 23s rrna (1 MDa, RNA from Neurospora crassa)
- Bs16m (12 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein s5 (mitochondrial) (53 kDa, Protein from Neurospora crassa)
- Ml46 (41 kDa, Protein from Neurospora crassa)
- Ul6m (28 kDa, Protein from Neurospora crassa)
- Mrna (3 kDa, RNA from Neurospora crassa)
- Ml50 (49 kDa, Protein from Neurospora crassa)
- Bs21m (25 kDa, Protein from Neurospora crassa)
- Mitochondrial ribosomal protein dap3 (51 kDa, Protein from Neurospora crassa)
- Ms33 (12 kDa, Protein from Neurospora crassa)
- Related to ribosomal protein s15 (mitochondrial) (35 kDa, Protein from Neurospora crassa)
- 37s ribosomal protein s24, mitochondrial (44 kDa, Protein from Neurospora crassa)
- Ribosomal protein (13 kDa, Protein from Neurospora crassa)
- L51_s25_ci-b8 domain-containing protein (22 kDa, Protein from Neurospora crassa)
- Ribosomal protein s5 (58 kDa, Protein from Neurospora crassa)
- Ul13m (20 kDa, Protein from Neurospora crassa)
- Pebp-like protein (50 kDa, Protein from Neurospora crassa)
- Bl28m (31 kDa, Protein from Neurospora crassa)
- Protein fyv4, mitochondrial (26 kDa, Protein from Neurospora crassa)
- 60s ribosomal protein l2, mitochondrial (42 kDa, Protein from Neurospora crassa)
- Mito ribosomal protein s2 (47 kDa, Protein from Neurospora crassa)
- Ml67 (32 kDa, Protein from Neurospora crassa)
Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6eri
Q-score: 0.514
Boerema AP, Aibara S, Paul B, Tobiasson V, Kimanius D, Forsberg BO, Wallden K, Lindahl E, Amunts A
Nat Plants (2018) 4 pp. 212-217 [ Pubmed: 29610536 DOI: doi:10.1038/s41477-018-0129-6 ]
- 50s ribosomal protein l17, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s10 alpha, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s12, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l13, chloroplastic (22 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s13, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s19, chloroplastic (9 kDa, Protein from Spinacia oleracea)
- 5s ribosomal rna (38 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein 6, chloroplastic (5 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l2, chloroplastic (26 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s18, chloroplastic (6 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l16, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l28, chloroplastic (8 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s31, chloroplastic (4 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l29, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein 5 alpha, chloroplastic (6 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l3, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l4, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l34, chloroplastic (6 kDa, Protein from Spinacia oleracea)
- 23s ribosomal rna (911 kDa, RNA from Spinacia oleracea)
- 30s ribosomal protein s8, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s15, chloroplastic (8 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l9, chloroplastic (5 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l36, chloroplastic (4 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s5, chloroplastic (16 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s4, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- Ribosome-recycling factor, chloroplastic (21 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l24, chloroplastic (14 kDa, Protein from Spinacia oleracea)
- Chloroplast ribosome in complex with rrf (Complex from Spinacia oleracea)
- 4.5s ribosomal rna (34 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein l14, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- Ribosome-binding factor psrp1, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l21, chloroplastic (18 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s14, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l19, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l5, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l23, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- 16s ribosomal rna (480 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein l6, chloroplastic (19 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l35, chloroplastic (8 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l32, chloroplastic (5 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s3, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s11, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- Bs1c (14 kDa, Protein from Spinacia oleracea)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l20, chloroplastic (14 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s17, chloroplastic (9 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s20, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s9, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l18, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l22, chloroplastic (19 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l31, chloroplastic (7 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l33, chloroplastic (7 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l27, chloroplastic (12 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s6 alpha, chloroplastic (12 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s16, chloroplastic (9 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s21, chloroplastic (7 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s2, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s7, chloroplastic (16 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l15, chloroplastic (20 kDa, Protein from Spinacia oleracea)
Structure of the yeast mitochondrial ribosome - Class A
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 5mrc
Q-score: 0.443
Desai N, Brown A, Amunts A, Ramakrishnan V
Science (2017) 355 pp. 528-531 [ Pubmed: 28154081 DOI: doi:10.1126/science.aal2415 ]
- Bl32m (13 kDa, Protein from Baker's yeast)
- Bl28m (25 kDa, Protein from Baker's yeast)
- Ul2m (43 kDa, Protein from Baker's yeast)
- Ms33 (11 kDa, Protein from Baker's yeast)
- Ml38 (40 kDa, Protein from Baker's yeast)
- Bl33m (7 kDa, Protein from Baker's yeast)
- Ms44 (39 kDa, Protein from Baker's yeast)
- Us10m (21 kDa, Protein from Baker's yeast)
- Us14m (13 kDa, Protein from Baker's yeast)
- Bl21m (13 kDa, Protein from Baker's yeast)
- Ms45 (36 kDa, Protein from Baker's yeast)
- Ul5m (31 kDa, Protein from Baker's yeast)
- Us11m (16 kDa, Protein from Baker's yeast)
- Ul23m (24 kDa, Protein from Baker's yeast)
- Ml44 (36 kDa, Protein from Baker's yeast)
- Us2m (29 kDa, Protein from Baker's yeast)
- Zinc ion (65 Da, Ligand)
- Us3m (47 kDa, Protein from Baker's yeast)
- Bs1m (39 kDa, Protein from Baker's yeast)
- Bl19m (17 kDa, Protein from Baker's yeast)
- Us13m (13 kDa, Protein from Baker's yeast)
- Ms43 (36 kDa, Protein from Baker's yeast)
- Ms42 (29 kDa, Protein from Baker's yeast)
- Ul16m (22 kDa, Protein from Baker's yeast)
- Bs18m (11 kDa, Protein from Baker's yeast)
- Unknown protein sequence 2 (12 kDa, Protein from Baker's yeast)
- Ul22m (25 kDa, Protein from Baker's yeast)
- Bl35m (7 kDa, Protein from Baker's yeast)
- Yeast mitochondrial ribosome - class a (Complex from Saccharomyces cerevisiae)
- Ul29m (26 kDa, Protein from Baker's yeast)
- Unknown protein sequence 1 (8 kDa, Protein from Baker's yeast)
- Ms26 (26 kDa, Protein from Baker's yeast)
- Ml40 (13 kDa, Protein from Baker's yeast)
- Bl34m (5 kDa, Protein from Baker's yeast)
- Ms38 (4 kDa, Protein from Baker's yeast)
- Ml59 (18 kDa, Protein from Baker's yeast)
- Ms35 (32 kDa, Protein from Baker's yeast)
- Bs21m (10 kDa, Protein from Baker's yeast)
- Us19m (9 kDa, Protein from Baker's yeast)
- Trna (24 kDa, RNA from Baker's yeast)
- Us8m (17 kDa, Protein from Baker's yeast)
- Ms47 (51 kDa, Protein from Baker's yeast)
- Ml46 (32 kDa, Protein from Baker's yeast)
- Us9m (27 kDa, Protein from Baker's yeast)
- Ul4m (28 kDa, Protein from Baker's yeast)
- Ms41 (11 kDa, Protein from Baker's yeast)
- 15s ribosomal rna (528 kDa, RNA from Baker's yeast)
- Bs16m (13 kDa, Protein from Baker's yeast)
- Ml49 (12 kDa, Protein from Baker's yeast)
- Us17m (27 kDa, Protein from Baker's yeast)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Us12m (13 kDa, Protein from Baker's yeast)
- Bl9m (8 kDa, Protein from Baker's yeast)
- Ms23 (27 kDa, Protein from Baker's yeast)
- Ml67 (25 kDa, Protein from Baker's yeast)
- Bl31m (20 kDa, Protein from Baker's yeast)
- Ms29 (45 kDa, Protein from Baker's yeast)
- Bl17m (26 kDa, Protein from Baker's yeast)
- Ul30m (9 kDa, Protein from Baker's yeast)
- Us7m (18 kDa, Protein from Baker's yeast)
- Ml60 (14 kDa, Protein from Baker's yeast)
- Bl36m (4 kDa, Protein from Baker's yeast)
- Ms46 (18 kDa, Protein from Baker's yeast)
- Magnesium ion (24 Da, Ligand)
- Bl27m (39 kDa, Protein from Baker's yeast)
- Sodium ion (22 Da, Ligand)
- Ul6m (21 kDa, Protein from Baker's yeast)
- Ul14m (14 kDa, Protein from Baker's yeast)
- Ms37 (10 kDa, Protein from Baker's yeast)
- Ul24m (33 kDa, Protein from Baker's yeast)
- Ul15m (24 kDa, Protein from Baker's yeast)
- Ml58 (20 kDa, Protein from Baker's yeast)
- Ul13m (18 kDa, Protein from Baker's yeast)
- Us4m (56 kDa, Protein from Baker's yeast)
- Ml50 (30 kDa, Protein from Baker's yeast)
- Ml57 (23 kDa, Protein from Baker's yeast)
- Bs6m (14 kDa, Protein from Baker's yeast)
- 21s ribosomal rna (1 MDa, RNA from Baker's yeast)
- Ul3m (27 kDa, Protein from Baker's yeast)
- Us5m (33 kDa, Protein from Baker's yeast)
- Us15m (29 kDa, Protein from Baker's yeast)
- Ml41 (14 kDa, Protein from Baker's yeast)
- Ml43 (15 kDa, Protein from Baker's yeast)
Structure of the yeast mitochondrial ribosome - Class B
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 5mre
Q-score: 0.368
Desai N, Brown A, Amunts A, Ramakrishnan V
Science (2017) 355 pp. 528-531 [ Pubmed: 28154081 DOI: doi:10.1126/science.aal2415 ]
- Ml67 (25 kDa, Protein from Saccharomyces cerevisiae)
- Ms46 (18 kDa, Protein from Saccharomyces cerevisiae)
- Ul4m (28 kDa, Protein from Saccharomyces cerevisiae)
- Ul22m (25 kDa, Protein from Saccharomyces cerevisiae)
- Bl28m (25 kDa, Protein from Saccharomyces cerevisiae)
- Bs1m (39 kDa, Protein from Saccharomyces cerevisiae)
- Us5m (33 kDa, Protein from Saccharomyces cerevisiae)
- Bl33m (7 kDa, Protein from Saccharomyces cerevisiae)
- Us3m (47 kDa, Protein from Saccharomyces cerevisiae)
- Bl17m (26 kDa, Protein from Saccharomyces cerevisiae)
- Ul29m (26 kDa, Protein from Saccharomyces cerevisiae)
- 15s ribosomal rna (528 kDa, RNA from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Ms26 (26 kDa, Protein from Saccharomyces cerevisiae)
- Yeast mitochondrial ribosome - class b (Complex from Saccharomyces cerevisiae)
- Us12m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ms35 (32 kDa, Protein from Saccharomyces cerevisiae)
- Us13m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ml38 (40 kDa, Protein from Saccharomyces cerevisiae)
- Ul24m (33 kDa, Protein from Saccharomyces cerevisiae)
- Ml57 (23 kDa, Protein from Saccharomyces cerevisiae)
- Bl32m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ml50 (30 kDa, Protein from Saccharomyces cerevisiae)
- Ms33 (11 kDa, Protein from Saccharomyces cerevisiae)
- Ul13m (18 kDa, Protein from Saccharomyces cerevisiae)
- Us8m (17 kDa, Protein from Saccharomyces cerevisiae)
- Ul5m (31 kDa, Protein from Saccharomyces cerevisiae)
- Bs21m (10 kDa, Protein from Saccharomyces cerevisiae)
- Ul15m (24 kDa, Protein from Saccharomyces cerevisiae)
- Us2m (29 kDa, Protein from Saccharomyces cerevisiae)
- Bs18m (11 kDa, Protein from Saccharomyces cerevisiae)
- Ml59 (18 kDa, Protein from Saccharomyces cerevisiae)
- Ms44 (39 kDa, Protein from Saccharomyces cerevisiae)
- Ms41 (11 kDa, Protein from Saccharomyces cerevisiae)
- Bl31m (20 kDa, Protein from Saccharomyces cerevisiae)
- Bl35m (7 kDa, Protein from Saccharomyces cerevisiae)
- Ul14m (14 kDa, Protein from Saccharomyces cerevisiae)
- Ms37 (10 kDa, Protein from Saccharomyces cerevisiae)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Ms23 (27 kDa, Protein from Saccharomyces cerevisiae)
- Ml58 (20 kDa, Protein from Saccharomyces cerevisiae)
- Ml49 (12 kDa, Protein from Saccharomyces cerevisiae)
- Us15m (29 kDa, Protein from Saccharomyces cerevisiae)
- Ms38 (4 kDa, Protein from Saccharomyces cerevisiae)
- Ml41 (14 kDa, Protein from Saccharomyces cerevisiae)
- Us9m (27 kDa, Protein from Saccharomyces cerevisiae)
- Us14m (13 kDa, Protein from Saccharomyces cerevisiae)
- Bl36m (4 kDa, Protein from Saccharomyces cerevisiae)
- Bl27m (39 kDa, Protein from Saccharomyces cerevisiae)
- Us7m (18 kDa, Protein from Saccharomyces cerevisiae)
- Ul30m (9 kDa, Protein from Saccharomyces cerevisiae)
- Trna (24 kDa, RNA from Saccharomyces cerevisiae)
- Us11m (16 kDa, Protein from Saccharomyces cerevisiae)
- Ul16m (22 kDa, Protein from Saccharomyces cerevisiae)
- Bl9m (8 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- Ul6m (21 kDa, Protein from Saccharomyces cerevisiae)
- Us4m (56 kDa, Protein from Saccharomyces cerevisiae)
- Bs6m (14 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Ms43 (36 kDa, Protein from Saccharomyces cerevisiae)
- Ul3m (27 kDa, Protein from Saccharomyces cerevisiae)
- Bs16m (13 kDa, Protein from Saccharomyces cerevisiae)
- Sodium ion (22 Da, Ligand)
- Ml43 (15 kDa, Protein from Saccharomyces cerevisiae)
- Ms42 (29 kDa, Protein from Saccharomyces cerevisiae)
- Us10m (21 kDa, Protein from Saccharomyces cerevisiae)
- Bl34m (5 kDa, Protein from Saccharomyces cerevisiae)
- Us19m (9 kDa, Protein from Saccharomyces cerevisiae)
- Ms45 (36 kDa, Protein from Saccharomyces cerevisiae)
- Ml44 (36 kDa, Protein from Saccharomyces cerevisiae)
- Ml60 (14 kDa, Protein from Saccharomyces cerevisiae)
- Ms29 (45 kDa, Protein from Saccharomyces cerevisiae)
- Ml40 (13 kDa, Protein from Saccharomyces cerevisiae)
- Ul23m (24 kDa, Protein from Saccharomyces cerevisiae)
- Us17m (27 kDa, Protein from Saccharomyces cerevisiae)
- Bl21m (13 kDa, Protein from Saccharomyces cerevisiae)
- 21s ribosomal rna (1 MDa, RNA from Saccharomyces cerevisiae)
- Ml46 (32 kDa, Protein from Saccharomyces cerevisiae)
- Ul2m (43 kDa, Protein from Saccharomyces cerevisiae)
- Bl19m (17 kDa, Protein from Saccharomyces cerevisiae)
- Ms47 (51 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence 2 (12 kDa, Protein from Saccharomyces cerevisiae)
Structure of the yeast mitochondrial ribosome - Class C
Resolution: 4.97 Å
EM Method: Single-particle
Fitted PDBs: 5mrf
Q-score: 0.241
Desai N, Brown A, Amunts A, Ramakrishnan V
Science (2017) 355 pp. 528-531 [ Pubmed: 28154081 DOI: doi:10.1126/science.aal2415 ]
- Ml67 (25 kDa, Protein from Saccharomyces cerevisiae)
- Ms46 (18 kDa, Protein from Saccharomyces cerevisiae)
- Ul4m (28 kDa, Protein from Saccharomyces cerevisiae)
- Ul22m (25 kDa, Protein from Saccharomyces cerevisiae)
- Bl28m (25 kDa, Protein from Saccharomyces cerevisiae)
- Bs1m (39 kDa, Protein from Saccharomyces cerevisiae)
- Us5m (33 kDa, Protein from Saccharomyces cerevisiae)
- Bl33m (7 kDa, Protein from Saccharomyces cerevisiae)
- Us3m (47 kDa, Protein from Saccharomyces cerevisiae)
- Bl17m (26 kDa, Protein from Saccharomyces cerevisiae)
- Ul29m (26 kDa, Protein from Saccharomyces cerevisiae)
- Yeast mitochondrial ribosome - class c (Complex from Saccharomyces cerevisiae)
- 15s ribosomal rna (528 kDa, RNA from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Ms26 (26 kDa, Protein from Saccharomyces cerevisiae)
- Us12m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ms35 (32 kDa, Protein from Saccharomyces cerevisiae)
- Us13m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ml38 (40 kDa, Protein from Saccharomyces cerevisiae)
- Ul24m (33 kDa, Protein from Saccharomyces cerevisiae)
- Ml57 (23 kDa, Protein from Saccharomyces cerevisiae)
- Bl32m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ml50 (30 kDa, Protein from Saccharomyces cerevisiae)
- Ms33 (11 kDa, Protein from Saccharomyces cerevisiae)
- Ul13m (18 kDa, Protein from Saccharomyces cerevisiae)
- Us8m (17 kDa, Protein from Saccharomyces cerevisiae)
- Ul5m (31 kDa, Protein from Saccharomyces cerevisiae)
- Bs21m (10 kDa, Protein from Saccharomyces cerevisiae)
- Ul15m (24 kDa, Protein from Saccharomyces cerevisiae)
- Us2m (29 kDa, Protein from Saccharomyces cerevisiae)
- Bs18m (11 kDa, Protein from Saccharomyces cerevisiae)
- Ml59 (18 kDa, Protein from Saccharomyces cerevisiae)
- Ms44 (39 kDa, Protein from Saccharomyces cerevisiae)
- Ms41 (11 kDa, Protein from Saccharomyces cerevisiae)
- Bl31m (20 kDa, Protein from Saccharomyces cerevisiae)
- Bl35m (7 kDa, Protein from Saccharomyces cerevisiae)
- Ul14m (14 kDa, Protein from Saccharomyces cerevisiae)
- Ms37 (10 kDa, Protein from Saccharomyces cerevisiae)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Ms23 (27 kDa, Protein from Saccharomyces cerevisiae)
- Ml58 (20 kDa, Protein from Saccharomyces cerevisiae)
- Ml49 (12 kDa, Protein from Saccharomyces cerevisiae)
- Us15m (29 kDa, Protein from Saccharomyces cerevisiae)
- Ms38 (4 kDa, Protein from Saccharomyces cerevisiae)
- Ml41 (14 kDa, Protein from Saccharomyces cerevisiae)
- Us9m (27 kDa, Protein from Saccharomyces cerevisiae)
- Us14m (13 kDa, Protein from Saccharomyces cerevisiae)
- Bl36m (4 kDa, Protein from Saccharomyces cerevisiae)
- Bl27m (39 kDa, Protein from Saccharomyces cerevisiae)
- Us7m (18 kDa, Protein from Saccharomyces cerevisiae)
- Ul30m (9 kDa, Protein from Saccharomyces cerevisiae)
- Trna (24 kDa, RNA from Saccharomyces cerevisiae)
- Us11m (16 kDa, Protein from Saccharomyces cerevisiae)
- Ul16m (22 kDa, Protein from Saccharomyces cerevisiae)
- Bl9m (8 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- Ul6m (21 kDa, Protein from Saccharomyces cerevisiae)
- Us4m (56 kDa, Protein from Saccharomyces cerevisiae)
- Bs6m (14 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Ms43 (36 kDa, Protein from Saccharomyces cerevisiae)
- Ul3m (27 kDa, Protein from Saccharomyces cerevisiae)
- Bs16m (13 kDa, Protein from Saccharomyces cerevisiae)
- Sodium ion (22 Da, Ligand)
- Ml43 (15 kDa, Protein from Saccharomyces cerevisiae)
- Ms42 (29 kDa, Protein from Saccharomyces cerevisiae)
- Us10m (21 kDa, Protein from Saccharomyces cerevisiae)
- Bl34m (5 kDa, Protein from Saccharomyces cerevisiae)
- Us19m (9 kDa, Protein from Saccharomyces cerevisiae)
- Ms45 (36 kDa, Protein from Saccharomyces cerevisiae)
- Ml44 (36 kDa, Protein from Saccharomyces cerevisiae)
- Ml60 (14 kDa, Protein from Saccharomyces cerevisiae)
- Ms29 (45 kDa, Protein from Saccharomyces cerevisiae)
- Ml40 (13 kDa, Protein from Saccharomyces cerevisiae)
- Ul23m (24 kDa, Protein from Saccharomyces cerevisiae)
- Us17m (27 kDa, Protein from Saccharomyces cerevisiae)
- Bl21m (13 kDa, Protein from Saccharomyces cerevisiae)
- 21s ribosomal rna (1 MDa, RNA from Saccharomyces cerevisiae)
- Ml46 (32 kDa, Protein from Saccharomyces cerevisiae)
- Ul2m (43 kDa, Protein from Saccharomyces cerevisiae)
- Bl19m (17 kDa, Protein from Saccharomyces cerevisiae)
- Ms47 (51 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence 2 (12 kDa, Protein from Saccharomyces cerevisiae)
Cryo-EM reconstruction of the small subunit of the chloroplast ribosome
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 5mmj
Q-score: 0.396
Bieri P, Leibundgut M, Saurer M, Boehringer D, Ban N
EMBO J (2017) 36 pp. 475-486 [ Pubmed: 28007896 DOI: doi:10.15252/embj.201695959 ]
- Plastid ribosomal protein us10c (21 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s7, chloroplastic (17 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s3, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s19 alpha, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s4, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 16s ribosomal rna (483 kDa, RNA from Spinacia oleracea)
- 30s ribosomal protein s14, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein us17c (18 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein 3, chloroplastic (20 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s16, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- Ribosome-binding factor psrp1, chloroplastic (33 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein us13c (19 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s8, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s31, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s11, chloroplastic (14 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein us9c (22 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bs21c (20 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s2, chloroplastic (26 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s15, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bs20c (20 kDa, Protein from Spinacia oleracea)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l31 (14 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bs6c (23 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein 2, chloroplastic (28 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s12, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bs1c (14 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s5, chloroplastic (33 kDa, Protein from Spinacia oleracea)
- Chloroplast 70s ribosome (2 MDa, Complex from Spinacia oleracea)
- 30s ribosomal protein s18, chloroplastic (12 kDa, Protein from Spinacia oleracea)
Cryo-EM reconstruction of the 70S chloroplast ribosome
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 5mmm
Q-score: 0.406
Bieri P, Leibundgut M, Saurer M, Boehringer D, Ban N
EMBO J (2017) 36 pp. 475-486 [ Pubmed: 28007896 DOI: doi:10.15252/embj.201695959 ]
- Plastid ribosomal protein us10c (21 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein 6, chloroplastic (12 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s7, chloroplastic (17 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s3, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein ul15c (29 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein ul6c (24 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein cl37, psrp5 (15 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s19 alpha, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l32, chloroplastic (6 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s4, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 16s ribosomal rna (483 kDa, RNA from Spinacia oleracea)
- Plastid ribosomal protein ul4c (32 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s14, chloroplastic (11 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l34, chloroplastic (16 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein us17c (18 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l2, chloroplastic (29 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l11, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s16, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein 3, chloroplastic (20 kDa, Protein from Spinacia oleracea)
- Ribosome-binding factor psrp1, chloroplastic (33 kDa, Protein from Spinacia oleracea)
- Trna-phe (24 kDa, RNA from Spinacia oleracea)
- Plastid ribosomal protein us13c (19 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bl27c (21 kDa, Protein from Spinacia oleracea)
- 23s ribosomal rna (911 kDa, RNA from Spinacia oleracea)
- Plastid ribosomal protein ul5c (28 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l35, chloroplastic (17 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l22, chloroplastic (23 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s8, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l16, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s31, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l36, chloroplastic (4 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein us9c (22 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s11, chloroplastic (14 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bs21c (20 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l14, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- 4.5s ribosomal rna (34 kDa, RNA from Spinacia oleracea)
- 30s ribosomal protein s2, chloroplastic (26 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s15, chloroplastic (10 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bs20c (20 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bl28c (16 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bl9c (22 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein ul14c (14 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein ul10c (26 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s18, chloroplastic (12 kDa, Protein from Spinacia oleracea)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l20, chloroplastic (15 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l31 (14 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bs6c (23 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein ul3c (33 kDa, Protein from Spinacia oleracea)
- Zinc ion (65 Da, Ligand)
- 30s ribosomal protein 2, chloroplastic (28 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l21, chloroplastic (28 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s12, chloroplastic (13 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein bs1c (14 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l33, chloroplastic (7 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s5, chloroplastic (33 kDa, Protein from Spinacia oleracea)
- Chloroplast 70s ribosome (2 MDa, Complex from Spinacia oleracea)
- Plastid ribosomal protein ul24c (21 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein ul29c (19 kDa, Protein from Spinacia oleracea)
- 5s ribosomal rna (39 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein l19, chloroplastic (26 kDa, Protein from Spinacia oleracea)
- Plastid ribosomal protein ul18c (18 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l23, chloroplastic (21 kDa, Protein from Spinacia oleracea)
- 50s ribosomal protein l13, chloroplastic (28 kDa, Protein from Spinacia oleracea)